RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.29□□□□□ -0.6
MKS1-212ENST00000583577 MAP1BP46821 2468 aaKnown RBP11.29□□□□□ -0.6
MKS1-212ENST00000583577 ANKRD11Q6UB99 2663 aaPredicted RBP11.28□□□□□ -0.6
MKS1-212ENST00000583577 DNAH14Q0VDD8 3507 aa11.28□□□□□ -0.6
MKS1-212ENST00000583577 H3BQ06 376 aaPredicted RBP11.28□□□□□ -0.6
MKS1-212ENST00000583577 RANBP6O60518 1105 aaKnown RBP11.28□□□□□ -0.6
MKS1-212ENST00000583577 LARGE1O95461 756 aa11.28□□□□□ -0.6
MKS1-212ENST00000583577 TFAP4Q01664 338 aa11.28□□□□□ -0.6
MKS1-212ENST00000583577 TYRO3Q06418 890 aa11.28□□□□□ -0.6
MKS1-212ENST00000583577 TOB2Q14106 344 aaPredicted RBP11.28□□□□□ -0.6
MKS1-212ENST00000583577 KCTD2Q14681 263 aa11.28□□□□□ -0.6
MKS1-212ENST00000583577 RRP12Q5JTH9 1297 aaKnown RBP11.28□□□□□ -0.6
MKS1-212ENST00000583577 PPP4R3BQ5MIZ7 849 aa11.28□□□□□ -0.6
MKS1-212ENST00000583577 MB21D1Q8N884 522 aa11.28□□□□□ -0.6
MKS1-212ENST00000583577 ATG4CQ96DT6 458 aa11.28□□□□□ -0.6
MKS1-212ENST00000583577 SLC9A7Q96T83 725 aa11.28□□□□□ -0.6
MKS1-212ENST00000583577 TRPV6Q9H1D0 765 aa11.28□□□□□ -0.6
MKS1-212ENST00000583577 MTUS1Q9ULD2 1270 aa11.28□□□□□ -0.6
MKS1-212ENST00000583577 WDR19Q8NEZ3 1342 aa11.28□□□□□ -0.6
MKS1-212ENST00000583577 PLIN4Q96Q06 1357 aa11.28□□□□□ -0.6
MKS1-212ENST00000583577 MYH6P13533 1939 aa11.27□□□□□ -0.6
MKS1-212ENST00000583577 CEP250Q9BV73 2442 aa11.27□□□□□ -0.6
MKS1-212ENST00000583577 PFKFB2O60825 505 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 FGRP09769 529 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 ACTN1P12814 892 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 DSG3P32926 999 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 NT5C2P49902 561 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 BEX3Q00994 111 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 ZP2Q05996 745 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 ST3GAL1Q11201 340 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 PUS10Q3MIT2 529 aaKnown RBP11.27□□□□□ -0.61
MKS1-212ENST00000583577 EP400NLQ6ZTU2 488 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 HERC6Q8IVU3 1022 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 NEDD1Q8NHV4 660 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 LEO1Q8WVC0 666 aaPredicted RBP11.27□□□□□ -0.61
MKS1-212ENST00000583577 ATOH1Q92858 354 aaPredicted RBP11.27□□□□□ -0.61
MKS1-212ENST00000583577 ZNF274Q96GC6 653 aaPredicted RBP11.27□□□□□ -0.61
MKS1-212ENST00000583577 PRRX2Q99811 253 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 CNNM2Q9H8M5 875 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 INCENPQ9NQS7 918 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 MUTYHQ9UIF7 546 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 DIS3Q9Y2L1 958 aaKnown RBP11.27□□□□□ -0.61
MKS1-212ENST00000583577 PAXBP1Q9Y5B6 917 aa11.27□□□□□ -0.61
MKS1-212ENST00000583577 LCHNA4D1U4 455 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 SOWAHBA6NEL2 793 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 KIF2AO00139 706 aaPredicted RBP11.26□□□□□ -0.61
MKS1-212ENST00000583577 ADCY6O43306 1168 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 DHX16O60231 1041 aaKnown RBP11.26□□□□□ -0.61
MKS1-212ENST00000583577 B4GALT4O60513 344 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 FLOT1O75955 427 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 SLC25A27O95847 323 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 SNAI1O95863 264 aaPredicted RBP11.26□□□□□ -0.61
MKS1-212ENST00000583577 EEF2P13639 858 aaKnown RBP11.26□□□□□ -0.61
MKS1-212ENST00000583577 IRS1P35568 1242 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 EVCP57679 992 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 GJA9P57773 515 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 TRDNQ13061 729 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 CXCL17Q6UXB2 119 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 DHX32Q7L7V1 743 aaKnown RBP11.26□□□□□ -0.61
MKS1-212ENST00000583577 CLEC10AQ8IUN9 316 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 TBC1D10CQ8IV04 446 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 SUGP1Q8IWZ8 645 aaKnown RBP11.26□□□□□ -0.61
MKS1-212ENST00000583577 SMAP1Q8IYB5 467 aaPredicted RBP11.26□□□□□ -0.61
MKS1-212ENST00000583577 PDCL2Q8N4E4 241 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 ESR2Q92731 530 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 PBXIP1Q96AQ6 731 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 AGBL1Q96MI9 1066 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 KRT23Q9C075 422 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 KCND1Q9NSA2 647 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 NYAP2Q9P242 653 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 RCOR1Q9UKL0 485 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 MRVI1Q9Y6F6 885 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 FRYLO94915 3013 aa11.26□□□□□ -0.61
MKS1-212ENST00000583577 IGKV6D-41A0A0C4DH26 115 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 A0A1W2PRG0 241 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 H3BQV1 296 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 TTLL1O95922 423 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 PFKMP08237 780 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 CYP21A2P08686 494 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 ID4P47928 161 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 RESTQ13127 1097 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 ITGA7Q13683 1181 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 TMEM132BQ14DG7 1078 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 CCDC144BQ3MJ40 725 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 PLA2G4DQ86XP0 818 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 SLC43A3Q8NBI5 491 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 PHOSPHO2Q8TCD6 241 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 CEP95Q96GE4 821 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 MRFAP1L1Q96HT8 127 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.25□□□□□ -0.61
MKS1-212ENST00000583577 CCDC94Q9BW85 323 aaPredicted RBP11.25□□□□□ -0.61
MKS1-212ENST00000583577 NAT10Q9H0A0 1025 aaKnown RBP11.25□□□□□ -0.61
MKS1-212ENST00000583577 UPF3AQ9H1J1 476 aaKnown RBP11.25□□□□□ -0.61
MKS1-212ENST00000583577 GOPCQ9HD26 462 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 MTMR4Q9NYA4 1195 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 CLIP2Q9UDT6 1046 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 TMX2Q9Y320 296 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 NEDD4P46934 1319 aa11.25□□□□□ -0.61
MKS1-212ENST00000583577 C19orf67A6NJJ6 358 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 B4E1Z4 1266 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms