RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 MTCH2Q9Y6C9 303 aa26.28■■□□□ 1.8
SSBP4-203ENST00000593641 GCOM1H8Y6P7 765 aaPredicted RBP26.27■■□□□ 1.8
SSBP4-203ENST00000593641 IFIT3O14879 490 aaKnown RBP26.27■■□□□ 1.8
SSBP4-203ENST00000593641 POLR2MP0CAP2 368 aa26.27■■□□□ 1.8
SSBP4-203ENST00000593641 PTK7Q13308 1070 aa26.27■■□□□ 1.8
SSBP4-203ENST00000593641 GRM4Q14833 912 aa26.27■■□□□ 1.8
SSBP4-203ENST00000593641 SART3Q15020 963 aaKnown RBP26.27■■□□□ 1.8
SSBP4-203ENST00000593641 RALYLQ86SE5 291 aaKnown RBP26.27■■□□□ 1.8
SSBP4-203ENST00000593641 SPATA33Q96N06 139 aa26.27■■□□□ 1.8
SSBP4-203ENST00000593641 ZBED2Q9BTP6 218 aa26.27■■□□□ 1.8
SSBP4-203ENST00000593641 EPOPA6NHQ4 379 aa26.26■■□□□ 1.79
SSBP4-203ENST00000593641 HAS3O00219 553 aa26.26■■□□□ 1.79
SSBP4-203ENST00000593641 PPFIA4O75335 1185 aa26.26■■□□□ 1.79
SSBP4-203ENST00000593641 RGS20O76081 388 aa26.26■■□□□ 1.79
SSBP4-203ENST00000593641 GGPS1O95749 300 aa26.26■■□□□ 1.79
SSBP4-203ENST00000593641 CXCL10P02778 98 aa26.26■■□□□ 1.79
SSBP4-203ENST00000593641 CYP21A2P08686 494 aa26.26■■□□□ 1.79
SSBP4-203ENST00000593641 CCND2P30279 289 aa26.26■■□□□ 1.79
SSBP4-203ENST00000593641 CELF3Q5SZQ8 465 aaKnown RBP26.26■■□□□ 1.79
SSBP4-203ENST00000593641 MYSM1Q5VVJ2 828 aa26.26■■□□□ 1.79
SSBP4-203ENST00000593641 VSIG10LQ86VR7 867 aa26.26■■□□□ 1.79
SSBP4-203ENST00000593641 PIGSQ96S52 555 aa26.26■■□□□ 1.79
SSBP4-203ENST00000593641 RIOX1Q9H6W3 641 aa26.26■■□□□ 1.79
SSBP4-203ENST00000593641 BDP1A6H8Y1 2624 aa26.25■■□□□ 1.79
SSBP4-203ENST00000593641 SORBS3O60504 671 aa26.25■■□□□ 1.79
SSBP4-203ENST00000593641 NBNO60934 754 aa26.25■■□□□ 1.79
SSBP4-203ENST00000593641 TGFB3P10600 412 aa26.25■■□□□ 1.79
SSBP4-203ENST00000593641 HOXD8P13378 290 aaPredicted RBP26.25■■□□□ 1.79
SSBP4-203ENST00000593641 PDE4AP27815 886 aa26.25■■□□□ 1.79
SSBP4-203ENST00000593641 GPNMBQ14956 572 aa26.25■■□□□ 1.79
SSBP4-203ENST00000593641 WTAPQ15007 396 aa26.25■■□□□ 1.79
SSBP4-203ENST00000593641 HSDL1Q3SXM5 330 aa26.25■■□□□ 1.79
SSBP4-203ENST00000593641 FCHSD1Q86WN1 690 aa26.25■■□□□ 1.79
SSBP4-203ENST00000593641 COL4A4P53420 1690 aaPredicted RBP26.25■■□□□ 1.79
SSBP4-203ENST00000593641 EFCAB14O75071 495 aa26.24■■□□□ 1.79
SSBP4-203ENST00000593641 ARHGEF15O94989 841 aa26.24■■□□□ 1.79
SSBP4-203ENST00000593641 UBA1P22314 1058 aaKnown RBP26.24■■□□□ 1.79
SSBP4-203ENST00000593641 NCOA7Q8NI08 942 aa26.24■■□□□ 1.79
SSBP4-203ENST00000593641 IL31RAQ8NI17 732 aa26.24■■□□□ 1.79
SSBP4-203ENST00000593641 MLXIPQ9HAP2 919 aa26.24■■□□□ 1.79
SSBP4-203ENST00000593641 BRWD1Q9NSI6 2320 aa26.23■■□□□ 1.79
SSBP4-203ENST00000593641 PNMA6FA0A0J9YX94 578 aa26.23■■□□□ 1.79
SSBP4-203ENST00000593641 ABHD14A-ACY1A0A1B0GW23 586 aa26.23■■□□□ 1.79
SSBP4-203ENST00000593641 DEFB103AP81534 67 aa26.23■■□□□ 1.79
SSBP4-203ENST00000593641 TFF2Q03403 129 aa26.23■■□□□ 1.79
SSBP4-203ENST00000593641 MICAL3Q7RTP6 2002 aa26.22■■□□□ 1.79
SSBP4-203ENST00000593641 PTH1RQ03431 593 aa26.22■■□□□ 1.79
SSBP4-203ENST00000593641 IKBKEQ14164 716 aa26.22■■□□□ 1.79
SSBP4-203ENST00000593641 GNPTABQ3T906 1256 aa26.22■■□□□ 1.79
SSBP4-203ENST00000593641 TMCO2Q7Z6W1 182 aaPredicted RBP26.22■■□□□ 1.79
SSBP4-203ENST00000593641 CATIPQ7Z7H3 387 aa26.22■■□□□ 1.79
SSBP4-203ENST00000593641 KAT6AQ92794 2004 aa26.21■■□□□ 1.79
SSBP4-203ENST00000593641 CYTH3O43739 400 aa26.21■■□□□ 1.79
SSBP4-203ENST00000593641 CHMLP26374 656 aa26.21■■□□□ 1.79
SSBP4-203ENST00000593641 ZNF200P98182 395 aaPredicted RBP26.21■■□□□ 1.79
SSBP4-203ENST00000593641 TROAPQ12815 778 aa26.21■■□□□ 1.79
SSBP4-203ENST00000593641 GRB10Q13322 594 aa26.21■■□□□ 1.79
SSBP4-203ENST00000593641 SLC35G1Q2M3R5 365 aa26.21■■□□□ 1.79
SSBP4-203ENST00000593641 TRIM71Q2Q1W2 868 aaKnown RBP26.21■■□□□ 1.79
SSBP4-203ENST00000593641 ZNF618Q5T7W0 954 aa26.21■■□□□ 1.79
SSBP4-203ENST00000593641 KRT40Q6A162 431 aa26.21■■□□□ 1.79
SSBP4-203ENST00000593641 SENP2Q9HC62 589 aa26.21■■□□□ 1.79
SSBP4-203ENST00000593641 COG5Q9UP83 839 aa26.21■■□□□ 1.79
SSBP4-203ENST00000593641 DOCK5Q9H7D0 1870 aa26.21■■□□□ 1.79
SSBP4-203ENST00000593641 EMSYQ7Z589 1322 aa26.2■■□□□ 1.79
SSBP4-203ENST00000593641 LCHNA4D1U4 455 aa26.2■■□□□ 1.78
SSBP4-203ENST00000593641 E7EWF7 191 aa26.2■■□□□ 1.78
SSBP4-203ENST00000593641 NOP56O00567 594 aaKnown RBP26.2■■□□□ 1.78
SSBP4-203ENST00000593641 GJB5O95377 273 aa26.2■■□□□ 1.78
SSBP4-203ENST00000593641 SP2Q02086 613 aa26.2■■□□□ 1.78
SSBP4-203ENST00000593641 WNT8BQ93098 351 aa26.2■■□□□ 1.78
SSBP4-203ENST00000593641 ZFP91Q96JP5 570 aaPredicted RBP26.2■■□□□ 1.78
SSBP4-203ENST00000593641 SIP14410 1827 aa26.2■■□□□ 1.78
SSBP4-203ENST00000593641 STAM2O75886 525 aa26.19■■□□□ 1.78
SSBP4-203ENST00000593641 THPOP40225 353 aa26.19■■□□□ 1.78
SSBP4-203ENST00000593641 GPKOWQ92917 476 aaPredicted RBP eCLIP26.19■■□□□ 1.78
SSBP4-203ENST00000593641 RAD9AQ99638 391 aa26.19■■□□□ 1.78
SSBP4-203ENST00000593641 C16orf70Q9BSU1 422 aa26.19■■□□□ 1.78
SSBP4-203ENST00000593641 C17orf102A2RUQ5 167 aa26.18■■□□□ 1.78
SSBP4-203ENST00000593641 LGR5O75473 907 aa26.18■■□□□ 1.78
SSBP4-203ENST00000593641 BMP1P13497 986 aa26.18■■□□□ 1.78
SSBP4-203ENST00000593641 KCNQ1P51787 676 aa26.18■■□□□ 1.78
SSBP4-203ENST00000593641 TRAF7Q6Q0C0 670 aa26.18■■□□□ 1.78
SSBP4-203ENST00000593641 SPRED2Q7Z698 418 aa26.18■■□□□ 1.78
SSBP4-203ENST00000593641 SERINC5Q86VE9 423 aa26.18■■□□□ 1.78
SSBP4-203ENST00000593641 PIBF1Q8WXW3 757 aa26.18■■□□□ 1.78
SSBP4-203ENST00000593641 ATP6V0A1Q93050 837 aa26.18■■□□□ 1.78
SSBP4-203ENST00000593641 H3BRB1 525 aa26.17■■□□□ 1.78
SSBP4-203ENST00000593641 LGALS2P05162 132 aa26.17■■□□□ 1.78
SSBP4-203ENST00000593641 NEDD9Q14511 834 aa26.17■■□□□ 1.78
SSBP4-203ENST00000593641 HIC1Q14526 733 aa26.17■■□□□ 1.78
SSBP4-203ENST00000593641 MBTPS1Q14703 1052 aa26.17■■□□□ 1.78
SSBP4-203ENST00000593641 TCTN1Q2MV58 587 aa26.17■■□□□ 1.78
SSBP4-203ENST00000593641 GDPD5Q8WTR4 605 aa26.17■■□□□ 1.78
SSBP4-203ENST00000593641 NECAB3Q96P71 396 aaPredicted RBP26.17■■□□□ 1.78
SSBP4-203ENST00000593641 TUT1Q9H6E5 874 aaKnown RBP26.17■■□□□ 1.78
SSBP4-203ENST00000593641 TAF6LQ9Y6J9 622 aa26.17■■□□□ 1.78
SSBP4-203ENST00000593641 FRMPD4Q14CM0 1322 aa26.16■■□□□ 1.78
SSBP4-203ENST00000593641 RSPH10B2B2RC85 870 aa26.16■■□□□ 1.78
SSBP4-203ENST00000593641 SGSM2O43147 1006 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms