RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 DNM1LO00429 736 aa12.78□□□□□ -0.36
XRCC1-204ENST00000594511 MYCP01106 439 aaPredicted RBP12.78□□□□□ -0.36
XRCC1-204ENST00000594511 TFRCP02786 760 aaKnown RBP12.78□□□□□ -0.36
XRCC1-204ENST00000594511 FAM86B2P0C5J1 330 aa12.78□□□□□ -0.36
XRCC1-204ENST00000594511 KRT2P35908 639 aa12.78□□□□□ -0.36
XRCC1-204ENST00000594511 NONOQ15233 471 aaKnown RBP eCLIP12.78□□□□□ -0.36
XRCC1-204ENST00000594511 EARS2Q5JPH6 523 aaKnown RBP12.78□□□□□ -0.36
XRCC1-204ENST00000594511 CELF3Q5SZQ8 465 aaKnown RBP12.78□□□□□ -0.36
XRCC1-204ENST00000594511 MYSM1Q5VVJ2 828 aa12.78□□□□□ -0.36
XRCC1-204ENST00000594511 SEPT14Q6ZU15 432 aa12.78□□□□□ -0.36
XRCC1-204ENST00000594511 TLK2Q86UE8 772 aa12.78□□□□□ -0.36
XRCC1-204ENST00000594511 NLRX1Q86UT6 975 aa12.78□□□□□ -0.36
XRCC1-204ENST00000594511 DIS3L2Q8IYB7 885 aaKnown RBP12.78□□□□□ -0.36
XRCC1-204ENST00000594511 FAM184AQ8NB25 1140 aa12.78□□□□□ -0.36
XRCC1-204ENST00000594511 CYP2W1Q8TAV3 490 aa12.78□□□□□ -0.36
XRCC1-204ENST00000594511 TBCKQ8TEA7 893 aa12.78□□□□□ -0.36
XRCC1-204ENST00000594511 RTEL1Q9NZ71 1219 aa12.78□□□□□ -0.36
XRCC1-204ENST00000594511 PHF24Q9UPV7 400 aa12.78□□□□□ -0.36
XRCC1-204ENST00000594511 SMC3Q9UQE7 1217 aa12.78□□□□□ -0.36
XRCC1-204ENST00000594511 DYNC1LI2O43237 492 aaPredicted RBP12.77□□□□□ -0.37
XRCC1-204ENST00000594511 ATP9AO75110 1047 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 PGK1P00558 417 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 GH1P01241 217 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 KCNA2P16389 499 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 NR5A1Q13285 461 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 LAMC2Q13753 1193 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 TRIM29Q14134 588 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 NEDD9Q14511 834 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 LY6KQ17RY6 165 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 Q4G0T1 1027 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 GJC2Q5T442 439 aaPredicted RBP12.77□□□□□ -0.37
XRCC1-204ENST00000594511 ANO1Q5XXA6 986 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 PPP4R3AQ6IN85 833 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 RNF180Q86T96 592 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 GIMAP8Q8ND71 665 aaPredicted RBP12.77□□□□□ -0.37
XRCC1-204ENST00000594511 COPS5Q92905 334 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 LENG1Q96BZ8 264 aaPredicted RBP12.77□□□□□ -0.37
XRCC1-204ENST00000594511 BRMS1Q9HCU9 246 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 KCNH7Q9NS40 1196 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 MRVI1Q9Y6F6 885 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 NFASCO94856 1347 aa12.77□□□□□ -0.37
XRCC1-204ENST00000594511 MYADML2A6NDP7 307 aa12.76□□□□□ -0.37
XRCC1-204ENST00000594511 MOXD2PA6NHM9 499 aa12.76□□□□□ -0.37
XRCC1-204ENST00000594511 DHX15O43143 795 aaKnown RBP12.76□□□□□ -0.37
XRCC1-204ENST00000594511 KPNA6O60684 536 aa12.76□□□□□ -0.37
XRCC1-204ENST00000594511 ARP10275 920 aa12.76□□□□□ -0.37
XRCC1-204ENST00000594511 GCFC2P16383 781 aaKnown RBP12.76□□□□□ -0.37
XRCC1-204ENST00000594511 UBA1P22314 1058 aaKnown RBP12.76□□□□□ -0.37
XRCC1-204ENST00000594511 PTGS1P23219 599 aa12.76□□□□□ -0.37
XRCC1-204ENST00000594511 SOX10P56693 466 aa12.76□□□□□ -0.37
XRCC1-204ENST00000594511 C1orf53Q5VUE5 145 aa12.76□□□□□ -0.37
XRCC1-204ENST00000594511 HSCBQ8IWL3 235 aa12.76□□□□□ -0.37
XRCC1-204ENST00000594511 PPTC7Q8NI37 304 aa12.76□□□□□ -0.37
XRCC1-204ENST00000594511 ZFP91Q96JP5 570 aaPredicted RBP12.76□□□□□ -0.37
XRCC1-204ENST00000594511 BCAS3Q9H6U6 928 aa12.76□□□□□ -0.37
XRCC1-204ENST00000594511 SPC25Q9HBM1 224 aa12.76□□□□□ -0.37
XRCC1-204ENST00000594511 AGO4Q9HCK5 861 aaKnown RBP12.76□□□□□ -0.37
XRCC1-204ENST00000594511 CCDC194A0A1B0GVG4 234 aa12.75□□□□□ -0.37
XRCC1-204ENST00000594511 PPFIA4O75335 1185 aa12.75□□□□□ -0.37
XRCC1-204ENST00000594511 FARP2O94887 1054 aaPredicted RBP12.75□□□□□ -0.37
XRCC1-204ENST00000594511 ATG7O95352 703 aa12.75□□□□□ -0.37
XRCC1-204ENST00000594511 PDIA4P13667 645 aaKnown RBP12.75□□□□□ -0.37
XRCC1-204ENST00000594511 IRX5P78411 483 aaPredicted RBP12.75□□□□□ -0.37
XRCC1-204ENST00000594511 SETQ01105 290 aaPredicted RBP12.75□□□□□ -0.37
XRCC1-204ENST00000594511 MTMR1Q13613 665 aa12.75□□□□□ -0.37
XRCC1-204ENST00000594511 SNX17Q15036 470 aa12.75□□□□□ -0.37
XRCC1-204ENST00000594511 SAFBQ15424 915 aaKnown RBP eCLIP12.75□□□□□ -0.37
XRCC1-204ENST00000594511 KCNA10Q16322 511 aa12.75□□□□□ -0.37
XRCC1-204ENST00000594511 FSCN1Q16658 493 aaKnown RBP12.75□□□□□ -0.37
XRCC1-204ENST00000594511 INF2Q27J81 1249 aa12.75□□□□□ -0.37
XRCC1-204ENST00000594511 LARP1BQ659C4 914 aaKnown RBP12.75□□□□□ -0.37
XRCC1-204ENST00000594511 METTL7BQ6UX53 244 aa12.75□□□□□ -0.37
XRCC1-204ENST00000594511 B3GNT9Q6UX72 402 aa12.75□□□□□ -0.37
XRCC1-204ENST00000594511 PIK3AP1Q6ZUJ8 805 aa12.75□□□□□ -0.37
XRCC1-204ENST00000594511 NEK8Q86SG6 692 aa12.75□□□□□ -0.37
XRCC1-204ENST00000594511 DHX37Q8IY37 1157 aaKnown RBP12.75□□□□□ -0.37
XRCC1-204ENST00000594511 SLC43A3Q8NBI5 491 aa12.75□□□□□ -0.37
XRCC1-204ENST00000594511 PCSK9Q8NBP7 692 aaKnown RBP12.75□□□□□ -0.37
XRCC1-204ENST00000594511 NAP1L4Q99733 375 aaKnown RBP12.75□□□□□ -0.37
XRCC1-204ENST00000594511 AP5M1Q9H0R1 490 aa12.75□□□□□ -0.37
XRCC1-204ENST00000594511 ELP1O95163 1332 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 FAM205CA6NFA0 338 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 KIF28PB7ZC32 967 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 TBX3O15119 743 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 CABYRO75952 493 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 GGPS1O95749 300 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 C6orf222P0C671 652 aaPredicted RBP12.74□□□□□ -0.37
XRCC1-204ENST00000594511 PDCP20941 246 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 TRAPPC10P48553 1259 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 CPT1AP50416 773 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 ACLYP53396 1101 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 GUCY1B3Q02153 619 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 ITGB3BPQ13352 177 aaPredicted RBP12.74□□□□□ -0.37
XRCC1-204ENST00000594511 ORC2Q13416 577 aaPredicted RBP12.74□□□□□ -0.37
XRCC1-204ENST00000594511 GNASQ5JWF2 1037 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 NECAB2Q7Z6G3 386 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 PLA2G4DQ86XP0 818 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 NOSTRINQ8IVI9 506 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 OR6J1Q8NGC5 347 aa12.74□□□□□ -0.37
XRCC1-204ENST00000594511 ETNPPLQ8TBG4 499 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms