RNA–Protein interactions for RNA: ENST00000589057.5

APOC4-APOC2-202, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene APOC4-APOC2, Length 680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-202ENST00000589057 LRRC8DQ7L1W4 858 aa12.86□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 C7orf31Q8N865 590 aa12.86□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 GPKOWQ92917 476 aaPredicted RBP eCLIP12.86□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 WNT8BQ93098 351 aa12.86□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 ASB2Q96Q27 587 aa12.86□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 KATNAL1Q9BW62 490 aa12.86□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 CERS4Q9HA82 394 aa12.86□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 DOCK5Q9H7D0 1870 aa12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 PNMA6FA0A0J9YX94 578 aa12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 GCOM1H8Y6P7 765 aaPredicted RBP12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 SORBS3O60504 671 aa12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 NBNO60934 754 aa12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 PPFIA4O75335 1185 aa12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 GGPS1O95749 300 aa12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 CXCL10P02778 98 aa12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 POLR2MP0CAP2 368 aa12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 POU3F3P20264 500 aaPredicted RBP12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 UBA1P22314 1058 aaKnown RBP12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 WDR5P61964 334 aaKnown RBP12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 ZNF200P98182 395 aaPredicted RBP12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 WTAPQ15007 396 aa12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 TRIM71Q2Q1W2 868 aaKnown RBP12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 KCNV1Q6PIU1 500 aa12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 TRAF7Q6Q0C0 670 aa12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 SPRED2Q7Z698 418 aa12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 RALYLQ86SE5 291 aaKnown RBP12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 NCOA7Q8NI08 942 aa12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 IGDCC4Q8TDY8 1250 aa12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 C16orf70Q9BSU1 422 aa12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 COL4A4P53420 1690 aaPredicted RBP12.85□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 PRRC2BQ5JSZ5 2229 aaKnown RBP12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 ERICH2A1L162 156 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 TNFRSF10AO00220 468 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 TGFB3P10600 412 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 CCND2P30279 289 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 DEFB103AP81534 67 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 MRPS5P82675 430 aaKnown RBP12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 TRAF1Q13077 416 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 PTK7Q13308 1070 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 MBTPS1Q14703 1052 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 KRT40Q6A162 431 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 CNKSR3Q6P9H4 555 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 TMCO2Q7Z6W1 182 aaPredicted RBP12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 FCHSD1Q86WN1 690 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 MB21D2Q8IYB1 491 aaPredicted RBP12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 MICALL1Q8N3F8 863 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 MAP4K1Q92918 833 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 SPATA33Q96N06 139 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 BCAS3Q9H6U6 928 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 MTCH2Q9Y6C9 303 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 FRMPD4Q14CM0 1322 aa12.84□□□□□ -0.35
APOC4-APOC2-202ENST00000589057 LCHNA4D1U4 455 aa12.83□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 KIF28PB7ZC32 967 aa12.83□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 PARNO95453 639 aaKnown RBP12.83□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 KCNJ6P48051 423 aa12.83□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 IRX6P78412 446 aaPredicted RBP12.83□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 MRPS9P82933 396 aaKnown RBP12.83□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 ZNF618Q5T7W0 954 aa12.83□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 ADAMTS19Q8TE59 1207 aa12.83□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 ARNTL2Q8WYA1 636 aa12.83□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 RBM8AQ9Y5S9 174 aaKnown RBP12.83□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 MUC3AQ02505 3323 aa12.83□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 TCF20Q9UGU0 1960 aaKnown RBP12.82□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 TLL1O43897 1013 aa12.82□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 SEMA3FQ13275 785 aa12.82□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 COL9A3Q14050 684 aaPredicted RBP12.82□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 CATIPQ7Z7H3 387 aa12.82□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 PIBF1Q8WXW3 757 aa12.82□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 INPP4AQ96PE3 977 aaPredicted RBP12.82□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 MYL10Q9BUA6 226 aa12.82□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 MLXIPQ9HAP2 919 aa12.82□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 LY9Q9HBG7 655 aa12.82□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 MICAL3Q7RTP6 2002 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 ABHD14A-ACY1A0A1B0GW23 586 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 LPXNO60711 386 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 LGALS2P05162 132 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 HOXC8P31273 242 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 ICAM3P32942 547 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 TFF2Q03403 129 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 GRB10Q13322 594 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 SERINC5Q86VE9 423 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 ZNF654Q8IZM8 581 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 MAP3K14Q99558 947 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 SPZ1Q9BXG8 430 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 RTEL1Q9NZ71 1219 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 TELO2Q9Y4R8 837 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 REV3LO60673 3130 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 SIP14410 1827 aa12.81□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 SPATA31C2B4DYI2 1134 aa12.8□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 H3BRB1 525 aa12.8□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 GTPBP6O43824 516 aaPredicted RBP12.8□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 STAM2O75886 525 aa12.8□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 DDAH1O94760 285 aa12.8□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 GJB5O95377 273 aa12.8□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 BMP1P13497 986 aa12.8□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 IKBKEQ14164 716 aa12.8□□□□□ -0.36
APOC4-APOC2-202ENST00000589057 GNPTABQ3T906 1256 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms