RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 MTMR1Q13613 665 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 GNL2Q13823 731 aaKnown RBP9.51□□□□□ -0.89
VRK3-211ENST00000596445 LY6KQ17RY6 165 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 INF2Q27J81 1249 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 EARS2Q5JPH6 523 aaKnown RBP9.51□□□□□ -0.89
VRK3-211ENST00000596445 TMEM63BQ5T3F8 832 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 MCTP1Q6DN14 999 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 MOXD1Q6UVY6 613 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 NEK8Q86SG6 692 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 TLK2Q86UE8 772 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 NOSTRINQ8IVI9 506 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 CYP2W1Q8TAV3 490 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 LENG1Q96BZ8 264 aaPredicted RBP9.51□□□□□ -0.89
VRK3-211ENST00000596445 SENP7Q9BQF6 1050 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 UPF3AQ9H1J1 476 aaKnown RBP9.51□□□□□ -0.89
VRK3-211ENST00000596445 XPNPEP3Q9NQH7 507 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 DDX41Q9UJV9 622 aaKnown RBP9.51□□□□□ -0.89
VRK3-211ENST00000596445 OGDHLQ9ULD0 1010 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 Q9Y3F1 56 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 SYNRGQ9UMZ2 1314 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 POTEFA5A3E0 1075 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 FAM205CA6NFA0 338 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 KIF28PB7ZC32 967 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 PGK1P00558 417 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 GH1P01241 217 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 TFRCP02786 760 aaKnown RBP9.5□□□□□ -0.89
VRK3-211ENST00000596445 PDIA4P13667 645 aaKnown RBP9.5□□□□□ -0.89
VRK3-211ENST00000596445 GCFC2P16383 781 aaKnown RBP9.5□□□□□ -0.89
VRK3-211ENST00000596445 SYT1P21579 422 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 GJA9P57773 515 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 NKX3-2P78367 333 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 SETQ01105 290 aaPredicted RBP9.5□□□□□ -0.89
VRK3-211ENST00000596445 SP2Q02086 613 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 SEMA3FQ13275 785 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 GJC2Q5T442 439 aaPredicted RBP9.5□□□□□ -0.89
VRK3-211ENST00000596445 PLA2G4DQ86XP0 818 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 SPRYD3Q8NCJ5 442 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 ARRDC4Q8NCT1 418 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 GIMAP8Q8ND71 665 aaPredicted RBP9.5□□□□□ -0.89
VRK3-211ENST00000596445 EMID1Q96A84 441 aaPredicted RBP9.5□□□□□ -0.89
VRK3-211ENST00000596445 MBOAT7Q96N66 472 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 NAP1L4Q99733 375 aaKnown RBP9.5□□□□□ -0.89
VRK3-211ENST00000596445 AP5M1Q9H0R1 490 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 SPC25Q9HBM1 224 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 KCNH7Q9NS40 1196 aa9.5□□□□□ -0.89
VRK3-211ENST00000596445 VPS37CA5D8V6 355 aaPredicted RBP9.49□□□□□ -0.89
VRK3-211ENST00000596445 DYNC1LI2O43237 492 aaPredicted RBP9.49□□□□□ -0.89
VRK3-211ENST00000596445 STX6O43752 255 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 CCNT1O60563 726 aaKnown RBP9.49□□□□□ -0.89
VRK3-211ENST00000596445 ADAMTS4O75173 837 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 GGPS1O95749 300 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 C6orf222P0C671 652 aaPredicted RBP9.49□□□□□ -0.89
VRK3-211ENST00000596445 ARP10275 920 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 KCNA2P16389 499 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 UBA1P22314 1058 aaKnown RBP9.49□□□□□ -0.89
VRK3-211ENST00000596445 CST5P28325 142 aaPredicted RBP9.49□□□□□ -0.89
VRK3-211ENST00000596445 ANP32AP39687 249 aaKnown RBP9.49□□□□□ -0.89
VRK3-211ENST00000596445 TRAPPC10P48553 1259 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 ARHGAP1Q07960 439 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 LAMC2Q13753 1193 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 NEDD9Q14511 834 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 LRRC41Q15345 812 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 LETM2Q2VYF4 491 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 Q4G0T1 1027 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 PRR16Q569H4 304 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 CELF3Q5SZQ8 465 aaKnown RBP9.49□□□□□ -0.89
VRK3-211ENST00000596445 MYSM1Q5VVJ2 828 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 PPP4R3AQ6IN85 833 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 RNF180Q86T96 592 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 DHX37Q8IY37 1157 aaKnown RBP9.49□□□□□ -0.89
VRK3-211ENST00000596445 ANKLE1Q8NAG6 615 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 KLHDC9Q8NEP7 349 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 OR6J1Q8NGC5 347 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 COPS5Q92905 334 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 LENG9Q96B70 501 aa9.49□□□□□ -0.89
VRK3-211ENST00000596445 AGO4Q9HCK5 861 aaKnown RBP9.49□□□□□ -0.89
VRK3-211ENST00000596445 DDX25Q9UHL0 483 aaKnown RBP9.49□□□□□ -0.89
VRK3-211ENST00000596445 A6NJR5 290 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 KBTBD13C9JR72 458 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 IPO5O00410 1097 aaKnown RBP9.48□□□□□ -0.89
VRK3-211ENST00000596445 DNM1LO00429 736 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 CTAGE5O15320 804 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 ATP9AO75110 1047 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 TDP2O95551 362 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 EN2P19622 333 aaPredicted RBP9.48□□□□□ -0.89
VRK3-211ENST00000596445 PTGS1P23219 599 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 CPT1AP50416 773 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 FSCN1Q16658 493 aaKnown RBP9.48□□□□□ -0.89
VRK3-211ENST00000596445 BRDTQ58F21 947 aaPredicted RBP9.48□□□□□ -0.89
VRK3-211ENST00000596445 GNASQ5JWF2 1037 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 METTL7BQ6UX53 244 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 CYFIP1Q7L576 1253 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 BRAPQ7Z569 592 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 PPTC7Q8NI37 304 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 SPATA33Q96N06 139 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 SDF4Q9BRK5 362 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 ZNF577Q9BSK1 485 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 TSEN34Q9BSV6 310 aaKnown RBP9.48□□□□□ -0.89
VRK3-211ENST00000596445 BCAS3Q9H6U6 928 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 MLXIPQ9HAP2 919 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms