RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 EVCP57679 992 aa26.71■■□□□ 1.87
LSM7-203ENST00000585409 NBPF20Q3BBV1 942 aa26.71■■□□□ 1.87
LSM7-203ENST00000585409 DEFB128Q7Z7B8 93 aa26.71■■□□□ 1.87
LSM7-203ENST00000585409 RRP36Q96EU6 259 aaKnown RBP26.71■■□□□ 1.87
LSM7-203ENST00000585409 TRIP12Q14669 1992 aaPredicted RBP26.7■■□□□ 1.86
LSM7-203ENST00000585409 A6NJR5 290 aa26.7■■□□□ 1.86
LSM7-203ENST00000585409 PITPNM1O00562 1244 aa26.7■■□□□ 1.86
LSM7-203ENST00000585409 ZBTB5O15062 677 aa26.7■■□□□ 1.86
LSM7-203ENST00000585409 BMP1P13497 986 aa26.7■■□□□ 1.86
LSM7-203ENST00000585409 RXRAP19793 462 aa26.7■■□□□ 1.86
LSM7-203ENST00000585409 NFRKBQ6P4R8 1299 aa26.7■■□□□ 1.86
LSM7-203ENST00000585409 RNF207Q6ZRF8 634 aa26.7■■□□□ 1.86
LSM7-203ENST00000585409 FBXO11Q86XK2 927 aa26.7■■□□□ 1.86
LSM7-203ENST00000585409 ZNF274Q96GC6 653 aaPredicted RBP26.7■■□□□ 1.86
LSM7-203ENST00000585409 AMNQ9BXJ7 453 aa26.7■■□□□ 1.86
LSM7-203ENST00000585409 CPVLQ9H3G5 476 aa26.7■■□□□ 1.86
LSM7-203ENST00000585409 PTPRSQ13332 1948 aa26.7■■□□□ 1.86
LSM7-203ENST00000585409 ABCB11O95342 1321 aa26.69■■□□□ 1.86
LSM7-203ENST00000585409 CA3P07451 260 aa26.69■■□□□ 1.86
LSM7-203ENST00000585409 CALML3P27482 149 aa26.69■■□□□ 1.86
LSM7-203ENST00000585409 TOB2Q14106 344 aaPredicted RBP26.69■■□□□ 1.86
LSM7-203ENST00000585409 QRICH1Q2TAL8 776 aa26.69■■□□□ 1.86
LSM7-203ENST00000585409 TMTC3Q6ZXV5 915 aa26.69■■□□□ 1.86
LSM7-203ENST00000585409 RAB11FIP4Q86YS3 637 aa26.69■■□□□ 1.86
LSM7-203ENST00000585409 SLC9A7Q96T83 725 aa26.69■■□□□ 1.86
LSM7-203ENST00000585409 MAF1Q9H063 256 aa26.69■■□□□ 1.86
LSM7-203ENST00000585409 MTCH2Q9Y6C9 303 aa26.69■■□□□ 1.86
LSM7-203ENST00000585409 KPNA6O60684 536 aa26.68■■□□□ 1.86
LSM7-203ENST00000585409 IQCF3P0C7M6 154 aa26.68■■□□□ 1.86
LSM7-203ENST00000585409 ACTN1P12814 892 aa26.68■■□□□ 1.86
LSM7-203ENST00000585409 RPS6P62753 249 aaKnown RBP26.68■■□□□ 1.86
LSM7-203ENST00000585409 PTPN11Q06124 597 aaPredicted RBP26.68■■□□□ 1.86
LSM7-203ENST00000585409 PDE4DQ08499 809 aa26.68■■□□□ 1.86
LSM7-203ENST00000585409 RABEP1Q15276 862 aa26.68■■□□□ 1.86
LSM7-203ENST00000585409 BRDTQ58F21 947 aaPredicted RBP26.68■■□□□ 1.86
LSM7-203ENST00000585409 CPLX2Q6PUV4 134 aaKnown RBP26.68■■□□□ 1.86
LSM7-203ENST00000585409 HOMER1Q86YM7 354 aa26.68■■□□□ 1.86
LSM7-203ENST00000585409 MICALL1Q8N3F8 863 aa26.68■■□□□ 1.86
LSM7-203ENST00000585409 DNERQ8NFT8 737 aa26.68■■□□□ 1.86
LSM7-203ENST00000585409 PHOSPHO2Q8TCD6 241 aa26.68■■□□□ 1.86
LSM7-203ENST00000585409 SCFD2Q8WU76 684 aa26.68■■□□□ 1.86
LSM7-203ENST00000585409 MTMR8Q96EF0 704 aa26.68■■□□□ 1.86
LSM7-203ENST00000585409 NID2Q14112 1375 aa26.68■■□□□ 1.86
LSM7-203ENST00000585409 PNMA6FA0A0J9YX94 578 aa26.67■■□□□ 1.86
LSM7-203ENST00000585409 TFF2Q03403 129 aa26.67■■□□□ 1.86
LSM7-203ENST00000585409 FAM47CQ5HY64 1035 aa26.67■■□□□ 1.86
LSM7-203ENST00000585409 RAPGEFL1Q9UHV5 662 aa26.67■■□□□ 1.86
LSM7-203ENST00000585409 MRPL11Q9Y3B7 192 aaKnown RBP26.67■■□□□ 1.86
LSM7-203ENST00000585409 RFXAPO00287 272 aa26.66■■□□□ 1.86
LSM7-203ENST00000585409 AAK1Q2M2I8 961 aa26.66■■□□□ 1.86
LSM7-203ENST00000585409 COPS5Q92905 334 aa26.66■■□□□ 1.86
LSM7-203ENST00000585409 NECAB3Q96P71 396 aaPredicted RBP26.66■■□□□ 1.86
LSM7-203ENST00000585409 PIGSQ96S52 555 aa26.66■■□□□ 1.86
LSM7-203ENST00000585409 MPHOSPH6Q99547 160 aaKnown RBP26.66■■□□□ 1.86
LSM7-203ENST00000585409 EPOPA6NHQ4 379 aa26.65■■□□□ 1.86
LSM7-203ENST00000585409 PLEKHA8P1O95397 391 aa26.65■■□□□ 1.86
LSM7-203ENST00000585409 PDIA3P30101 505 aaKnown RBP26.65■■□□□ 1.86
LSM7-203ENST00000585409 USH1GQ495M9 461 aa26.65■■□□□ 1.86
LSM7-203ENST00000585409 MCF2L2Q86YR7 1114 aa26.65■■□□□ 1.86
LSM7-203ENST00000585409 SRBD1Q8N5C6 995 aaKnown RBP26.65■■□□□ 1.86
LSM7-203ENST00000585409 RETREG2Q8NC44 543 aa26.65■■□□□ 1.86
LSM7-203ENST00000585409 PPP1R13LQ8WUF5 828 aa26.65■■□□□ 1.86
LSM7-203ENST00000585409 TBC1D32Q96NH3 1257 aa26.65■■□□□ 1.86
LSM7-203ENST00000585409 KIAA1217Q5T5P2 1943 aa26.65■■□□□ 1.86
LSM7-203ENST00000585409 CPLX1O14810 134 aa26.64■■□□□ 1.86
LSM7-203ENST00000585409 CYTH3O43739 400 aa26.64■■□□□ 1.86
LSM7-203ENST00000585409 ST18O60284 1047 aa26.64■■□□□ 1.86
LSM7-203ENST00000585409 TXNP10599 105 aaKnown RBP26.64■■□□□ 1.86
LSM7-203ENST00000585409 KCNQ1P51787 676 aa26.64■■□□□ 1.86
LSM7-203ENST00000585409 AK2P54819 239 aa26.64■■□□□ 1.86
LSM7-203ENST00000585409 AKAP17AQ02040 695 aaKnown RBP26.64■■□□□ 1.86
LSM7-203ENST00000585409 PCDHA1Q9Y5I3 950 aa26.64■■□□□ 1.86
LSM7-203ENST00000585409 GTPBP6O43824 516 aaPredicted RBP26.63■■□□□ 1.85
LSM7-203ENST00000585409 ARHGEF15O94989 841 aa26.63■■□□□ 1.85
LSM7-203ENST00000585409 TAP1Q03518 808 aa26.63■■□□□ 1.85
LSM7-203ENST00000585409 BFSP2Q13515 415 aa26.63■■□□□ 1.85
LSM7-203ENST00000585409 HERC6Q8IVU3 1022 aa26.63■■□□□ 1.85
LSM7-203ENST00000585409 RGS22Q8NE09 1264 aa26.63■■□□□ 1.85
LSM7-203ENST00000585409 SLKQ9H2G2 1235 aaPredicted RBP26.63■■□□□ 1.85
LSM7-203ENST00000585409 CERS4Q9HA82 394 aa26.63■■□□□ 1.85
LSM7-203ENST00000585409 COL4A4P53420 1690 aaPredicted RBP26.63■■□□□ 1.85
LSM7-203ENST00000585409 MYH6P13533 1939 aa26.63■■□□□ 1.85
LSM7-203ENST00000585409 ARIH2O95376 493 aa26.62■■□□□ 1.85
LSM7-203ENST00000585409 CCDC82Q8N4S0 544 aa26.62■■□□□ 1.85
LSM7-203ENST00000585409 SAMD3Q8N6K7 520 aa26.62■■□□□ 1.85
LSM7-203ENST00000585409 CTAGE1Q96RT6 745 aa26.62■■□□□ 1.85
LSM7-203ENST00000585409 B4DLN1 442 aa26.61■■□□□ 1.85
LSM7-203ENST00000585409 hCG_1984214I3L0E3 225 aa26.61■■□□□ 1.85
LSM7-203ENST00000585409 CDKL5O76039 1030 aa26.61■■□□□ 1.85
LSM7-203ENST00000585409 BAIAP3O94812 1187 aa26.61■■□□□ 1.85
LSM7-203ENST00000585409 MRPL12P52815 198 aaKnown RBP26.61■■□□□ 1.85
LSM7-203ENST00000585409 CCDC62Q6P9F0 684 aa26.61■■□□□ 1.85
LSM7-203ENST00000585409 ZNF713Q8N859 430 aaPredicted RBP26.61■■□□□ 1.85
LSM7-203ENST00000585409 PIBF1Q8WXW3 757 aa26.61■■□□□ 1.85
LSM7-203ENST00000585409 FTOQ9C0B1 505 aaKnown RBP eCLIP26.61■■□□□ 1.85
LSM7-203ENST00000585409 CDC27P30260 824 aa26.6■■□□□ 1.85
LSM7-203ENST00000585409 ADD1P35611 737 aaKnown RBP26.6■■□□□ 1.85
LSM7-203ENST00000585409 CCT2P78371 535 aaKnown RBP26.6■■□□□ 1.85
LSM7-203ENST00000585409 SKIV2LQ15477 1246 aaKnown RBP26.6■■□□□ 1.85
LSM7-203ENST00000585409 SESTD1Q86VW0 696 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms