RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 CAPN15O75808 1086 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 FAM86B2P0C5J1 330 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 TGFB3P10600 412 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 CAPN2P17655 700 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 CIITAP33076 1130 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 USP11P51784 963 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 ARHGAP1Q07960 439 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 NONOQ15233 471 aaKnown RBP eCLIP11.33□□□□□ -0.6
TPM4-216ENST00000592822 LRRC41Q15345 812 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 INF2Q27J81 1249 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 CEP55Q53EZ4 464 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 KCNV1Q6PIU1 500 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 PIK3AP1Q6ZUJ8 805 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 UBE2Q1Q7Z7E8 422 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 TLK2Q86UE8 772 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 NLRX1Q86UT6 975 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 ANKLE1Q8NAG6 615 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 ARRDC4Q8NCT1 418 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 KLHDC9Q8NEP7 349 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 TBCKQ8TEA7 893 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 GPRASP2Q96D09 838 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 BCAS3Q9H6U6 928 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 BRMS1Q9HCU9 246 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 KIF3AQ9Y496 699 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 DNAH12Q6ZR08 3092 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 DNM1LO00429 736 aa11.32□□□□□ -0.6
TPM4-216ENST00000592822 ATP9AO75110 1047 aa11.32□□□□□ -0.6
TPM4-216ENST00000592822 GH1P01241 217 aa11.32□□□□□ -0.6
TPM4-216ENST00000592822 MYCNP04198 464 aaPredicted RBP11.32□□□□□ -0.6
TPM4-216ENST00000592822 C6orf222P0C671 652 aaPredicted RBP11.32□□□□□ -0.6
TPM4-216ENST00000592822 ARP10275 920 aa11.32□□□□□ -0.6
TPM4-216ENST00000592822 UBA1P22314 1058 aaKnown RBP11.32□□□□□ -0.6
TPM4-216ENST00000592822 ZNF76P36508 570 aa11.32□□□□□ -0.6
TPM4-216ENST00000592822 BEX3Q00994 111 aa11.32□□□□□ -0.6
TPM4-216ENST00000592822 MTMR1Q13613 665 aa11.32□□□□□ -0.6
TPM4-216ENST00000592822 SAFBQ15424 915 aaKnown RBP eCLIP11.32□□□□□ -0.6
TPM4-216ENST00000592822 FSCN1Q16658 493 aaKnown RBP11.32□□□□□ -0.6
TPM4-216ENST00000592822 CCSAPQ6IQ19 270 aaPredicted RBP11.32□□□□□ -0.6
TPM4-216ENST00000592822 NIPA1Q7RTP0 329 aa11.32□□□□□ -0.6
TPM4-216ENST00000592822 RNF180Q86T96 592 aa11.32□□□□□ -0.6
TPM4-216ENST00000592822 OR6J1Q8NGC5 347 aa11.32□□□□□ -0.6
TPM4-216ENST00000592822 DIS3LQ8TF46 1054 aaKnown RBP11.32□□□□□ -0.6
TPM4-216ENST00000592822 AP5M1Q9H0R1 490 aa11.32□□□□□ -0.6
TPM4-216ENST00000592822 KCNH7Q9NS40 1196 aa11.32□□□□□ -0.6
TPM4-216ENST00000592822 CYP3A7-CYP3A51PA0A087WV96 503 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 A6NJR5 290 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 KIF28PB7ZC32 967 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 SORBS3O60504 671 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 FARP2O94887 1054 aaPredicted RBP11.31□□□□□ -0.6
TPM4-216ENST00000592822 TDP2O95551 362 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 GGPS1O95749 300 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 COL6A1P12109 1028 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 KCNA2P16389 499 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 CYP3A7P24462 503 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 CST5P28325 142 aaPredicted RBP11.31□□□□□ -0.6
TPM4-216ENST00000592822 PRR16Q569H4 304 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 GNASQ5JWF2 1037 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 CELF3Q5SZQ8 465 aaKnown RBP11.31□□□□□ -0.6
TPM4-216ENST00000592822 MYSM1Q5VVJ2 828 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 LARP1BQ659C4 914 aaKnown RBP11.31□□□□□ -0.6
TPM4-216ENST00000592822 PLA2G4DQ86XP0 818 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 DHX37Q8IY37 1157 aaKnown RBP11.31□□□□□ -0.6
TPM4-216ENST00000592822 EMID1Q96A84 441 aaPredicted RBP11.31□□□□□ -0.6
TPM4-216ENST00000592822 LENG9Q96B70 501 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 PAWRQ96IZ0 340 aaKnown RBP11.31□□□□□ -0.6
TPM4-216ENST00000592822 CDHR1Q96JP9 859 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 MBOAT7Q96N66 472 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 SENP7Q9BQF6 1050 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 FOXP1Q9H334 677 aaPredicted RBP11.31□□□□□ -0.6
TPM4-216ENST00000592822 SPC25Q9HBM1 224 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 AGO4Q9HCK5 861 aaKnown RBP11.31□□□□□ -0.6
TPM4-216ENST00000592822 TELO2Q9Y4R8 837 aa11.31□□□□□ -0.6
TPM4-216ENST00000592822 KBTBD13C9JR72 458 aa11.3□□□□□ -0.6
TPM4-216ENST00000592822 H3BQV1 296 aa11.3□□□□□ -0.6
TPM4-216ENST00000592822 MAFGO15525 162 aa11.3□□□□□ -0.6
TPM4-216ENST00000592822 U2AF2P26368 475 aaKnown RBP eCLIP11.3□□□□□ -0.6
TPM4-216ENST00000592822 ACLYP53396 1101 aa11.3□□□□□ -0.6
TPM4-216ENST00000592822 ITGB3BPQ13352 177 aaPredicted RBP11.3□□□□□ -0.6
TPM4-216ENST00000592822 LAMC2Q13753 1193 aa11.3□□□□□ -0.6
TPM4-216ENST00000592822 NEDD9Q14511 834 aa11.3□□□□□ -0.6
TPM4-216ENST00000592822 KCNA10Q16322 511 aa11.3□□□□□ -0.6
TPM4-216ENST00000592822 LETM2Q2VYF4 491 aa11.3□□□□□ -0.6
TPM4-216ENST00000592822 IFFO2Q5TF58 517 aa11.3□□□□□ -0.6
TPM4-216ENST00000592822 MOXD1Q6UVY6 613 aa11.3□□□□□ -0.6
TPM4-216ENST00000592822 NEK8Q86SG6 692 aa11.3□□□□□ -0.6
TPM4-216ENST00000592822 AFG1LQ8WV93 481 aa11.3□□□□□ -0.6
TPM4-216ENST00000592822 UIMC1Q96RL1 719 aa11.3□□□□□ -0.6
TPM4-216ENST00000592822 TSEN34Q9BSV6 310 aaKnown RBP11.3□□□□□ -0.6
TPM4-216ENST00000592822 PKD2L1Q9P0L9 805 aa11.3□□□□□ -0.6
TPM4-216ENST00000592822 PHF24Q9UPV7 400 aa11.3□□□□□ -0.6
TPM4-216ENST00000592822 WNT7AO00755 349 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 ASGR1P07306 291 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 SYT1P21579 422 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 RGS19P49795 217 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 CPT1AP50416 773 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 SETQ01105 290 aaPredicted RBP11.29□□□□□ -0.6
TPM4-216ENST00000592822 HSDL1Q3SXM5 330 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 Q4G0T1 1027 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 PPP4R3AQ6IN85 833 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms