RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 SCN10AQ9Y5Y9 1956 aa18.64■□□□□ 0.58
CIRBP-241ENST00000593048 PPFIA4O75335 1185 aa18.64■□□□□ 0.57
CIRBP-241ENST00000593048 RGS20O76081 388 aa18.64■□□□□ 0.57
CIRBP-241ENST00000593048 ZNF286BP0CG31 522 aa18.64■□□□□ 0.57
CIRBP-241ENST00000593048 MFSD10Q14728 455 aa18.64■□□□□ 0.57
CIRBP-241ENST00000593048 KIAA0753Q2KHM9 967 aa18.64■□□□□ 0.57
CIRBP-241ENST00000593048 GNPTABQ3T906 1256 aa18.64■□□□□ 0.57
CIRBP-241ENST00000593048 CREB3L3Q68CJ9 461 aa18.64■□□□□ 0.57
CIRBP-241ENST00000593048 SMARCC2Q8TAQ2 1214 aa18.64■□□□□ 0.57
CIRBP-241ENST00000593048 VWCEQ96DN2 955 aa18.64■□□□□ 0.57
CIRBP-241ENST00000593048 SPZ1Q9BXG8 430 aa18.64■□□□□ 0.57
CIRBP-241ENST00000593048 GTF2IRD1Q9UHL9 959 aa18.64■□□□□ 0.57
CIRBP-241ENST00000593048 SH2B2O14492 632 aaPredicted RBP18.63■□□□□ 0.57
CIRBP-241ENST00000593048 CALM1P0DP23 149 aa18.63■□□□□ 0.57
CIRBP-241ENST00000593048 CALM2P0DP24 149 aa18.63■□□□□ 0.57
CIRBP-241ENST00000593048 CALM3P0DP25 149 aa18.63■□□□□ 0.57
CIRBP-241ENST00000593048 UBA1P22314 1058 aaKnown RBP18.63■□□□□ 0.57
CIRBP-241ENST00000593048 SMARCA1P28370 1054 aa18.63■□□□□ 0.57
CIRBP-241ENST00000593048 AFAP1L1Q8TED9 768 aa18.63■□□□□ 0.57
CIRBP-241ENST00000593048 YBX2Q9Y2T7 364 aaKnown RBP18.63■□□□□ 0.57
CIRBP-241ENST00000593048 PCDHA11Q9Y5I1 949 aa18.63■□□□□ 0.57
CIRBP-241ENST00000593048 SLC12A7Q9Y666 1083 aa18.63■□□□□ 0.57
CIRBP-241ENST00000593048 STAM2O75886 525 aa18.62■□□□□ 0.57
CIRBP-241ENST00000593048 F2P00734 622 aa18.62■□□□□ 0.57
CIRBP-241ENST00000593048 IGFBP4P22692 258 aa18.62■□□□□ 0.57
CIRBP-241ENST00000593048 LIFRP42702 1097 aa18.62■□□□□ 0.57
CIRBP-241ENST00000593048 SP2Q02086 613 aa18.62■□□□□ 0.57
CIRBP-241ENST00000593048 NECTIN1Q15223 517 aa18.62■□□□□ 0.57
CIRBP-241ENST00000593048 HSDL1Q3SXM5 330 aa18.62■□□□□ 0.57
CIRBP-241ENST00000593048 RNF20Q5VTR2 975 aa18.62■□□□□ 0.57
CIRBP-241ENST00000593048 PPP2R2DQ66LE6 453 aa18.62■□□□□ 0.57
CIRBP-241ENST00000593048 PPM1EQ8WY54 764 aa18.62■□□□□ 0.57
CIRBP-241ENST00000593048 GPKOWQ92917 476 aaPredicted RBP eCLIP18.62■□□□□ 0.57
CIRBP-241ENST00000593048 RTEL1Q9NZ71 1219 aa18.62■□□□□ 0.57
CIRBP-241ENST00000593048 NOP56O00567 594 aaKnown RBP18.61■□□□□ 0.57
CIRBP-241ENST00000593048 PLEKHA8P1O95397 391 aa18.61■□□□□ 0.57
CIRBP-241ENST00000593048 MYOGP15173 224 aa18.61■□□□□ 0.57
CIRBP-241ENST00000593048 SELPP16109 830 aa18.61■□□□□ 0.57
CIRBP-241ENST00000593048 RXRAP19793 462 aa18.61■□□□□ 0.57
CIRBP-241ENST00000593048 BMP2KLQ5H9B9 411 aa18.61■□□□□ 0.57
CIRBP-241ENST00000593048 USP17L6PQ6QN14 398 aa18.61■□□□□ 0.57
CIRBP-241ENST00000593048 SYNE3Q6ZMZ3 975 aa18.61■□□□□ 0.57
CIRBP-241ENST00000593048 CMTR1Q8N1G2 835 aaKnown RBP18.61■□□□□ 0.57
CIRBP-241ENST00000593048 SRBD1Q8N5C6 995 aaKnown RBP18.61■□□□□ 0.57
CIRBP-241ENST00000593048 SLC9A7Q96T83 725 aa18.61■□□□□ 0.57
CIRBP-241ENST00000593048 LRRC2Q9BYS8 371 aa18.61■□□□□ 0.57
CIRBP-241ENST00000593048 MUC3AQ02505 3323 aa18.61■□□□□ 0.57
CIRBP-241ENST00000593048 KIAA1217Q5T5P2 1943 aa18.61■□□□□ 0.57
CIRBP-241ENST00000593048 KIF28PB7ZC32 967 aa18.6■□□□□ 0.57
CIRBP-241ENST00000593048 HAS3O00219 553 aa18.6■□□□□ 0.57
CIRBP-241ENST00000593048 PARNO95453 639 aaKnown RBP18.6■□□□□ 0.57
CIRBP-241ENST00000593048 KCNJ6P48051 423 aa18.6■□□□□ 0.57
CIRBP-241ENST00000593048 MRPS9P82933 396 aaKnown RBP18.6■□□□□ 0.57
CIRBP-241ENST00000593048 NEDD9Q14511 834 aa18.6■□□□□ 0.57
CIRBP-241ENST00000593048 LRRC8DQ7L1W4 858 aa18.6■□□□□ 0.57
CIRBP-241ENST00000593048 RAB11FIP4Q86YS3 637 aa18.6■□□□□ 0.57
CIRBP-241ENST00000593048 CCDC82Q8N4S0 544 aa18.6■□□□□ 0.57
CIRBP-241ENST00000593048 PHOSPHO2Q8TCD6 241 aa18.6■□□□□ 0.57
CIRBP-241ENST00000593048 BAIAP3O94812 1187 aa18.59■□□□□ 0.57
CIRBP-241ENST00000593048 CKBP12277 381 aa18.59■□□□□ 0.57
CIRBP-241ENST00000593048 HOXD8P13378 290 aaPredicted RBP18.59■□□□□ 0.57
CIRBP-241ENST00000593048 PTK7Q13308 1070 aa18.59■□□□□ 0.57
CIRBP-241ENST00000593048 CYFIP1Q7L576 1253 aa18.59■□□□□ 0.57
CIRBP-241ENST00000593048 SKAP1Q86WV1 359 aa18.59■□□□□ 0.57
CIRBP-241ENST00000593048 FANCBQ8NB91 859 aa18.59■□□□□ 0.57
CIRBP-241ENST00000593048 DHX38Q92620 1227 aaKnown RBP18.59■□□□□ 0.57
CIRBP-241ENST00000593048 CTAGE1Q96RT6 745 aa18.59■□□□□ 0.57
CIRBP-241ENST00000593048 PSTPIP2Q9H939 334 aa18.59■□□□□ 0.57
CIRBP-241ENST00000593048 BAZ2BQ9UIF8 2168 aaKnown RBP18.59■□□□□ 0.57
CIRBP-241ENST00000593048 MYO9BQ13459 2157 aa18.58■□□□□ 0.57
CIRBP-241ENST00000593048 FRMPD4Q14CM0 1322 aa18.58■□□□□ 0.57
CIRBP-241ENST00000593048 H3BRB1 525 aa18.58■□□□□ 0.56
CIRBP-241ENST00000593048 PIK3CDO00329 1044 aa18.58■□□□□ 0.56
CIRBP-241ENST00000593048 FIBPO43427 364 aa18.58■□□□□ 0.56
CIRBP-241ENST00000593048 ICAM3P32942 547 aa18.58■□□□□ 0.56
CIRBP-241ENST00000593048 ZNF200P98182 395 aaPredicted RBP18.58■□□□□ 0.56
CIRBP-241ENST00000593048 XRRA1Q6P2D8 792 aa18.58■□□□□ 0.56
CIRBP-241ENST00000593048 NLRX1Q86UT6 975 aa18.58■□□□□ 0.56
CIRBP-241ENST00000593048 MICU3Q86XE3 530 aa18.58■□□□□ 0.56
CIRBP-241ENST00000593048 USP38Q8NB14 1042 aa18.58■□□□□ 0.56
CIRBP-241ENST00000593048 INPP4AQ96PE3 977 aaPredicted RBP18.58■□□□□ 0.56
CIRBP-241ENST00000593048 TUT1Q9H6E5 874 aaKnown RBP18.58■□□□□ 0.56
CIRBP-241ENST00000593048 SPATA31C2B4DYI2 1134 aa18.57■□□□□ 0.56
CIRBP-241ENST00000593048 MEIS2O14770 477 aa18.57■□□□□ 0.56
CIRBP-241ENST00000593048 CA3P07451 260 aa18.57■□□□□ 0.56
CIRBP-241ENST00000593048 COL9A3Q14050 684 aaPredicted RBP18.57■□□□□ 0.56
CIRBP-241ENST00000593048 CCDC85BQ15834 202 aaPredicted RBP18.57■□□□□ 0.56
CIRBP-241ENST00000593048 PCNX4Q63HM2 1172 aa18.57■□□□□ 0.56
CIRBP-241ENST00000593048 METTL7BQ6UX53 244 aa18.57■□□□□ 0.56
CIRBP-241ENST00000593048 NEK1Q96PY6 1258 aa18.57■□□□□ 0.56
CIRBP-241ENST00000593048 C16orf70Q9BSU1 422 aa18.57■□□□□ 0.56
CIRBP-241ENST00000593048 USP26Q9BXU7 913 aa18.57■□□□□ 0.56
CIRBP-241ENST00000593048 BCAS3Q9H6U6 928 aa18.57■□□□□ 0.56
CIRBP-241ENST00000593048 hCG_1642624A0A1W2PR95 340 aa18.56■□□□□ 0.56
CIRBP-241ENST00000593048 C17orf102A2RUQ5 167 aa18.56■□□□□ 0.56
CIRBP-241ENST00000593048 LGALS2P05162 132 aa18.56■□□□□ 0.56
CIRBP-241ENST00000593048 RBL2Q08999 1139 aa18.56■□□□□ 0.56
CIRBP-241ENST00000593048 ADGRE1Q14246 886 aa18.56■□□□□ 0.56
CIRBP-241ENST00000593048 CNKSR3Q6P9H4 555 aa18.56■□□□□ 0.56
CIRBP-241ENST00000593048 SGMS1Q86VZ5 419 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms