RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 TCHHQ07283 1943 aa19.63■□□□□ 0.73
AP3D1-211ENST00000591650 RBM47A0AV96 593 aaKnown RBP19.63■□□□□ 0.73
AP3D1-211ENST00000591650 MYCP01106 439 aaPredicted RBP19.63■□□□□ 0.73
AP3D1-211ENST00000591650 ARP10275 920 aa19.63■□□□□ 0.73
AP3D1-211ENST00000591650 TRAPPC10P48553 1259 aa19.63■□□□□ 0.73
AP3D1-211ENST00000591650 MTMR1Q13613 665 aa19.63■□□□□ 0.73
AP3D1-211ENST00000591650 NIPA1Q7RTP0 329 aa19.63■□□□□ 0.73
AP3D1-211ENST00000591650 NLRX1Q86UT6 975 aa19.63■□□□□ 0.73
AP3D1-211ENST00000591650 POTEDQ86YR6 584 aa19.63■□□□□ 0.73
AP3D1-211ENST00000591650 SCFD2Q8WU76 684 aa19.63■□□□□ 0.73
AP3D1-211ENST00000591650 UIMC1Q96RL1 719 aa19.63■□□□□ 0.73
AP3D1-211ENST00000591650 FTOQ9C0B1 505 aaKnown RBP eCLIP19.63■□□□□ 0.73
AP3D1-211ENST00000591650 ZSCAN16Q9H4T2 348 aaPredicted RBP19.63■□□□□ 0.73
AP3D1-211ENST00000591650 PKD2L1Q9P0L9 805 aa19.63■□□□□ 0.73
AP3D1-211ENST00000591650 DDX25Q9UHL0 483 aaKnown RBP19.63■□□□□ 0.73
AP3D1-211ENST00000591650 CIZ1Q9ULV3 898 aaPredicted RBP19.63■□□□□ 0.73
AP3D1-211ENST00000591650 PCDHB6Q9Y5E3 794 aa19.63■□□□□ 0.73
AP3D1-211ENST00000591650 MRVI1Q9Y6F6 885 aa19.63■□□□□ 0.73
AP3D1-211ENST00000591650 FIBPO43427 364 aa19.62■□□□□ 0.73
AP3D1-211ENST00000591650 GCFC2P16383 781 aaKnown RBP19.62■□□□□ 0.73
AP3D1-211ENST00000591650 UBA1P22314 1058 aaKnown RBP19.62■□□□□ 0.73
AP3D1-211ENST00000591650 ICAM3P32942 547 aa19.62■□□□□ 0.73
AP3D1-211ENST00000591650 MCM7P33993 719 aa19.62■□□□□ 0.73
AP3D1-211ENST00000591650 SETQ01105 290 aaPredicted RBP19.62■□□□□ 0.73
AP3D1-211ENST00000591650 Q4G0T1 1027 aa19.62■□□□□ 0.73
AP3D1-211ENST00000591650 RILPL1Q5EBL4 403 aa19.62■□□□□ 0.73
AP3D1-211ENST00000591650 GJC2Q5T442 439 aaPredicted RBP19.62■□□□□ 0.73
AP3D1-211ENST00000591650 PPP4R3AQ6IN85 833 aa19.62■□□□□ 0.73
AP3D1-211ENST00000591650 TNS4Q8IZW8 715 aa19.62■□□□□ 0.73
AP3D1-211ENST00000591650 KCNH7Q9NS40 1196 aa19.62■□□□□ 0.73
AP3D1-211ENST00000591650 SPATA31C2B4DYI2 1134 aa19.61■□□□□ 0.73
AP3D1-211ENST00000591650 NUCB2P80303 420 aa19.61■□□□□ 0.73
AP3D1-211ENST00000591650 ZNF174Q15697 407 aa19.61■□□□□ 0.73
AP3D1-211ENST00000591650 FOXD4L6Q3SYB3 417 aaPredicted RBP19.61■□□□□ 0.73
AP3D1-211ENST00000591650 CCDC62Q6P9F0 684 aa19.61■□□□□ 0.73
AP3D1-211ENST00000591650 FOXD4L3Q6VB84 417 aaPredicted RBP19.61■□□□□ 0.73
AP3D1-211ENST00000591650 COPS5Q92905 334 aa19.61■□□□□ 0.73
AP3D1-211ENST00000591650 GJA10Q969M2 543 aa19.61■□□□□ 0.73
AP3D1-211ENST00000591650 NAP1L4Q99733 375 aaKnown RBP19.61■□□□□ 0.73
AP3D1-211ENST00000591650 UNC93B1Q9H1C4 597 aa19.61■□□□□ 0.73
AP3D1-211ENST00000591650 AGO4Q9HCK5 861 aaKnown RBP19.61■□□□□ 0.73
AP3D1-211ENST00000591650 BRCA2P51587 3418 aa19.61■□□□□ 0.73
AP3D1-211ENST00000591650 WDR81Q562E7 1941 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 MSH4O15457 936 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 SEPT4O43236 478 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 NEMFO60524 1076 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 ATP9AO75110 1047 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 TXNP10599 105 aaKnown RBP19.6■□□□□ 0.73
AP3D1-211ENST00000591650 AKR1A1P14550 325 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 KCNA2P16389 499 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 SMPD1P17405 629 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 CNGA1P29973 690 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 SP2Q02086 613 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 ITGB3BPQ13352 177 aaPredicted RBP19.6■□□□□ 0.73
AP3D1-211ENST00000591650 TTLL4Q14679 1199 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 LY6KQ17RY6 165 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 ANO1Q5XXA6 986 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 ETNPPLQ8TBG4 499 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 ABHD8Q96I13 439 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 CHAMP1Q96JM3 812 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 TMEM60Q9H2L4 133 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 BCAS3Q9H6U6 928 aa19.6■□□□□ 0.73
AP3D1-211ENST00000591650 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.6■□□□□ 0.73
AP3D1-211ENST00000591650 DDX41Q9UJV9 622 aaKnown RBP19.6■□□□□ 0.73
AP3D1-211ENST00000591650 SORBS3O60504 671 aa19.59■□□□□ 0.73
AP3D1-211ENST00000591650 CCL5P13501 91 aa19.59■□□□□ 0.73
AP3D1-211ENST00000591650 CDHR1Q96JP9 859 aa19.59■□□□□ 0.73
AP3D1-211ENST00000591650 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.59■□□□□ 0.73
AP3D1-211ENST00000591650 HMX1Q9NP08 348 aaPredicted RBP19.59■□□□□ 0.73
AP3D1-211ENST00000591650 KCNMB3Q9NPA1 279 aa19.59■□□□□ 0.73
AP3D1-211ENST00000591650 TNFAIP2Q03169 654 aa19.59■□□□□ 0.73
AP3D1-211ENST00000591650 ORC2Q13416 577 aaPredicted RBP19.59■□□□□ 0.73
AP3D1-211ENST00000591650 DUSP28Q4G0W2 176 aa19.59■□□□□ 0.73
AP3D1-211ENST00000591650 USP28Q96RU2 1077 aa19.59■□□□□ 0.73
AP3D1-211ENST00000591650 ZNF577Q9BSK1 485 aa19.59■□□□□ 0.73
AP3D1-211ENST00000591650 CHMP5Q9NZZ3 219 aa19.59■□□□□ 0.73
AP3D1-211ENST00000591650 FAM184BQ9ULE4 1060 aa19.59■□□□□ 0.73
AP3D1-211ENST00000591650 GNEQ9Y223 722 aaKnown RBP19.59■□□□□ 0.73
AP3D1-211ENST00000591650 IPO5O00410 1097 aaKnown RBP19.58■□□□□ 0.72
AP3D1-211ENST00000591650 GGPS1O95749 300 aa19.58■□□□□ 0.72
AP3D1-211ENST00000591650 IQSEC1Q6DN90 963 aa19.58■□□□□ 0.72
AP3D1-211ENST00000591650 KCNV1Q6PIU1 500 aa19.58■□□□□ 0.72
AP3D1-211ENST00000591650 HAS1Q92839 578 aa19.58■□□□□ 0.72
AP3D1-211ENST00000591650 SLC5A5Q92911 643 aa19.58■□□□□ 0.72
AP3D1-211ENST00000591650 PAK6Q9NQU5 681 aaPredicted RBP19.58■□□□□ 0.72
AP3D1-211ENST00000591650 DDX20Q9UHI6 824 aaKnown RBP19.58■□□□□ 0.72
AP3D1-211ENST00000591650 TELO2Q9Y4R8 837 aa19.58■□□□□ 0.72
AP3D1-211ENST00000591650 CLIC4Q9Y696 253 aa19.58■□□□□ 0.72
AP3D1-211ENST00000591650 POTEFA5A3E0 1075 aa19.57■□□□□ 0.72
AP3D1-211ENST00000591650 TGFB3P10600 412 aa19.57■□□□□ 0.72
AP3D1-211ENST00000591650 ARHGAP1Q07960 439 aa19.57■□□□□ 0.72
AP3D1-211ENST00000591650 SF3A1Q15459 793 aaKnown RBP19.57■□□□□ 0.72
AP3D1-211ENST00000591650 CALCRLQ16602 461 aa19.57■□□□□ 0.72
AP3D1-211ENST00000591650 TLK2Q86UE8 772 aa19.57■□□□□ 0.72
AP3D1-211ENST00000591650 C4orf32Q8N8J7 132 aa19.57■□□□□ 0.72
AP3D1-211ENST00000591650 RNF208Q9H0X6 261 aa19.57■□□□□ 0.72
AP3D1-211ENST00000591650 SYNRGQ9UMZ2 1314 aa19.56■□□□□ 0.72
AP3D1-211ENST00000591650 DDX39AO00148 427 aaKnown RBP19.56■□□□□ 0.72
AP3D1-211ENST00000591650 MAFGO15525 162 aa19.56■□□□□ 0.72
AP3D1-211ENST00000591650 DHX15O43143 795 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms