RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 PCDHA11Q9Y5I1 949 aa20.73■□□□□ 0.91
VAT1-208ENST00000590924 MRVI1Q9Y6F6 885 aa20.73■□□□□ 0.91
VAT1-208ENST00000590924 CCDC69A6NI79 296 aa20.72■□□□□ 0.91
VAT1-208ENST00000590924 ZBBXA8MT70 800 aa20.72■□□□□ 0.91
VAT1-208ENST00000590924 TROAPQ12815 778 aa20.72■□□□□ 0.91
VAT1-208ENST00000590924 DGKDQ16760 1214 aa20.72■□□□□ 0.91
VAT1-208ENST00000590924 HOMER1Q86YM7 354 aa20.72■□□□□ 0.91
VAT1-208ENST00000590924 RETREG2Q8NC44 543 aa20.72■□□□□ 0.91
VAT1-208ENST00000590924 KAT2BQ92831 832 aa20.72■□□□□ 0.91
VAT1-208ENST00000590924 NOD1Q9Y239 953 aa20.72■□□□□ 0.91
VAT1-208ENST00000590924 CALM1P0DP23 149 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 CALM2P0DP24 149 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 CALM3P0DP25 149 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 ACTN1P12814 892 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 CPA1P15085 419 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 ATP2A2P16615 1042 aaKnown RBP20.71■□□□□ 0.91
VAT1-208ENST00000590924 RABGGTBP53611 331 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 FGD1P98174 961 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 LAMC2Q13753 1193 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 PTGISQ16647 500 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 NFXL1Q6ZNB6 911 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 Q6ZUG5 572 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 CCDC155Q8N6L0 562 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 PPTC7Q8NI37 304 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 CAGE1Q8TC20 777 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 TBC1D32Q96NH3 1257 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 CTAGE1Q96RT6 745 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 SENP2Q9HC62 589 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 MICAL3Q7RTP6 2002 aa20.71■□□□□ 0.91
VAT1-208ENST00000590924 CYTH3O43739 400 aa20.7■□□□□ 0.9
VAT1-208ENST00000590924 RGS20O76081 388 aa20.7■□□□□ 0.9
VAT1-208ENST00000590924 DDAH1O94760 285 aa20.7■□□□□ 0.9
VAT1-208ENST00000590924 RCAN1P53805 252 aa20.7■□□□□ 0.9
VAT1-208ENST00000590924 EVCP57679 992 aa20.7■□□□□ 0.9
VAT1-208ENST00000590924 CHMP4BP1P59074 171 aa20.7■□□□□ 0.9
VAT1-208ENST00000590924 PGM5Q15124 567 aa20.7■□□□□ 0.9
VAT1-208ENST00000590924 GDF6Q6KF10 455 aaPredicted RBP20.7■□□□□ 0.9
VAT1-208ENST00000590924 KCNV1Q6PIU1 500 aa20.7■□□□□ 0.9
VAT1-208ENST00000590924 SYNE3Q6ZMZ3 975 aa20.7■□□□□ 0.9
VAT1-208ENST00000590924 PIGSQ96S52 555 aa20.7■□□□□ 0.9
VAT1-208ENST00000590924 KATNAL1Q9BW62 490 aa20.7■□□□□ 0.9
VAT1-208ENST00000590924 LRRC2Q9BYS8 371 aa20.7■□□□□ 0.9
VAT1-208ENST00000590924 GTF2IRD1Q9UHL9 959 aa20.7■□□□□ 0.9
VAT1-208ENST00000590924 SLC12A7Q9Y666 1083 aa20.7■□□□□ 0.9
VAT1-208ENST00000590924 PRRC2BQ5JSZ5 2229 aaKnown RBP20.69■□□□□ 0.9
VAT1-208ENST00000590924 PNMA6FA0A0J9YX94 578 aa20.69■□□□□ 0.9
VAT1-208ENST00000590924 F2P00734 622 aa20.69■□□□□ 0.9
VAT1-208ENST00000590924 MYCLP12524 364 aaPredicted RBP20.69■□□□□ 0.9
VAT1-208ENST00000590924 HOXD8P13378 290 aaPredicted RBP20.69■□□□□ 0.9
VAT1-208ENST00000590924 HOXA13P31271 388 aaPredicted RBP20.69■□□□□ 0.9
VAT1-208ENST00000590924 RBL2Q08999 1139 aa20.69■□□□□ 0.9
VAT1-208ENST00000590924 ADGRE1Q14246 886 aa20.69■□□□□ 0.9
VAT1-208ENST00000590924 PPP2R2DQ66LE6 453 aa20.69■□□□□ 0.9
VAT1-208ENST00000590924 VSIG10LQ86VR7 867 aa20.69■□□□□ 0.9
VAT1-208ENST00000590924 DHX37Q8IY37 1157 aaKnown RBP20.69■□□□□ 0.9
VAT1-208ENST00000590924 ZNF654Q8IZM8 581 aa20.69■□□□□ 0.9
VAT1-208ENST00000590924 AFAP1L1Q8TED9 768 aa20.69■□□□□ 0.9
VAT1-208ENST00000590924 TCEANC2Q96MN5 208 aa20.69■□□□□ 0.9
VAT1-208ENST00000590924 SLC9A7Q96T83 725 aa20.69■□□□□ 0.9
VAT1-208ENST00000590924 UPF3BQ9BZI7 483 aaKnown RBP20.69■□□□□ 0.9
VAT1-208ENST00000590924 PDRG1Q9NUG6 133 aa20.69■□□□□ 0.9
VAT1-208ENST00000590924 TTC28Q96AY4 2481 aa20.69■□□□□ 0.9
VAT1-208ENST00000590924 GCOM1H8Y6P7 765 aaPredicted RBP20.68■□□□□ 0.9
VAT1-208ENST00000590924 HAS3O00219 553 aa20.68■□□□□ 0.9
VAT1-208ENST00000590924 POLR2MP0CAP2 368 aa20.68■□□□□ 0.9
VAT1-208ENST00000590924 ANKRD1Q15327 319 aa20.68■□□□□ 0.9
VAT1-208ENST00000590924 IL31RAQ8NI17 732 aa20.68■□□□□ 0.9
VAT1-208ENST00000590924 KIF2CQ99661 725 aa20.68■□□□□ 0.9
VAT1-208ENST00000590924 BAIAP3O94812 1187 aa20.67■□□□□ 0.9
VAT1-208ENST00000590924 TGFB3P10600 412 aa20.67■□□□□ 0.9
VAT1-208ENST00000590924 MYOGP15173 224 aa20.67■□□□□ 0.9
VAT1-208ENST00000590924 CCND2P30279 289 aa20.67■□□□□ 0.9
VAT1-208ENST00000590924 KIF5BP33176 963 aa20.67■□□□□ 0.9
VAT1-208ENST00000590924 PSEN2P49810 448 aa20.67■□□□□ 0.9
VAT1-208ENST00000590924 MYSM1Q5VVJ2 828 aa20.67■□□□□ 0.9
VAT1-208ENST00000590924 APOA5Q6Q788 366 aa20.67■□□□□ 0.9
VAT1-208ENST00000590924 PHOSPHO2Q8TCD6 241 aa20.67■□□□□ 0.9
VAT1-208ENST00000590924 DHX38Q92620 1227 aaKnown RBP20.67■□□□□ 0.9
VAT1-208ENST00000590924 SYMPKQ92797 1274 aaKnown RBP20.67■□□□□ 0.9
VAT1-208ENST00000590924 BRF1Q92994 677 aa20.67■□□□□ 0.9
VAT1-208ENST00000590924 HDAC6Q9UBN7 1215 aa20.67■□□□□ 0.9
VAT1-208ENST00000590924 FRMPD4Q14CM0 1322 aa20.67■□□□□ 0.9
VAT1-208ENST00000590924 COL4A4P53420 1690 aaPredicted RBP20.67■□□□□ 0.9
VAT1-208ENST00000590924 NCOR1O75376 2440 aa20.66■□□□□ 0.9
VAT1-208ENST00000590924 PPFIA4O75335 1185 aa20.66■□□□□ 0.9
VAT1-208ENST00000590924 PARNO95453 639 aaKnown RBP20.66■□□□□ 0.9
VAT1-208ENST00000590924 ZNF286BP0CG31 522 aa20.66■□□□□ 0.9
VAT1-208ENST00000590924 SELPP16109 830 aa20.66■□□□□ 0.9
VAT1-208ENST00000590924 SMARCA1P28370 1054 aa20.66■□□□□ 0.9
VAT1-208ENST00000590924 GNAQP50148 359 aa20.66■□□□□ 0.9
VAT1-208ENST00000590924 NEK4P51957 841 aa20.66■□□□□ 0.9
VAT1-208ENST00000590924 TOB2Q14106 344 aaPredicted RBP20.66■□□□□ 0.9
VAT1-208ENST00000590924 MFSD10Q14728 455 aa20.66■□□□□ 0.9
VAT1-208ENST00000590924 KIAA0753Q2KHM9 967 aa20.66■□□□□ 0.9
VAT1-208ENST00000590924 CELF3Q5SZQ8 465 aaKnown RBP20.66■□□□□ 0.9
VAT1-208ENST00000590924 C7orf31Q8N865 590 aa20.66■□□□□ 0.9
VAT1-208ENST00000590924 CTCFLQ8NI51 663 aaPredicted RBP20.66■□□□□ 0.9
VAT1-208ENST00000590924 FTOQ9C0B1 505 aaKnown RBP eCLIP20.66■□□□□ 0.9
VAT1-208ENST00000590924 BRPF3Q9ULD4 1205 aa20.66■□□□□ 0.9
VAT1-208ENST00000590924 SIP14410 1827 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms