RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 TRAPPC10P48553 1259 aa17.57■□□□□ 0.4
RPRD1A-208ENST00000589050 TNFAIP2Q03169 654 aa17.57■□□□□ 0.4
RPRD1A-208ENST00000589050 MTFR1Q15390 333 aa17.57■□□□□ 0.4
RPRD1A-208ENST00000589050 KCNV1Q6PIU1 500 aa17.57■□□□□ 0.4
RPRD1A-208ENST00000589050 MOXD1Q6UVY6 613 aa17.57■□□□□ 0.4
RPRD1A-208ENST00000589050 CDHR1Q96JP9 859 aa17.57■□□□□ 0.4
RPRD1A-208ENST00000589050 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.57■□□□□ 0.4
RPRD1A-208ENST00000589050 ZSCAN16Q9H4T2 348 aaPredicted RBP17.57■□□□□ 0.4
RPRD1A-208ENST00000589050 WNT7AO00755 349 aa17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 ARIH2O95376 493 aa17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 ARP10275 920 aa17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 SMPD1P17405 629 aa17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 SETQ01105 290 aaPredicted RBP17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 SEMA3FQ13275 785 aa17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 LY6KQ17RY6 165 aa17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 Q4G0T1 1027 aa17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 TTC38Q5R3I4 469 aa17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 TMEM63BQ5T3F8 832 aa17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 PPP4R3AQ6IN85 833 aa17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 LENG9Q96B70 501 aa17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 MBOAT7Q96N66 472 aa17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 RNF208Q9H0X6 261 aa17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 KCNH7Q9NS40 1196 aa17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 PKD2L1Q9P0L9 805 aa17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 DDX25Q9UHL0 483 aaKnown RBP17.56■□□□□ 0.4
RPRD1A-208ENST00000589050 MAFGO15525 162 aa17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 ADCY6O43306 1168 aa17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 SLC37A4O43826 429 aa17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 BRD1O95696 1058 aa17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 F13A1P00488 732 aa17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 TGFB3P10600 412 aa17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 MCM7P33993 719 aa17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 DDIT3P35638 169 aa17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 TOB1P50616 345 aaPredicted RBP17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 NBR1Q14596 966 aa17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 DUSP28Q4G0W2 176 aa17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 RILPL1Q5EBL4 403 aa17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 MYSM1Q5VVJ2 828 aa17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 ANO1Q5XXA6 986 aa17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 CCDC62Q6P9F0 684 aa17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 LENG1Q96BZ8 264 aaPredicted RBP17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 AGO4Q9HCK5 861 aaKnown RBP17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 DDX20Q9UHI6 824 aaKnown RBP17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 DDX41Q9UJV9 622 aaKnown RBP17.55■□□□□ 0.4
RPRD1A-208ENST00000589050 RARBP10826 455 aa17.54■□□□□ 0.4
RPRD1A-208ENST00000589050 UBA1P22314 1058 aaKnown RBP17.54■□□□□ 0.4
RPRD1A-208ENST00000589050 SP2Q02086 613 aa17.54■□□□□ 0.4
RPRD1A-208ENST00000589050 ZNF174Q15697 407 aa17.54■□□□□ 0.4
RPRD1A-208ENST00000589050 GJC2Q5T442 439 aaPredicted RBP17.54■□□□□ 0.4
RPRD1A-208ENST00000589050 COPS5Q92905 334 aa17.54■□□□□ 0.4
RPRD1A-208ENST00000589050 UIMC1Q96RL1 719 aa17.54■□□□□ 0.4
RPRD1A-208ENST00000589050 ZNF577Q9BSK1 485 aa17.54■□□□□ 0.4
RPRD1A-208ENST00000589050 ZDHHC9Q9Y397 364 aa17.54■□□□□ 0.4
RPRD1A-208ENST00000589050 NKRFO15226 690 aaKnown RBP eCLIP17.53■□□□□ 0.4
RPRD1A-208ENST00000589050 MSH4O15457 936 aa17.53■□□□□ 0.4
RPRD1A-208ENST00000589050 SORBS3O60504 671 aa17.53■□□□□ 0.4
RPRD1A-208ENST00000589050 NEMFO60524 1076 aa17.53■□□□□ 0.4
RPRD1A-208ENST00000589050 MSCO60682 206 aa17.53■□□□□ 0.4
RPRD1A-208ENST00000589050 ATP9AO75110 1047 aa17.53■□□□□ 0.4
RPRD1A-208ENST00000589050 KCNA2P16389 499 aa17.53■□□□□ 0.4
RPRD1A-208ENST00000589050 PTGS1P23219 599 aa17.53■□□□□ 0.4
RPRD1A-208ENST00000589050 NUCB2P80303 420 aa17.53■□□□□ 0.4
RPRD1A-208ENST00000589050 FAM173BQ6P4H8 233 aa17.53■□□□□ 0.4
RPRD1A-208ENST00000589050 PAK6Q9NQU5 681 aaPredicted RBP17.53■□□□□ 0.4
RPRD1A-208ENST00000589050 GNEQ9Y223 722 aaKnown RBP17.53■□□□□ 0.4
RPRD1A-208ENST00000589050 PCDHB6Q9Y5E3 794 aa17.53■□□□□ 0.4
RPRD1A-208ENST00000589050 MCM3APO60318 1980 aa17.52■□□□□ 0.4
RPRD1A-208ENST00000589050 IPO5O00410 1097 aaKnown RBP17.52■□□□□ 0.4
RPRD1A-208ENST00000589050 DUSP11O75319 330 aaKnown RBP17.52■□□□□ 0.4
RPRD1A-208ENST00000589050 GGPS1O95749 300 aa17.52■□□□□ 0.4
RPRD1A-208ENST00000589050 GH1P01241 217 aa17.52■□□□□ 0.4
RPRD1A-208ENST00000589050 ORC2Q13416 577 aaPredicted RBP17.52■□□□□ 0.4
RPRD1A-208ENST00000589050 NEDD9Q14511 834 aa17.52■□□□□ 0.4
RPRD1A-208ENST00000589050 TLK2Q86UE8 772 aa17.52■□□□□ 0.4
RPRD1A-208ENST00000589050 DHX37Q8IY37 1157 aaKnown RBP17.52■□□□□ 0.4
RPRD1A-208ENST00000589050 GIMAP8Q8ND71 665 aaPredicted RBP17.52■□□□□ 0.4
RPRD1A-208ENST00000589050 OR6J1Q8NGC5 347 aa17.52■□□□□ 0.4
RPRD1A-208ENST00000589050 DEFB118Q96PH6 123 aa17.52■□□□□ 0.4
RPRD1A-208ENST00000589050 SENP7Q9BQF6 1050 aa17.52■□□□□ 0.4
RPRD1A-208ENST00000589050 HTTP42858 3142 aa17.52■□□□□ 0.4
RPRD1A-208ENST00000589050 MYH7BA7E2Y1 1941 aa17.52■□□□□ 0.4
RPRD1A-208ENST00000589050 DYNC1LI2O43237 492 aaPredicted RBP17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 MARCH6O60337 910 aa17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 ARHGAP1Q07960 439 aa17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 ITGB3BPQ13352 177 aaPredicted RBP17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 CALCRLQ16602 461 aa17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 FOXD4L6Q3SYB3 417 aaPredicted RBP17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 CELF3Q5SZQ8 465 aaKnown RBP17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 LHX8Q68G74 356 aa17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 FOXD4L3Q6VB84 417 aaPredicted RBP17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 CYFIP1Q7L576 1253 aa17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 ETNPPLQ8TBG4 499 aa17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 GJA10Q969M2 543 aa17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 SDF4Q9BRK5 362 aa17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 AP5M1Q9H0R1 490 aa17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 BCAS3Q9H6U6 928 aa17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 MLXIPQ9HAP2 919 aa17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 KCNMB3Q9NPA1 279 aa17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 XPNPEP3Q9NQH7 507 aa17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms