RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 ERVK-9P63128 1117 aa14.77□□□□□ -0.05
SHKBP1-209ENST00000595803 ERVK-24P63145 666 aa14.77□□□□□ -0.05
SHKBP1-209ENST00000595803 UBXN2AP68543 259 aa14.77□□□□□ -0.05
SHKBP1-209ENST00000595803 TDHQ8IZJ6 230 aa14.77□□□□□ -0.05
SHKBP1-209ENST00000595803 ANKRD13CQ8N6S4 541 aa14.77□□□□□ -0.05
SHKBP1-209ENST00000595803 SHCBP1Q8NEM2 672 aa14.77□□□□□ -0.05
SHKBP1-209ENST00000595803 CRYGNQ8WXF5 182 aa14.77□□□□□ -0.05
SHKBP1-209ENST00000595803 RMDN3Q96TC7 470 aa14.77□□□□□ -0.05
SHKBP1-209ENST00000595803 CSRNP2Q9H175 543 aa14.77□□□□□ -0.05
SHKBP1-209ENST00000595803 A1CFQ9NQ94 594 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-209ENST00000595803 CYP39A1Q9NYL5 469 aa14.77□□□□□ -0.05
SHKBP1-209ENST00000595803 COL20A1Q9P218 1284 aa14.77□□□□□ -0.05
SHKBP1-209ENST00000595803 PFASO15067 1338 aa14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 A0A1B0GVL5 298 aa14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 LONP1P36776 959 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 TXKP42681 527 aa14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 PSMC4P43686 418 aa14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 TMEM266Q2M3C6 531 aa14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 Q4G0T1 1027 aa14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 PRR16Q569H4 304 aa14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 WDR78Q5VTH9 848 aa14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 CAVIN1Q6NZI2 390 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 SHC4Q6S5L8 630 aa14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 POTEDQ86YR6 584 aa14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 NSUN6Q8TEA1 469 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 MBOAT7Q96N66 472 aa14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 GUCD1Q96NT3 240 aa14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 MTMR9Q96QG7 549 aa14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 UNC93B1Q9H1C4 597 aa14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 ZMYND8Q9ULU4 1186 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 TTC28Q96AY4 2481 aa14.76□□□□□ -0.05
SHKBP1-209ENST00000595803 POTEB2H3BUK9 544 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 SLC37A4O43826 429 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 SGPL1O95470 568 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 MYCLP12524 364 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 EIF2AK2P19525 551 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 TECP42680 631 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 GRIN1Q05586 938 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 KCTD2Q14681 263 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 IL17AQ16552 155 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 SPECC1Q5M775 1068 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 RESP18Q5W5W9 173 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 XRRA1Q6P2D8 792 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 PLA2G4DQ86XP0 818 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 C7orf61Q8IZ16 206 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 MMP19Q99542 508 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 MXRA8Q9BRK3 442 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 RAB34Q9BZG1 259 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 PXMP2Q9NR77 195 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 MORF4L1Q9UBU8 362 aa14.75□□□□□ -0.05
SHKBP1-209ENST00000595803 MYH7BA7E2Y1 1941 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 B4DLN1 442 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 TBX3O15119 743 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 FCER1AP12319 257 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 PFKFB1P16118 471 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 HOXD10P28358 340 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 SYKP43405 635 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 NDUFA8P51970 172 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 FAM160A1Q05DH4 1040 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 PGM5Q15124 567 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 PCNX4Q63HM2 1172 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 SLFN12Q8IYM2 578 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 FAM20AQ96MK3 541 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 PURBQ96QR8 312 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 PDCD2LQ9BRP1 358 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 GZF1Q9H116 711 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 GOLPH3LQ9H4A5 285 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 DDX19AQ9NUU7 478 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 DACT1Q9NYF0 836 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 RAPGEFL1Q9UHV5 662 aa14.74□□□□□ -0.05
SHKBP1-209ENST00000595803 FAM86B1E9PN63 330 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 MEIS1O00470 390 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 KINO60870 393 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 NR1I2O75469 434 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 NR3C2P08235 984 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 FAM86B2P0C5J1 330 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 CCND2P30279 289 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 TXLNAP40222 546 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 MAGEA10P43363 369 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 PDIA5Q14554 519 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 CEP55Q53EZ4 464 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 CCDC183Q5T5S1 534 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 C17orf99Q6UX52 265 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 ENGASEQ8NFI3 743 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 DNERQ8NFT8 737 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 ZFP91Q96JP5 570 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 IWS1Q96ST2 819 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 MPHOSPH6Q99547 160 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 TTC12Q9H892 705 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 ADD3Q9UEY8 706 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 CPA4Q9UI42 421 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 KCNH3Q9ULD8 1083 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 PCDHA12Q9UN75 941 aa14.73□□□□□ -0.05
SHKBP1-209ENST00000595803 A0A0G2JMZ2 1700 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 FRMPD4Q14CM0 1322 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 FAM237AA0A1B0GTK4 181 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 STRNO43815 780 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 ZNF202O95125 648 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 LETM1O95202 739 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms