RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 CUL5Q93034 780 aa8.78□□□□□ -1
NPC1-208ENST00000590301 PBX4Q9BYU1 374 aa8.78□□□□□ -1
NPC1-208ENST00000590301 ANO2Q9NQ90 1003 aa8.78□□□□□ -1
NPC1-208ENST00000590301 TAF6LQ9Y6J9 622 aa8.78□□□□□ -1
NPC1-208ENST00000590301 SLC4A7Q9Y6M7 1214 aa8.78□□□□□ -1
NPC1-208ENST00000590301 FRMPD4Q14CM0 1322 aa8.78□□□□□ -1
NPC1-208ENST00000590301 LAMA4Q16363 1823 aa8.77□□□□□ -1
NPC1-208ENST00000590301 PIK3CDO00329 1044 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 SH2B2O14492 632 aaPredicted RBP8.77□□□□□ -1.01
NPC1-208ENST00000590301 SLC27A2O14975 620 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 BAIAP3O94812 1187 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 IQCF3P0C7M6 154 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 MYCLP12524 364 aaPredicted RBP8.77□□□□□ -1.01
NPC1-208ENST00000590301 ATP2A2P16615 1042 aaKnown RBP8.77□□□□□ -1.01
NPC1-208ENST00000590301 HOXA13P31271 388 aaPredicted RBP8.77□□□□□ -1.01
NPC1-208ENST00000590301 ICAM3P32942 547 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 NECTIN1Q15223 517 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 PTGISQ16647 500 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 CELF3Q5SZQ8 465 aaKnown RBP8.77□□□□□ -1.01
NPC1-208ENST00000590301 MYSM1Q5VVJ2 828 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 CREB3L3Q68CJ9 461 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 CHST3Q7LGC8 479 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 OTOP2Q7RTS6 562 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 PHOSPHO2Q8TCD6 241 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 MYLIPQ8WY64 445 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 KAT2BQ92831 832 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 FAM212AQ96EL1 285 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 SPATA33Q96N06 139 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 INPP4AQ96PE3 977 aaPredicted RBP8.77□□□□□ -1.01
NPC1-208ENST00000590301 SLC28A3Q9HAS3 691 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 SENP2Q9HC62 589 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 GTF2IRD1Q9UHL9 959 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 PCDHA11Q9Y5I1 949 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 SLC12A7Q9Y666 1083 aa8.77□□□□□ -1.01
NPC1-208ENST00000590301 C19orf67A6NJJ6 358 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 ZBBXA8MT70 800 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 SPATA31C2B4DYI2 1134 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 HAS3O00219 553 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 DLL1O00548 723 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 FIBPO43427 364 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 RGS20O76081 388 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 GGPS1O95749 300 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 SELPP16109 830 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 UBA1P22314 1058 aaKnown RBP8.76□□□□□ -1.01
NPC1-208ENST00000590301 PSEN2P49810 448 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 PTK7Q13308 1070 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 NEDD9Q14511 834 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 KRT32Q14532 448 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 MFSD10Q14728 455 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 GRIN2CQ14957 1233 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 PCNX4Q63HM2 1172 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 SYNE3Q6ZMZ3 975 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 SGMS1Q86VZ5 419 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 FCHSD1Q86WN1 690 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 GIMAP8Q8ND71 665 aaPredicted RBP8.76□□□□□ -1.01
NPC1-208ENST00000590301 SMARCC2Q8TAQ2 1214 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 SCLYQ96I15 445 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 CDHR1Q96JP9 859 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 SLC9A7Q96T83 725 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 GAS2L1Q99501 681 aaPredicted RBP8.76□□□□□ -1.01
NPC1-208ENST00000590301 SENP7Q9BQF6 1050 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 MLXIPQ9HAP2 919 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 CXXC1Q9P0U4 656 aaPredicted RBP8.76□□□□□ -1.01
NPC1-208ENST00000590301 COL6A3P12111 3177 aa8.76□□□□□ -1.01
NPC1-208ENST00000590301 CHD9Q3L8U1 2897 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 GRXCR1A8MXD5 290 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 NOP56O00567 594 aaKnown RBP8.75□□□□□ -1.01
NPC1-208ENST00000590301 EFCAB14O75071 495 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 CDC45O75419 566 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 HMGB1P09429 215 aaKnown RBP8.75□□□□□ -1.01
NPC1-208ENST00000590301 PBX2P40425 430 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 RCAN1P53805 252 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 CHMP4BP1P59074 171 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 KIAA0753Q2KHM9 967 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 HSDL1Q3SXM5 330 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 TSGA10IPQ3SY00 556 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 GDF6Q6KF10 455 aaPredicted RBP8.75□□□□□ -1.01
NPC1-208ENST00000590301 METTL7BQ6UX53 244 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 TMTC3Q6ZXV5 915 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 LRRC8DQ7L1W4 858 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 DEFB128Q7Z7B8 93 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 NLRX1Q86UT6 975 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 FANCBQ8NB91 859 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 IL31RAQ8NI17 732 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 VWCEQ96DN2 955 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 USP26Q9BXU7 913 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 FTOQ9C0B1 505 aaKnown RBP eCLIP8.75□□□□□ -1.01
NPC1-208ENST00000590301 RBM28Q9NW13 759 aaKnown RBP8.75□□□□□ -1.01
NPC1-208ENST00000590301 HDAC6Q9UBN7 1215 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 ZNFX1Q9P2E3 1918 aaKnown RBP8.75□□□□□ -1.01
NPC1-208ENST00000590301 EMSYQ7Z589 1322 aa8.75□□□□□ -1.01
NPC1-208ENST00000590301 KIF28PB7ZC32 967 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 H3BRB1 525 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 hCG_1984214I3L0E3 225 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 MEIS2O14770 477 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 MAFGO15525 162 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 CAND2O75155 1236 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 PLEKHA8P1O95397 391 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 CXCL10P02778 98 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 ZNF286BP0CG31 522 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms