RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 ZNF396Q96N95 335 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-216ENST00000583804 NAP1L4Q99733 375 aaKnown RBP12.42□□□□□ -0.42
TOP3A-216ENST00000583804 JADE2Q9NQC1 790 aa12.42□□□□□ -0.42
TOP3A-216ENST00000583804 PDGFCQ9NRA1 345 aa12.42□□□□□ -0.42
TOP3A-216ENST00000583804 PKD2L1Q9P0L9 805 aa12.42□□□□□ -0.42
TOP3A-216ENST00000583804 DDX25Q9UHL0 483 aaKnown RBP12.42□□□□□ -0.42
TOP3A-216ENST00000583804 PCDHB6Q9Y5E3 794 aa12.42□□□□□ -0.42
TOP3A-216ENST00000583804 MRVI1Q9Y6F6 885 aa12.42□□□□□ -0.42
TOP3A-216ENST00000583804 CYP3A7-CYP3A51PA0A087WV96 503 aa12.41□□□□□ -0.42
TOP3A-216ENST00000583804 MEIS1O00470 390 aa12.41□□□□□ -0.42
TOP3A-216ENST00000583804 MARCH6O60337 910 aa12.41□□□□□ -0.42
TOP3A-216ENST00000583804 MYCP01106 439 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-216ENST00000583804 INHAP05111 366 aa12.41□□□□□ -0.42
TOP3A-216ENST00000583804 ARP10275 920 aa12.41□□□□□ -0.42
TOP3A-216ENST00000583804 PRKAR2AP13861 404 aaKnown RBP12.41□□□□□ -0.42
TOP3A-216ENST00000583804 GCFC2P16383 781 aaKnown RBP12.41□□□□□ -0.42
TOP3A-216ENST00000583804 CYP3A7P24462 503 aa12.41□□□□□ -0.42
TOP3A-216ENST00000583804 STK38Q15208 465 aa12.41□□□□□ -0.42
TOP3A-216ENST00000583804 SF3A1Q15459 793 aaKnown RBP12.41□□□□□ -0.42
TOP3A-216ENST00000583804 PPP4R3AQ6IN85 833 aa12.41□□□□□ -0.42
TOP3A-216ENST00000583804 TAPT1Q6NXT6 567 aa12.41□□□□□ -0.42
TOP3A-216ENST00000583804 TNS4Q8IZW8 715 aa12.41□□□□□ -0.42
TOP3A-216ENST00000583804 SCFD2Q8WU76 684 aa12.41□□□□□ -0.42
TOP3A-216ENST00000583804 SPATA32Q96LK8 384 aa12.41□□□□□ -0.42
TOP3A-216ENST00000583804 INPP4AQ96PE3 977 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-216ENST00000583804 KATNBL1Q9H079 304 aa12.41□□□□□ -0.42
TOP3A-216ENST00000583804 SLC37A4O43826 429 aa12.4□□□□□ -0.42
TOP3A-216ENST00000583804 GADD45BO75293 160 aaPredicted RBP12.4□□□□□ -0.42
TOP3A-216ENST00000583804 RGS20O76081 388 aa12.4□□□□□ -0.42
TOP3A-216ENST00000583804 IGHA2P01877 340 aa12.4□□□□□ -0.42
TOP3A-216ENST00000583804 ZNF865P0CJ78 1059 aaPredicted RBP12.4□□□□□ -0.42
TOP3A-216ENST00000583804 MARCKSP29966 332 aaPredicted RBP12.4□□□□□ -0.42
TOP3A-216ENST00000583804 ADCYAP1R1P41586 468 aa12.4□□□□□ -0.42
TOP3A-216ENST00000583804 TTLL4Q14679 1199 aa12.4□□□□□ -0.42
TOP3A-216ENST00000583804 CCDC144BQ3MJ40 725 aa12.4□□□□□ -0.42
TOP3A-216ENST00000583804 Q4G0T1 1027 aa12.4□□□□□ -0.42
TOP3A-216ENST00000583804 ANO1Q5XXA6 986 aa12.4□□□□□ -0.42
TOP3A-216ENST00000583804 POTEHQ6S545 545 aa12.4□□□□□ -0.42
TOP3A-216ENST00000583804 MOXD1Q6UVY6 613 aa12.4□□□□□ -0.42
TOP3A-216ENST00000583804 TRPV1Q8NER1 839 aa12.4□□□□□ -0.42
TOP3A-216ENST00000583804 LEO1Q8WVC0 666 aaPredicted RBP12.4□□□□□ -0.42
TOP3A-216ENST00000583804 GPRASP2Q96D09 838 aa12.4□□□□□ -0.42
TOP3A-216ENST00000583804 CDHR1Q96JP9 859 aa12.4□□□□□ -0.42
TOP3A-216ENST00000583804 KCNH7Q9NS40 1196 aa12.4□□□□□ -0.42
TOP3A-216ENST00000583804 NRBP1Q9UHY1 535 aa12.4□□□□□ -0.42
TOP3A-216ENST00000583804 IGLV3-22A0A075B6J6 115 aa12.4□□□□□ -0.43
TOP3A-216ENST00000583804 SPATA31C2B4DYI2 1134 aa12.4□□□□□ -0.43
TOP3A-216ENST00000583804 MAFGO15525 162 aa12.4□□□□□ -0.43
TOP3A-216ENST00000583804 NEMFO60524 1076 aa12.4□□□□□ -0.43
TOP3A-216ENST00000583804 TXNP10599 105 aaKnown RBP12.4□□□□□ -0.43
TOP3A-216ENST00000583804 CCND3P30281 292 aaPredicted RBP12.4□□□□□ -0.43
TOP3A-216ENST00000583804 SETQ01105 290 aaPredicted RBP12.4□□□□□ -0.43
TOP3A-216ENST00000583804 CALCRLQ16602 461 aa12.4□□□□□ -0.43
TOP3A-216ENST00000583804 LY6KQ17RY6 165 aa12.4□□□□□ -0.43
TOP3A-216ENST00000583804 IQSEC1Q6DN90 963 aa12.4□□□□□ -0.43
TOP3A-216ENST00000583804 KCNV1Q6PIU1 500 aa12.4□□□□□ -0.43
TOP3A-216ENST00000583804 NIPA1Q7RTP0 329 aa12.4□□□□□ -0.43
TOP3A-216ENST00000583804 MBOAT7Q96N66 472 aa12.4□□□□□ -0.43
TOP3A-216ENST00000583804 ZNF577Q9BSK1 485 aa12.4□□□□□ -0.43
TOP3A-216ENST00000583804 HMX1Q9NP08 348 aaPredicted RBP12.4□□□□□ -0.43
TOP3A-216ENST00000583804 DDX41Q9UJV9 622 aaKnown RBP12.4□□□□□ -0.43
TOP3A-216ENST00000583804 FAM184BQ9ULE4 1060 aa12.4□□□□□ -0.43
TOP3A-216ENST00000583804 MYH7BA7E2Y1 1941 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 MCM3APO60318 1980 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.39□□□□□ -0.43
TOP3A-216ENST00000583804 GOLGA6L22H0YM25 854 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 MSH4O15457 936 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 SORBS3O60504 671 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 ATP9AO75110 1047 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 ARIH2O95376 493 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 TGFB3P10600 412 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 CYBAP13498 195 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 ICAM3P32942 547 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 SP2Q02086 613 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 TNFAIP2Q03169 654 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 SEMA3FQ13275 785 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 TMEM63BQ5T3F8 832 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 MAP3K21Q5TCX8 1036 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 LENG9Q96B70 501 aa12.39□□□□□ -0.43
TOP3A-216ENST00000583804 AGO4Q9HCK5 861 aaKnown RBP12.39□□□□□ -0.43
TOP3A-216ENST00000583804 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.39□□□□□ -0.43
TOP3A-216ENST00000583804 RBM47A0AV96 593 aaKnown RBP12.38□□□□□ -0.43
TOP3A-216ENST00000583804 DDX39AO00148 427 aaKnown RBP12.38□□□□□ -0.43
TOP3A-216ENST00000583804 IPO5O00410 1097 aaKnown RBP12.38□□□□□ -0.43
TOP3A-216ENST00000583804 AKR1A1P14550 325 aa12.38□□□□□ -0.43
TOP3A-216ENST00000583804 SMPD1P17405 629 aa12.38□□□□□ -0.43
TOP3A-216ENST00000583804 ME1P48163 572 aa12.38□□□□□ -0.43
TOP3A-216ENST00000583804 PTGDRQ13258 359 aa12.38□□□□□ -0.43
TOP3A-216ENST00000583804 ORC2Q13416 577 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-216ENST00000583804 GJC2Q5T442 439 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-216ENST00000583804 CCDC62Q6P9F0 684 aa12.38□□□□□ -0.43
TOP3A-216ENST00000583804 COPS5Q92905 334 aa12.38□□□□□ -0.43
TOP3A-216ENST00000583804 GJA10Q969M2 543 aa12.38□□□□□ -0.43
TOP3A-216ENST00000583804 MCOLN1Q9GZU1 580 aa12.38□□□□□ -0.43
TOP3A-216ENST00000583804 TMEM60Q9H2L4 133 aa12.38□□□□□ -0.43
TOP3A-216ENST00000583804 LMBRD1Q9NUN5 540 aa12.38□□□□□ -0.43
TOP3A-216ENST00000583804 CFAP45Q9UL16 551 aa12.38□□□□□ -0.43
TOP3A-216ENST00000583804 CEP131Q9UPN4 1083 aa12.38□□□□□ -0.43
TOP3A-216ENST00000583804 DDX11L8A8MPP1 907 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 SEPT4O43236 478 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms