RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 FIBPO43427 364 aa17■□□□□ 0.31
DDX49-204ENST00000595858 MSCO60682 206 aa17■□□□□ 0.31
DDX49-204ENST00000595858 PDIA4P13667 645 aaKnown RBP17■□□□□ 0.31
DDX49-204ENST00000595858 CYP3A7P24462 503 aa17■□□□□ 0.31
DDX49-204ENST00000595858 MTMR1Q13613 665 aa17■□□□□ 0.31
DDX49-204ENST00000595858 LY6KQ17RY6 165 aa17■□□□□ 0.31
DDX49-204ENST00000595858 MOXD1Q6UVY6 613 aa17■□□□□ 0.31
DDX49-204ENST00000595858 CDHR1Q96JP9 859 aa17■□□□□ 0.31
DDX49-204ENST00000595858 GNEQ9Y223 722 aaKnown RBP17■□□□□ 0.31
DDX49-204ENST00000595858 DUSP11O75319 330 aaKnown RBP16.99■□□□□ 0.31
DDX49-204ENST00000595858 TDP2O95551 362 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 GJB1P08034 283 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 ARP10275 920 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 RARBP10826 455 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 PRR16Q569H4 304 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 GJC2Q5T442 439 aaPredicted RBP16.99■□□□□ 0.31
DDX49-204ENST00000595858 KIAA1217Q5T5P2 1943 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 FERMT3Q86UX7 667 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 PLA2G4DQ86XP0 818 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 TNS4Q8IZW8 715 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 LENG1Q96BZ8 264 aaPredicted RBP16.99■□□□□ 0.31
DDX49-204ENST00000595858 ABHD8Q96I13 439 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 DEFB118Q96PH6 123 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 KCNH7Q9NS40 1196 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 NKRFO15226 690 aaKnown RBP eCLIP16.99■□□□□ 0.31
DDX49-204ENST00000595858 PTGS1P23219 599 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 SP2Q02086 613 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 PPP4R3AQ6IN85 833 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 COPS5Q92905 334 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 LENG9Q96B70 501 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 MBOAT7Q96N66 472 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 NAP1L4Q99733 375 aaKnown RBP16.99■□□□□ 0.31
DDX49-204ENST00000595858 TMEM106CQ9BVX2 250 aa16.99■□□□□ 0.31
DDX49-204ENST00000595858 CCNT1O60563 726 aaKnown RBP16.98■□□□□ 0.31
DDX49-204ENST00000595858 GCFC2P16383 781 aaKnown RBP16.98■□□□□ 0.31
DDX49-204ENST00000595858 ATP2B1P20020 1258 aa16.98■□□□□ 0.31
DDX49-204ENST00000595858 Q4G0T1 1027 aa16.98■□□□□ 0.31
DDX49-204ENST00000595858 SENP7Q9BQF6 1050 aa16.98■□□□□ 0.31
DDX49-204ENST00000595858 Q9Y3F1 56 aa16.98■□□□□ 0.31
DDX49-204ENST00000595858 WNT7AO00755 349 aa16.97■□□□□ 0.31
DDX49-204ENST00000595858 DYNC1LI2O43237 492 aaPredicted RBP16.97■□□□□ 0.31
DDX49-204ENST00000595858 ATP9AO75110 1047 aa16.97■□□□□ 0.31
DDX49-204ENST00000595858 SGPL1O95470 568 aa16.97■□□□□ 0.31
DDX49-204ENST00000595858 TRAPPC10P48553 1259 aa16.97■□□□□ 0.31
DDX49-204ENST00000595858 SETQ01105 290 aaPredicted RBP16.97■□□□□ 0.31
DDX49-204ENST00000595858 BRAPQ7Z569 592 aa16.97■□□□□ 0.31
DDX49-204ENST00000595858 DDX25Q9UHL0 483 aaKnown RBP16.97■□□□□ 0.31
DDX49-204ENST00000595858 NOL7Q9UMY1 257 aaKnown RBP16.97■□□□□ 0.31
DDX49-204ENST00000595858 POTEFA5A3E0 1075 aa16.97■□□□□ 0.31
DDX49-204ENST00000595858 KCNA2P16389 499 aa16.97■□□□□ 0.31
DDX49-204ENST00000595858 UBA1P22314 1058 aaKnown RBP16.97■□□□□ 0.31
DDX49-204ENST00000595858 TOB1P50616 345 aaPredicted RBP16.97■□□□□ 0.31
DDX49-204ENST00000595858 RESTQ13127 1097 aa16.97■□□□□ 0.31
DDX49-204ENST00000595858 PKP1Q13835 747 aa16.97■□□□□ 0.31
DDX49-204ENST00000595858 NEDD9Q14511 834 aa16.97■□□□□ 0.31
DDX49-204ENST00000595858 TLK2Q86UE8 772 aa16.97■□□□□ 0.31
DDX49-204ENST00000595858 U2AF1L4Q8WU68 220 aaKnown RBP16.97■□□□□ 0.31
DDX49-204ENST00000595858 BCAS3Q9H6U6 928 aa16.97■□□□□ 0.31
DDX49-204ENST00000595858 AGO4Q9HCK5 861 aaKnown RBP16.97■□□□□ 0.31
DDX49-204ENST00000595858 XPNPEP3Q9NQH7 507 aa16.97■□□□□ 0.31
DDX49-204ENST00000595858 KIAA0100Q14667 2235 aaKnown RBP16.97■□□□□ 0.31
DDX49-204ENST00000595858 BRCA2P51587 3418 aa16.96■□□□□ 0.31
DDX49-204ENST00000595858 SLC37A4O43826 429 aa16.96■□□□□ 0.31
DDX49-204ENST00000595858 PGK1P00558 417 aa16.96■□□□□ 0.31
DDX49-204ENST00000595858 GH1P01241 217 aa16.96■□□□□ 0.31
DDX49-204ENST00000595858 GJA8P48165 433 aa16.96■□□□□ 0.31
DDX49-204ENST00000595858 CELF3Q5SZQ8 465 aaKnown RBP16.96■□□□□ 0.31
DDX49-204ENST00000595858 DHX37Q8IY37 1157 aaKnown RBP16.96■□□□□ 0.31
DDX49-204ENST00000595858 UIMC1Q96RL1 719 aa16.96■□□□□ 0.31
DDX49-204ENST00000595858 CRISPLD2Q9H0B8 497 aa16.96■□□□□ 0.31
DDX49-204ENST00000595858 AP5M1Q9H0R1 490 aa16.96■□□□□ 0.31
DDX49-204ENST00000595858 PKD2L1Q9P0L9 805 aa16.96■□□□□ 0.31
DDX49-204ENST00000595858 SYNRGQ9UMZ2 1314 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 IPO5O00410 1097 aaKnown RBP16.95■□□□□ 0.3
DDX49-204ENST00000595858 GGPS1O95749 300 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 ZSCAN22P10073 491 aaPredicted RBP16.95■□□□□ 0.3
DDX49-204ENST00000595858 GJA9P57773 515 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 ARHGAP1Q07960 439 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 RILPL1Q5EBL4 403 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 TTC38Q5R3I4 469 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 MYSM1Q5VVJ2 828 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 GIMAP8Q8ND71 665 aaPredicted RBP16.95■□□□□ 0.3
DDX49-204ENST00000595858 OR6J1Q8NGC5 347 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 ZNF577Q9BSK1 485 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 UPF3AQ9H1J1 476 aaKnown RBP16.95■□□□□ 0.3
DDX49-204ENST00000595858 ZSCAN16Q9H4T2 348 aaPredicted RBP16.95■□□□□ 0.3
DDX49-204ENST00000595858 OGDHLQ9ULD0 1010 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 MSH4O15457 936 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 ADAMTS4O75173 837 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 TFRCP02786 760 aaKnown RBP16.95■□□□□ 0.3
DDX49-204ENST00000595858 MCM7P33993 719 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 IRX5P78411 483 aaPredicted RBP16.95■□□□□ 0.3
DDX49-204ENST00000595858 ITGB3BPQ13352 177 aaPredicted RBP16.95■□□□□ 0.3
DDX49-204ENST00000595858 LAMC2Q13753 1193 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 ZNF174Q15697 407 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 FOXD4L5Q5VV16 416 aaPredicted RBP16.95■□□□□ 0.3
DDX49-204ENST00000595858 CYFIP1Q7L576 1253 aa16.95■□□□□ 0.3
DDX49-204ENST00000595858 FOXD4L4Q8WXT5 416 aaPredicted RBP16.95■□□□□ 0.3
DDX49-204ENST00000595858 EMID1Q96A84 441 aaPredicted RBP16.95■□□□□ 0.3
DDX49-204ENST00000595858 MLXIPQ9HAP2 919 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms