RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 MORC4Q8TE76 937 aa15.38■□□□□ 0.05
CSNK1D-220ENST00000581737 TAAR1Q96RJ0 339 aa15.38■□□□□ 0.05
CSNK1D-220ENST00000581737 ABHD16BQ9H3Z7 469 aa15.38■□□□□ 0.05
CSNK1D-220ENST00000581737 BRMS1Q9HCU9 246 aa15.38■□□□□ 0.05
CSNK1D-220ENST00000581737 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.38■□□□□ 0.05
CSNK1D-220ENST00000581737 ASTN1O14525 1302 aa15.38■□□□□ 0.05
CSNK1D-220ENST00000581737 FRMPD4Q14CM0 1322 aa15.38■□□□□ 0.05
CSNK1D-220ENST00000581737 XIRP2A4UGR9 3374 aa15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 EIF2AK2P19525 551 aaKnown RBP15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 EDNRBP24530 442 aa15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 SNX17Q15036 470 aa15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 UBE2SQ16763 222 aa15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 XRRA1Q6P2D8 792 aa15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 DAGLBQ8NCG7 672 aa15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 SYAP1Q96A49 352 aaPredicted RBP15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 FERMT2Q96AC1 680 aa15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 AIFM3Q96NN9 605 aa15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 PURBQ96QR8 312 aaKnown RBP15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 ZSCAN16Q9H4T2 348 aaPredicted RBP15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 VTA1Q9NP79 307 aa15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 PDLIM7Q9NR12 457 aa15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 PRKAG2Q9UGJ0 569 aa15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 PCDHA4Q9UN74 947 aa15.37■□□□□ 0.05
CSNK1D-220ENST00000581737 MSCO60682 206 aa15.36■□□□□ 0.05
CSNK1D-220ENST00000581737 STAM2O75886 525 aa15.36■□□□□ 0.05
CSNK1D-220ENST00000581737 CCND2P30279 289 aa15.36■□□□□ 0.05
CSNK1D-220ENST00000581737 ADCYAP1R1P41586 468 aa15.36■□□□□ 0.05
CSNK1D-220ENST00000581737 SAFBQ15424 915 aaKnown RBP eCLIP15.36■□□□□ 0.05
CSNK1D-220ENST00000581737 STXBP2Q15833 593 aa15.36■□□□□ 0.05
CSNK1D-220ENST00000581737 BLIDQ8IZY5 108 aa15.36■□□□□ 0.05
CSNK1D-220ENST00000581737 USP38Q8NB14 1042 aa15.36■□□□□ 0.05
CSNK1D-220ENST00000581737 C8orf76Q96K31 380 aa15.36■□□□□ 0.05
CSNK1D-220ENST00000581737 PDCD2LQ9BRP1 358 aa15.36■□□□□ 0.05
CSNK1D-220ENST00000581737 PHF20Q9BVI0 1012 aa15.36■□□□□ 0.05
CSNK1D-220ENST00000581737 ZHX1Q9UKY1 873 aaPredicted RBP15.36■□□□□ 0.05
CSNK1D-220ENST00000581737 PCDHA6Q9UN73 950 aa15.36■□□□□ 0.05
CSNK1D-220ENST00000581737 PCDHA8Q9Y5H6 950 aa15.36■□□□□ 0.05
CSNK1D-220ENST00000581737 SNAI1O95863 264 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-220ENST00000581737 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-220ENST00000581737 NR3C2P08235 984 aa15.35■□□□□ 0.05
CSNK1D-220ENST00000581737 CLK2P49760 499 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-220ENST00000581737 ACVR2BQ13705 512 aa15.35■□□□□ 0.05
CSNK1D-220ENST00000581737 PKP1Q13835 747 aa15.35■□□□□ 0.05
CSNK1D-220ENST00000581737 GSE1Q14687 1217 aa15.35■□□□□ 0.05
CSNK1D-220ENST00000581737 KLHL40Q2TBA0 621 aa15.35■□□□□ 0.05
CSNK1D-220ENST00000581737 ANO3Q9BYT9 981 aa15.35■□□□□ 0.05
CSNK1D-220ENST00000581737 ZDHHC9Q9Y397 364 aa15.35■□□□□ 0.05
CSNK1D-220ENST00000581737 DDX49Q9Y6V7 483 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-220ENST00000581737 KIAA1217Q5T5P2 1943 aa15.35■□□□□ 0.05
CSNK1D-220ENST00000581737 EIF3JO75822 258 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-220ENST00000581737 FOSL2P15408 326 aa15.34■□□□□ 0.05
CSNK1D-220ENST00000581737 KRT2P35908 639 aa15.34■□□□□ 0.05
CSNK1D-220ENST00000581737 KRT85P78386 507 aa15.34■□□□□ 0.05
CSNK1D-220ENST00000581737 SMAD3P84022 425 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-220ENST00000581737 PGM5Q15124 567 aa15.34■□□□□ 0.05
CSNK1D-220ENST00000581737 LRRC41Q15345 812 aa15.34■□□□□ 0.05
CSNK1D-220ENST00000581737 JAKMIP3Q5VZ66 844 aa15.34■□□□□ 0.05
CSNK1D-220ENST00000581737 PCNX4Q63HM2 1172 aa15.34■□□□□ 0.05
CSNK1D-220ENST00000581737 KRT25Q7Z3Z0 450 aa15.34■□□□□ 0.05
CSNK1D-220ENST00000581737 VSIG10LQ86VR7 867 aa15.34■□□□□ 0.05
CSNK1D-220ENST00000581737 RAPGEFL1Q9UHV5 662 aa15.34■□□□□ 0.05
CSNK1D-220ENST00000581737 KCNJ14Q9UNX9 436 aa15.34■□□□□ 0.05
CSNK1D-220ENST00000581737 MTMR6Q9Y217 621 aa15.34■□□□□ 0.05
CSNK1D-220ENST00000581737 SEPT4O43236 478 aa15.33■□□□□ 0.04
CSNK1D-220ENST00000581737 DTNBO60941 627 aa15.33■□□□□ 0.04
CSNK1D-220ENST00000581737 MMP1P03956 469 aa15.33■□□□□ 0.04
CSNK1D-220ENST00000581737 MYCLP12524 364 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-220ENST00000581737 AKR1A1P14550 325 aa15.33■□□□□ 0.04
CSNK1D-220ENST00000581737 SREBF1P36956 1147 aa15.33■□□□□ 0.04
CSNK1D-220ENST00000581737 TLE2Q04725 743 aa15.33■□□□□ 0.04
CSNK1D-220ENST00000581737 GRIN2CQ14957 1233 aa15.33■□□□□ 0.04
CSNK1D-220ENST00000581737 GNPTABQ3T906 1256 aa15.33■□□□□ 0.04
CSNK1D-220ENST00000581737 KRT40Q6A162 431 aa15.33■□□□□ 0.04
CSNK1D-220ENST00000581737 ATL3Q6DD88 541 aa15.33■□□□□ 0.04
CSNK1D-220ENST00000581737 ARRDC4Q8NCT1 418 aa15.33■□□□□ 0.04
CSNK1D-220ENST00000581737 SCFD2Q8WU76 684 aa15.33■□□□□ 0.04
CSNK1D-220ENST00000581737 TMEM260Q9NX78 707 aa15.33■□□□□ 0.04
CSNK1D-220ENST00000581737 FAM184BQ9ULE4 1060 aa15.33■□□□□ 0.04
CSNK1D-220ENST00000581737 CCDC194A0A1B0GVG4 234 aa15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 KBTBD13C9JR72 458 aa15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 ZNF865P0CJ78 1059 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 FOSBP53539 338 aa15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 NPY5RQ15761 445 aa15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 FOXD4L5Q5VV16 416 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 KCNV1Q6PIU1 500 aa15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 EEPD1Q7L9B9 569 aa15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 FBXO16Q8IX29 292 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 TMEM87AQ8NBN3 555 aa15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 FBXO18Q8NFZ0 1043 aa15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 IL31RAQ8NI17 732 aa15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 FOXD4L4Q8WXT5 416 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 SCAND2PQ9GZW5 306 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 KATNBL1Q9H079 304 aa15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 MYH7BA7E2Y1 1941 aa15.32■□□□□ 0.04
CSNK1D-220ENST00000581737 RARBP10826 455 aa15.31■□□□□ 0.04
CSNK1D-220ENST00000581737 ARHGAP4P98171 946 aa15.31■□□□□ 0.04
CSNK1D-220ENST00000581737 GNL2Q13823 731 aaKnown RBP15.31■□□□□ 0.04
CSNK1D-220ENST00000581737 TTLL4Q14679 1199 aa15.31■□□□□ 0.04
CSNK1D-220ENST00000581737 NONOQ15233 471 aaKnown RBP eCLIP15.31■□□□□ 0.049e-7■■■■□ 23.1
CSNK1D-220ENST00000581737 CCDC144BQ3MJ40 725 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms