RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 MYSM1Q5VVJ2 828 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 LRRC8DQ7L1W4 858 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 VSIG10LQ86VR7 867 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 FCHSD1Q86WN1 690 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 PPTC7Q8NI37 304 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 CAGE1Q8TC20 777 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 PHOSPHO2Q8TCD6 241 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 ADAMTS19Q8TE59 1207 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 AFAP1L1Q8TED9 768 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 PIBF1Q8WXW3 757 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 MTCH2Q9Y6C9 303 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 MYH7BA7E2Y1 1941 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 GGPS1O95749 300 aa18.67■□□□□ 0.58
LIM2-202ENST00000596399 F2P00734 622 aa18.67■□□□□ 0.58
LIM2-202ENST00000596399 WDR5P61964 334 aaKnown RBP18.67■□□□□ 0.58
LIM2-202ENST00000596399 CELF3Q5SZQ8 465 aaKnown RBP18.67■□□□□ 0.58
LIM2-202ENST00000596399 TRAF7Q6Q0C0 670 aa18.67■□□□□ 0.58
LIM2-202ENST00000596399 CCDC155Q8N6L0 562 aa18.67■□□□□ 0.58
LIM2-202ENST00000596399 NECAB3Q96P71 396 aaPredicted RBP18.67■□□□□ 0.58
LIM2-202ENST00000596399 RIOX1Q9H6W3 641 aa18.67■□□□□ 0.58
LIM2-202ENST00000596399 E7EWF7 191 aa18.66■□□□□ 0.58
LIM2-202ENST00000596399 UBA1P22314 1058 aaKnown RBP18.66■□□□□ 0.58
LIM2-202ENST00000596399 ANTXR2P58335 489 aa18.66■□□□□ 0.58
LIM2-202ENST00000596399 TRDNQ13061 729 aa18.66■□□□□ 0.58
LIM2-202ENST00000596399 SKIV2LQ15477 1246 aaKnown RBP18.66■□□□□ 0.58
LIM2-202ENST00000596399 TRIM71Q2Q1W2 868 aaKnown RBP18.66■□□□□ 0.58
LIM2-202ENST00000596399 ZNF618Q5T7W0 954 aa18.66■□□□□ 0.58
LIM2-202ENST00000596399 SPATA33Q96N06 139 aa18.66■□□□□ 0.58
LIM2-202ENST00000596399 BAZ2BQ9UIF8 2168 aaKnown RBP18.66■□□□□ 0.58
LIM2-202ENST00000596399 GCOM1H8Y6P7 765 aaPredicted RBP18.65■□□□□ 0.58
LIM2-202ENST00000596399 TLL1O43897 1013 aa18.65■□□□□ 0.58
LIM2-202ENST00000596399 BAIAP3O94812 1187 aa18.65■□□□□ 0.58
LIM2-202ENST00000596399 POLR2MP0CAP2 368 aa18.65■□□□□ 0.58
LIM2-202ENST00000596399 KCNJ6P48051 423 aa18.65■□□□□ 0.58
LIM2-202ENST00000596399 TROAPQ12815 778 aa18.65■□□□□ 0.58
LIM2-202ENST00000596399 MBTPS1Q14703 1052 aa18.65■□□□□ 0.58
LIM2-202ENST00000596399 TELO2Q9Y4R8 837 aa18.65■□□□□ 0.58
LIM2-202ENST00000596399 U3KPZ7 1027 aaPredicted RBP18.65■□□□□ 0.58
LIM2-202ENST00000596399 PRRC2BQ5JSZ5 2229 aaKnown RBP18.65■□□□□ 0.58
LIM2-202ENST00000596399 CXCL10P02778 98 aa18.64■□□□□ 0.57
LIM2-202ENST00000596399 HOXD8P13378 290 aaPredicted RBP18.64■□□□□ 0.57
LIM2-202ENST00000596399 KCNQ1P51787 676 aa18.64■□□□□ 0.57
LIM2-202ENST00000596399 RBL2Q08999 1139 aa18.64■□□□□ 0.57
LIM2-202ENST00000596399 PTK7Q13308 1070 aa18.64■□□□□ 0.57
LIM2-202ENST00000596399 COL9A3Q14050 684 aaPredicted RBP18.64■□□□□ 0.57
LIM2-202ENST00000596399 WTAPQ15007 396 aa18.64■□□□□ 0.57
LIM2-202ENST00000596399 FAM117BQ6P1L5 589 aa18.64■□□□□ 0.57
LIM2-202ENST00000596399 CNKSR3Q6P9H4 555 aa18.64■□□□□ 0.57
LIM2-202ENST00000596399 UHRF1Q96T88 793 aaPredicted RBP18.64■□□□□ 0.57
LIM2-202ENST00000596399 C16orf70Q9BSU1 422 aa18.64■□□□□ 0.57
LIM2-202ENST00000596399 MYL10Q9BUA6 226 aa18.64■□□□□ 0.57
LIM2-202ENST00000596399 KATNAL1Q9BW62 490 aa18.64■□□□□ 0.57
LIM2-202ENST00000596399 BDP1A6H8Y1 2624 aa18.63■□□□□ 0.57
LIM2-202ENST00000596399 TCF20Q9UGU0 1960 aaKnown RBP18.63■□□□□ 0.57
LIM2-202ENST00000596399 PNMA6FA0A0J9YX94 578 aa18.63■□□□□ 0.57
LIM2-202ENST00000596399 KIF28PB7ZC32 967 aa18.63■□□□□ 0.57
LIM2-202ENST00000596399 LPXNO60711 386 aa18.63■□□□□ 0.57
LIM2-202ENST00000596399 PPFIA4O75335 1185 aa18.63■□□□□ 0.57
LIM2-202ENST00000596399 BMP1P13497 986 aa18.63■□□□□ 0.57
LIM2-202ENST00000596399 CCND2P30279 289 aa18.63■□□□□ 0.57
LIM2-202ENST00000596399 MRPS9P82933 396 aaKnown RBP18.63■□□□□ 0.57
LIM2-202ENST00000596399 GRB10Q13322 594 aa18.63■□□□□ 0.57
LIM2-202ENST00000596399 RALYLQ86SE5 291 aaKnown RBP18.63■□□□□ 0.57
LIM2-202ENST00000596399 NCOA7Q8NI08 942 aa18.63■□□□□ 0.57
LIM2-202ENST00000596399 IGDCC4Q8TDY8 1250 aa18.63■□□□□ 0.57
LIM2-202ENST00000596399 ZBED2Q9BTP6 218 aa18.63■□□□□ 0.57
LIM2-202ENST00000596399 MAP3K20Q9NYL2 800 aaKnown RBP18.63■□□□□ 0.57
LIM2-202ENST00000596399 RTEL1Q9NZ71 1219 aa18.63■□□□□ 0.57
LIM2-202ENST00000596399 MTUS1Q9ULD2 1270 aa18.63■□□□□ 0.57
LIM2-202ENST00000596399 SGSM2O43147 1006 aa18.62■□□□□ 0.57
LIM2-202ENST00000596399 GTPBP6O43824 516 aaPredicted RBP18.62■□□□□ 0.57
LIM2-202ENST00000596399 POU3F3P20264 500 aaPredicted RBP18.62■□□□□ 0.57
LIM2-202ENST00000596399 MB21D2Q8IYB1 491 aaPredicted RBP18.62■□□□□ 0.57
LIM2-202ENST00000596399 RUFY2Q8WXA3 655 aa18.62■□□□□ 0.57
LIM2-202ENST00000596399 OSBPL7Q9BZF2 842 aa18.62■□□□□ 0.57
LIM2-202ENST00000596399 TSPYL2Q9H2G4 693 aaPredicted RBP18.62■□□□□ 0.57
LIM2-202ENST00000596399 MLXIPQ9HAP2 919 aa18.62■□□□□ 0.57
LIM2-202ENST00000596399 COL4A4P53420 1690 aaPredicted RBP18.61■□□□□ 0.57
LIM2-202ENST00000596399 ERICH2A1L162 156 aa18.61■□□□□ 0.57
LIM2-202ENST00000596399 THPOP40225 353 aa18.61■□□□□ 0.57
LIM2-202ENST00000596399 SEMA3FQ13275 785 aa18.61■□□□□ 0.57
LIM2-202ENST00000596399 KCNV1Q6PIU1 500 aa18.61■□□□□ 0.57
LIM2-202ENST00000596399 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.61■□□□□ 0.57
LIM2-202ENST00000596399 GDPD5Q8WTR4 605 aa18.61■□□□□ 0.57
LIM2-202ENST00000596399 RAPGEFL1Q9UHV5 662 aa18.61■□□□□ 0.57
LIM2-202ENST00000596399 LGALS2P05162 132 aa18.6■□□□□ 0.57
LIM2-202ENST00000596399 TGFB3P10600 412 aa18.6■□□□□ 0.57
LIM2-202ENST00000596399 USP17L6PQ6QN14 398 aa18.6■□□□□ 0.57
LIM2-202ENST00000596399 CYFIP1Q7L576 1253 aa18.6■□□□□ 0.57
LIM2-202ENST00000596399 CATIPQ7Z7H3 387 aa18.6■□□□□ 0.57
LIM2-202ENST00000596399 CMTR1Q8N1G2 835 aaKnown RBP18.6■□□□□ 0.57
LIM2-202ENST00000596399 SAMD3Q8N6K7 520 aa18.6■□□□□ 0.57
LIM2-202ENST00000596399 IL27Q8NEV9 243 aa18.6■□□□□ 0.57
LIM2-202ENST00000596399 MAP4K1Q92918 833 aa18.6■□□□□ 0.57
LIM2-202ENST00000596399 LY9Q9HBG7 655 aa18.6■□□□□ 0.57
LIM2-202ENST00000596399 RBM8AQ9Y5S9 174 aaKnown RBP18.6■□□□□ 0.57
LIM2-202ENST00000596399 DOCK5Q9H7D0 1870 aa18.6■□□□□ 0.57
LIM2-202ENST00000596399 ABHD14A-ACY1A0A1B0GW23 586 aa18.59■□□□□ 0.57
LIM2-202ENST00000596399 H3BRB1 525 aa18.59■□□□□ 0.57
LIM2-202ENST00000596399 TREHO43280 583 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms