RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 AP5M1Q9H0R1 490 aa23.18■■□□□ 1.3
PNKP-211ENST00000598020 SMC3Q9UQE7 1217 aa23.18■■□□□ 1.3
PNKP-211ENST00000598020 MEIS1O00470 390 aa23.17■■□□□ 1.3
PNKP-211ENST00000598020 FARP2O94887 1054 aaPredicted RBP23.17■■□□□ 1.3
PNKP-211ENST00000598020 GJB2P29033 226 aa23.17■■□□□ 1.3
PNKP-211ENST00000598020 NONOQ15233 471 aaKnown RBP eCLIP23.17■■□□□ 1.3
PNKP-211ENST00000598020 LY6KQ17RY6 165 aa23.17■■□□□ 1.3
PNKP-211ENST00000598020 GJC2Q5T442 439 aaPredicted RBP23.17■■□□□ 1.3
PNKP-211ENST00000598020 OXER1Q8TDS5 423 aa23.17■■□□□ 1.3
PNKP-211ENST00000598020 SENP7Q9BQF6 1050 aa23.17■■□□□ 1.3
PNKP-211ENST00000598020 EDIL3O43854 480 aa23.16■■□□□ 1.3
PNKP-211ENST00000598020 GH1P01241 217 aa23.16■■□□□ 1.3
PNKP-211ENST00000598020 COL6A1P12109 1028 aa23.16■■□□□ 1.3
PNKP-211ENST00000598020 HSCBQ8IWL3 235 aa23.16■■□□□ 1.3
PNKP-211ENST00000598020 DIS3L2Q8IYB7 885 aaKnown RBP23.16■■□□□ 1.3
PNKP-211ENST00000598020 PCSK9Q8NBP7 692 aaKnown RBP23.16■■□□□ 1.3
PNKP-211ENST00000598020 TBCKQ8TEA7 893 aa23.16■■□□□ 1.3
PNKP-211ENST00000598020 COPS5Q92905 334 aa23.16■■□□□ 1.3
PNKP-211ENST00000598020 CCDC194A0A1B0GVG4 234 aa23.15■■□□□ 1.3
PNKP-211ENST00000598020 MYADML2A6NDP7 307 aa23.15■■□□□ 1.3
PNKP-211ENST00000598020 A6NJR5 290 aa23.15■■□□□ 1.3
PNKP-211ENST00000598020 KBTBD13C9JR72 458 aa23.15■■□□□ 1.3
PNKP-211ENST00000598020 C6orf222P0C671 652 aaPredicted RBP23.15■■□□□ 1.3
PNKP-211ENST00000598020 UBA1P22314 1058 aaKnown RBP23.15■■□□□ 1.3
PNKP-211ENST00000598020 PTGS1P23219 599 aa23.15■■□□□ 1.3
PNKP-211ENST00000598020 SP2Q02086 613 aa23.15■■□□□ 1.3
PNKP-211ENST00000598020 ARHGAP1Q07960 439 aa23.15■■□□□ 1.3
PNKP-211ENST00000598020 MTMR1Q13613 665 aa23.15■■□□□ 1.3
PNKP-211ENST00000598020 LAMC2Q13753 1193 aa23.15■■□□□ 1.3
PNKP-211ENST00000598020 NEDD9Q14511 834 aa23.15■■□□□ 1.3
PNKP-211ENST00000598020 SAFBQ15424 915 aaKnown RBP eCLIP23.15■■□□□ 1.3
PNKP-211ENST00000598020 FSCN1Q16658 493 aaKnown RBP23.15■■□□□ 1.3
PNKP-211ENST00000598020 OR6J1Q8NGC5 347 aa23.15■■□□□ 1.3
PNKP-211ENST00000598020 CYP2W1Q8TAV3 490 aa23.15■■□□□ 1.3
PNKP-211ENST00000598020 PHF24Q9UPV7 400 aa23.15■■□□□ 1.3
PNKP-211ENST00000598020 IGLV3-22A0A075B6J6 115 aa23.14■■□□□ 1.29
PNKP-211ENST00000598020 MOXD2PA6NHM9 499 aa23.14■■□□□ 1.29
PNKP-211ENST00000598020 BTBD18B2RXH4 712 aa23.14■■□□□ 1.29
PNKP-211ENST00000598020 FAM86B1E9PN63 330 aa23.14■■□□□ 1.29
PNKP-211ENST00000598020 CAPN15O75808 1086 aa23.14■■□□□ 1.29
PNKP-211ENST00000598020 FAM86B2P0C5J1 330 aa23.14■■□□□ 1.29
PNKP-211ENST00000598020 ZNF76P36508 570 aa23.14■■□□□ 1.29
PNKP-211ENST00000598020 NR5A1Q13285 461 aa23.14■■□□□ 1.29
PNKP-211ENST00000598020 GNASQ5JWF2 1037 aa23.14■■□□□ 1.29
PNKP-211ENST00000598020 CELF3Q5SZQ8 465 aaKnown RBP23.14■■□□□ 1.29
PNKP-211ENST00000598020 MYSM1Q5VVJ2 828 aa23.14■■□□□ 1.29
PNKP-211ENST00000598020 MOXD1Q6UVY6 613 aa23.14■■□□□ 1.29
PNKP-211ENST00000598020 NECAB2Q7Z6G3 386 aa23.14■■□□□ 1.29
PNKP-211ENST00000598020 GIMAP8Q8ND71 665 aaPredicted RBP23.14■■□□□ 1.29
PNKP-211ENST00000598020 DIS3LQ8TF46 1054 aaKnown RBP23.14■■□□□ 1.29
PNKP-211ENST00000598020 PAWRQ96IZ0 340 aaKnown RBP23.14■■□□□ 1.29
PNKP-211ENST00000598020 KCNH7Q9NS40 1196 aa23.14■■□□□ 1.29
PNKP-211ENST00000598020 CYP3A7-CYP3A51PA0A087WV96 503 aa23.13■■□□□ 1.29
PNKP-211ENST00000598020 CYP3A7P24462 503 aa23.13■■□□□ 1.29
PNKP-211ENST00000598020 CPT1AP50416 773 aa23.13■■□□□ 1.29
PNKP-211ENST00000598020 FOSBP53539 338 aa23.13■■□□□ 1.29
PNKP-211ENST00000598020 KCNA10Q16322 511 aa23.13■■□□□ 1.29
PNKP-211ENST00000598020 DHX37Q8IY37 1157 aaKnown RBP23.13■■□□□ 1.29
PNKP-211ENST00000598020 FOXP1Q9H334 677 aaPredicted RBP23.13■■□□□ 1.29
PNKP-211ENST00000598020 ZEB2O60315 1214 aa23.12■■□□□ 1.29
PNKP-211ENST00000598020 GGPS1O95749 300 aa23.12■■□□□ 1.29
PNKP-211ENST00000598020 KCNA2P16389 499 aa23.12■■□□□ 1.29
PNKP-211ENST00000598020 IRX5P78411 483 aaPredicted RBP23.12■■□□□ 1.29
PNKP-211ENST00000598020 SETQ01105 290 aaPredicted RBP23.12■■□□□ 1.29
PNKP-211ENST00000598020 GUCY1B3Q02153 619 aa23.12■■□□□ 1.29
PNKP-211ENST00000598020 INF2Q27J81 1249 aa23.12■■□□□ 1.29
PNKP-211ENST00000598020 BRDTQ58F21 947 aaPredicted RBP23.12■■□□□ 1.29
PNKP-211ENST00000598020 EARS2Q5JPH6 523 aaKnown RBP23.12■■□□□ 1.29
PNKP-211ENST00000598020 IFFO2Q5TF58 517 aa23.12■■□□□ 1.29
PNKP-211ENST00000598020 METTL7BQ6UX53 244 aa23.12■■□□□ 1.29
PNKP-211ENST00000598020 PIK3AP1Q6ZUJ8 805 aa23.12■■□□□ 1.29
PNKP-211ENST00000598020 MBOAT7Q96N66 472 aa23.12■■□□□ 1.29
PNKP-211ENST00000598020 C11orf49Q9H6J7 331 aa23.12■■□□□ 1.29
PNKP-211ENST00000598020 ATP9AO75110 1047 aa23.11■■□□□ 1.29
PNKP-211ENST00000598020 ARP10275 920 aa23.11■■□□□ 1.29
PNKP-211ENST00000598020 HOXD8P13378 290 aaPredicted RBP23.11■■□□□ 1.29
PNKP-211ENST00000598020 ACLYP53396 1101 aa23.11■■□□□ 1.29
PNKP-211ENST00000598020 BEX3Q00994 111 aa23.11■■□□□ 1.29
PNKP-211ENST00000598020 NEK8Q86SG6 692 aa23.11■■□□□ 1.29
PNKP-211ENST00000598020 PLA2G4DQ86XP0 818 aa23.11■■□□□ 1.29
PNKP-211ENST00000598020 PPTC7Q8NI37 304 aa23.11■■□□□ 1.29
PNKP-211ENST00000598020 LENG9Q96B70 501 aa23.11■■□□□ 1.29
PNKP-211ENST00000598020 NFASCO94856 1347 aa23.1■■□□□ 1.29
PNKP-211ENST00000598020 KPNA6O60684 536 aa23.1■■□□□ 1.29
PNKP-211ENST00000598020 MYCNP04198 464 aaPredicted RBP23.1■■□□□ 1.29
PNKP-211ENST00000598020 ASGR1P07306 291 aa23.1■■□□□ 1.29
PNKP-211ENST00000598020 Q4G0T1 1027 aa23.1■■□□□ 1.29
PNKP-211ENST00000598020 PPP4R3AQ6IN85 833 aa23.1■■□□□ 1.29
PNKP-211ENST00000598020 AFG1LQ8WV93 481 aa23.1■■□□□ 1.29
PNKP-211ENST00000598020 NAP1L4Q99733 375 aaKnown RBP23.1■■□□□ 1.29
PNKP-211ENST00000598020 MLXIPQ9HAP2 919 aa23.1■■□□□ 1.29
PNKP-211ENST00000598020 AGO4Q9HCK5 861 aaKnown RBP23.1■■□□□ 1.29
PNKP-211ENST00000598020 CABYRO75952 493 aa23.09■■□□□ 1.29
PNKP-211ENST00000598020 GCFC2P16383 781 aaKnown RBP23.09■■□□□ 1.29
PNKP-211ENST00000598020 U2AF2P26368 475 aaKnown RBP eCLIP23.09■■□□□ 1.29
PNKP-211ENST00000598020 LARP1BQ659C4 914 aaKnown RBP23.09■■□□□ 1.29
PNKP-211ENST00000598020 BCAS3Q9H6U6 928 aa23.09■■□□□ 1.29
PNKP-211ENST00000598020 POLR3EQ9NVU0 708 aa23.09■■□□□ 1.29
PNKP-211ENST00000598020 ELP1O95163 1332 aa23.08■■□□□ 1.29
PNKP-211ENST00000598020 PPFIA4O75335 1185 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms