RNA–Protein interactions for RNA: ENST00000585534.1

CNTNAP1-202, Transcript of contactin associated protein 1, humanhuman

TSL 3

Gene CNTNAP1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-202ENST00000585534 CREB3L3Q68CJ9 461 aa13.51□□□□□ -0.25
CNTNAP1-202ENST00000585534 SMARCC2Q8TAQ2 1214 aa13.51□□□□□ -0.25
CNTNAP1-202ENST00000585534 CAGE1Q8TC20 777 aa13.51□□□□□ -0.25
CNTNAP1-202ENST00000585534 GPKOWQ92917 476 aaPredicted RBP eCLIP13.51□□□□□ -0.25
CNTNAP1-202ENST00000585534 TMEM87BQ96K49 555 aa13.51□□□□□ -0.25
CNTNAP1-202ENST00000585534 LZTS2Q9BRK4 669 aa13.51□□□□□ -0.25
CNTNAP1-202ENST00000585534 MTA3Q9BTC8 594 aa13.51□□□□□ -0.25
CNTNAP1-202ENST00000585534 COL25A1Q9BXS0 654 aaPredicted RBP13.51□□□□□ -0.25
CNTNAP1-202ENST00000585534 SEC63Q9UGP8 760 aaKnown RBP13.51□□□□□ -0.25
CNTNAP1-202ENST00000585534 GTF2IRD1Q9UHL9 959 aa13.51□□□□□ -0.25
CNTNAP1-202ENST00000585534 PCDHA11Q9Y5I1 949 aa13.51□□□□□ -0.25
CNTNAP1-202ENST00000585534 TET1Q8NFU7 2136 aa13.51□□□□□ -0.25
CNTNAP1-202ENST00000585534 EYSQ5T1H1 3165 aa13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 SH2B2O14492 632 aaPredicted RBP13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 F2P00734 622 aa13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 RXRAP19793 462 aa13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 UBA1P22314 1058 aaKnown RBP13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 IGFBP4P22692 258 aa13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 SMARCA1P28370 1054 aa13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 NECTIN1Q15223 517 aa13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 GNPTABQ3T906 1256 aa13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 PPP2R2DQ66LE6 453 aa13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 CMTR1Q8N1G2 835 aaKnown RBP13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 AFAP1L1Q8TED9 768 aa13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 CUL5Q93034 780 aa13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 CTAGE1Q96RT6 745 aa13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 SPZ1Q9BXG8 430 aa13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 RTEL1Q9NZ71 1219 aa13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 PRUNE2Q8WUY3 3088 aa13.5□□□□□ -0.25
CNTNAP1-202ENST00000585534 GBF1Q92538 1859 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 HAS3O00219 553 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 PLEKHA8P1O95397 391 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 CALM1P0DP23 149 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 CALM2P0DP24 149 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 CALM3P0DP25 149 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 SELPP16109 830 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 LIFRP42702 1097 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 MRPS9P82933 396 aaKnown RBP13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 USP17L6PQ6QN14 398 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 LRRC8DQ7L1W4 858 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 SKAP1Q86WV1 359 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 RAB11FIP4Q86YS3 637 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 SRBD1Q8N5C6 995 aaKnown RBP13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 USP38Q8NB14 1042 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 DHX38Q92620 1227 aaKnown RBP13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 LRRC2Q9BYS8 371 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 BCAS3Q9H6U6 928 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 SLC12A7Q9Y666 1083 aa13.49□□□□□ -0.25
CNTNAP1-202ENST00000585534 NOP56O00567 594 aaKnown RBP13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 STAM2O75886 525 aa13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 CKBP12277 381 aa13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 HOXD8P13378 290 aaPredicted RBP13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 ZNF200P98182 395 aaPredicted RBP13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 PTK7Q13308 1070 aa13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 COL9A3Q14050 684 aaPredicted RBP13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 ADGRE1Q14246 886 aa13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 NEDD9Q14511 834 aa13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 CCDC85BQ15834 202 aaPredicted RBP13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 BMP2KLQ5H9B9 411 aa13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 RNF20Q5VTR2 975 aa13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 CENPQQ7L2Z9 268 aaPredicted RBP13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 CCDC82Q8N4S0 544 aa13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 PHOSPHO2Q8TCD6 241 aa13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 SLC9A7Q96T83 725 aa13.48□□□□□ -0.25
CNTNAP1-202ENST00000585534 hCG_1642624A0A1W2PR95 340 aa13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 SPATA31C2B4DYI2 1134 aa13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 KIF28PB7ZC32 967 aa13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 H3BRB1 525 aa13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 MEIS2O14770 477 aa13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 BAIAP3O94812 1187 aa13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 PARNO95453 639 aaKnown RBP13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 CA3P07451 260 aa13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 ICAM3P32942 547 aa13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 KCNJ6P48051 423 aa13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 GPNMBQ14956 572 aa13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 SYNE3Q6ZMZ3 975 aa13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 CYFIP1Q7L576 1253 aa13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 FANCBQ8NB91 859 aa13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 INPP4AQ96PE3 977 aaPredicted RBP13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 C16orf70Q9BSU1 422 aa13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 TUT1Q9H6E5 874 aaKnown RBP13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 PSTPIP2Q9H939 334 aa13.47□□□□□ -0.25
CNTNAP1-202ENST00000585534 FRMPD4Q14CM0 1322 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 C17orf102A2RUQ5 167 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 PIK3CDO00329 1044 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 FIBPO43427 364 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 RBL2Q08999 1139 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 SEMA3FQ13275 785 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 HIC1Q14526 733 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 ZNF618Q5T7W0 954 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 PCNX4Q63HM2 1172 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 XRRA1Q6P2D8 792 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 CNKSR3Q6P9H4 555 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 METTL7BQ6UX53 244 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 NLRX1Q86UT6 975 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 MICU3Q86XE3 530 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 HERC6Q8IVU3 1022 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 USP26Q9BXU7 913 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 CERS4Q9HA82 394 aa13.46□□□□□ -0.25
CNTNAP1-202ENST00000585534 PRDM6Q9NQX0 595 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms