RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 GTF2IRD1Q9UHL9 959 aa24.16■■□□□ 1.46
CCDC42-203ENST00000581598 SLC4A7Q9Y6M7 1214 aa24.16■■□□□ 1.46
CCDC42-203ENST00000581598 MYO9BQ13459 2157 aa24.15■■□□□ 1.46
CCDC42-203ENST00000581598 CCDC69A6NI79 296 aa24.15■■□□□ 1.46
CCDC42-203ENST00000581598 PIK3CDO00329 1044 aa24.15■■□□□ 1.46
CCDC42-203ENST00000581598 PSEN2P49810 448 aa24.15■■□□□ 1.46
CCDC42-203ENST00000581598 AFAP1L1Q8TED9 768 aa24.15■■□□□ 1.46
CCDC42-203ENST00000581598 GGPS1O95749 300 aa24.14■■□□□ 1.45
CCDC42-203ENST00000581598 ACTN1P12814 892 aa24.14■■□□□ 1.45
CCDC42-203ENST00000581598 UBA1P22314 1058 aaKnown RBP24.14■■□□□ 1.45
CCDC42-203ENST00000581598 ICAM3P32942 547 aa24.14■■□□□ 1.45
CCDC42-203ENST00000581598 SP2Q02086 613 aa24.14■■□□□ 1.45
CCDC42-203ENST00000581598 COL9A3Q14050 684 aaPredicted RBP24.14■■□□□ 1.45
CCDC42-203ENST00000581598 MFSD10Q14728 455 aa24.14■■□□□ 1.45
CCDC42-203ENST00000581598 GNPTABQ3T906 1256 aa24.14■■□□□ 1.45
CCDC42-203ENST00000581598 RNF20Q5VTR2 975 aa24.14■■□□□ 1.45
CCDC42-203ENST00000581598 NFXL1Q6ZNB6 911 aa24.14■■□□□ 1.45
CCDC42-203ENST00000581598 SGMS1Q86VZ5 419 aa24.14■■□□□ 1.45
CCDC42-203ENST00000581598 INPP4AQ96PE3 977 aaPredicted RBP24.14■■□□□ 1.45
CCDC42-203ENST00000581598 SEC63Q9UGP8 760 aaKnown RBP24.14■■□□□ 1.45
CCDC42-203ENST00000581598 TET1Q8NFU7 2136 aa24.14■■□□□ 1.45
CCDC42-203ENST00000581598 PRUNE2Q8WUY3 3088 aa24.13■■□□□ 1.45
CCDC42-203ENST00000581598 PARNO95453 639 aaKnown RBP24.13■■□□□ 1.45
CCDC42-203ENST00000581598 CHMP4BP1P59074 171 aa24.13■■□□□ 1.45
CCDC42-203ENST00000581598 MRPS9P82933 396 aaKnown RBP24.13■■□□□ 1.45
CCDC42-203ENST00000581598 KIAA0753Q2KHM9 967 aa24.13■■□□□ 1.45
CCDC42-203ENST00000581598 HSDL1Q3SXM5 330 aa24.13■■□□□ 1.45
CCDC42-203ENST00000581598 DEFB128Q7Z7B8 93 aa24.13■■□□□ 1.45
CCDC42-203ENST00000581598 SRBD1Q8N5C6 995 aaKnown RBP24.13■■□□□ 1.45
CCDC42-203ENST00000581598 C7orf31Q8N865 590 aa24.13■■□□□ 1.45
CCDC42-203ENST00000581598 PIBF1Q8WXW3 757 aa24.13■■□□□ 1.45
CCDC42-203ENST00000581598 SPATA33Q96N06 139 aa24.13■■□□□ 1.45
CCDC42-203ENST00000581598 HDAC6Q9UBN7 1215 aa24.13■■□□□ 1.45
CCDC42-203ENST00000581598 PCDHA11Q9Y5I1 949 aa24.13■■□□□ 1.45
CCDC42-203ENST00000581598 PLEKHA8P1O95397 391 aa24.12■■□□□ 1.45
CCDC42-203ENST00000581598 ZNF286BP0CG31 522 aa24.12■■□□□ 1.45
CCDC42-203ENST00000581598 XRRA1Q6P2D8 792 aa24.12■■□□□ 1.45
CCDC42-203ENST00000581598 DHX38Q92620 1227 aaKnown RBP24.12■■□□□ 1.45
CCDC42-203ENST00000581598 CUL5Q93034 780 aa24.12■■□□□ 1.45
CCDC42-203ENST00000581598 YBX2Q9Y2T7 364 aaKnown RBP24.12■■□□□ 1.45
CCDC42-203ENST00000581598 SLC12A7Q9Y666 1083 aa24.12■■□□□ 1.45
CCDC42-203ENST00000581598 SPTBN5Q9NRC6 3674 aaKnown RBP24.12■■□□□ 1.45
CCDC42-203ENST00000581598 ZBBXA8MT70 800 aa24.11■■□□□ 1.45
CCDC42-203ENST00000581598 MEIS2O14770 477 aa24.11■■□□□ 1.45
CCDC42-203ENST00000581598 ATP2A2P16615 1042 aaKnown RBP24.11■■□□□ 1.45
CCDC42-203ENST00000581598 TSGA10IPQ3SY00 556 aa24.11■■□□□ 1.45
CCDC42-203ENST00000581598 SMARCC2Q8TAQ2 1214 aa24.11■■□□□ 1.45
CCDC42-203ENST00000581598 PHOSPHO2Q8TCD6 241 aa24.11■■□□□ 1.45
CCDC42-203ENST00000581598 GPKOWQ92917 476 aaPredicted RBP eCLIP24.11■■□□□ 1.45
CCDC42-203ENST00000581598 ALG1Q9BT22 464 aa24.11■■□□□ 1.45
CCDC42-203ENST00000581598 NKX2-4Q9H2Z4 354 aa24.11■■□□□ 1.45
CCDC42-203ENST00000581598 MLXIPQ9HAP2 919 aa24.11■■□□□ 1.45
CCDC42-203ENST00000581598 SLC28A3Q9HAS3 691 aa24.11■■□□□ 1.45
CCDC42-203ENST00000581598 SPATA31C2B4DYI2 1134 aa24.1■■□□□ 1.45
CCDC42-203ENST00000581598 SELPP16109 830 aa24.1■■□□□ 1.45
CCDC42-203ENST00000581598 PTK7Q13308 1070 aa24.1■■□□□ 1.45
CCDC42-203ENST00000581598 NEDD9Q14511 834 aa24.1■■□□□ 1.45
CCDC42-203ENST00000581598 PCNX4Q63HM2 1172 aa24.1■■□□□ 1.45
CCDC42-203ENST00000581598 SLC9A7Q96T83 725 aa24.1■■□□□ 1.45
CCDC42-203ENST00000581598 GAS2L1Q99501 681 aaPredicted RBP24.1■■□□□ 1.45
CCDC42-203ENST00000581598 C16orf70Q9BSU1 422 aa24.1■■□□□ 1.45
CCDC42-203ENST00000581598 FIBPO43427 364 aa24.09■■□□□ 1.45
CCDC42-203ENST00000581598 BAIAP3O94812 1187 aa24.09■■□□□ 1.45
CCDC42-203ENST00000581598 USP17L6PQ6QN14 398 aa24.09■■□□□ 1.45
CCDC42-203ENST00000581598 TMTC3Q6ZXV5 915 aa24.09■■□□□ 1.45
CCDC42-203ENST00000581598 LRRC8DQ7L1W4 858 aa24.09■■□□□ 1.45
CCDC42-203ENST00000581598 FANCBQ8NB91 859 aa24.09■■□□□ 1.45
CCDC42-203ENST00000581598 ZFP91Q96JP5 570 aaPredicted RBP24.09■■□□□ 1.45
CCDC42-203ENST00000581598 RXRAP19793 462 aa24.08■■□□□ 1.45
CCDC42-203ENST00000581598 SEMA3FQ13275 785 aa24.08■■□□□ 1.45
CCDC42-203ENST00000581598 METTL7BQ6UX53 244 aa24.08■■□□□ 1.45
CCDC42-203ENST00000581598 NEK1Q96PY6 1258 aa24.08■■□□□ 1.45
CCDC42-203ENST00000581598 SENP7Q9BQF6 1050 aa24.08■■□□□ 1.45
CCDC42-203ENST00000581598 FTOQ9C0B1 505 aaKnown RBP eCLIP24.08■■□□□ 1.45
CCDC42-203ENST00000581598 PRDM12Q9H4Q4 367 aa24.08■■□□□ 1.45
CCDC42-203ENST00000581598 DOCK5Q9H7D0 1870 aa24.08■■□□□ 1.45
CCDC42-203ENST00000581598 CDC45O75419 566 aa24.07■■□□□ 1.44
CCDC42-203ENST00000581598 CXCL10P02778 98 aa24.07■■□□□ 1.44
CCDC42-203ENST00000581598 CKBP12277 381 aa24.07■■□□□ 1.44
CCDC42-203ENST00000581598 HOXC8P31273 242 aa24.07■■□□□ 1.44
CCDC42-203ENST00000581598 RABGGTBP53611 331 aa24.07■■□□□ 1.44
CCDC42-203ENST00000581598 EXOSC10Q01780 885 aaKnown RBP24.07■■□□□ 1.44
CCDC42-203ENST00000581598 GPNMBQ14956 572 aa24.07■■□□□ 1.44
CCDC42-203ENST00000581598 TRIM71Q2Q1W2 868 aaKnown RBP24.07■■□□□ 1.44
CCDC42-203ENST00000581598 LRRC2Q9BYS8 371 aa24.07■■□□□ 1.44
CCDC42-203ENST00000581598 PSTPIP2Q9H939 334 aa24.07■■□□□ 1.44
CCDC42-203ENST00000581598 SYNE3Q6ZMZ3 975 aa24.06■■□□□ 1.44
CCDC42-203ENST00000581598 DHX32Q7L7V1 743 aaKnown RBP24.06■■□□□ 1.44
CCDC42-203ENST00000581598 TEX2Q8IWB9 1127 aa24.06■■□□□ 1.44
CCDC42-203ENST00000581598 CMTR1Q8N1G2 835 aaKnown RBP24.06■■□□□ 1.44
CCDC42-203ENST00000581598 USP26Q9BXU7 913 aa24.06■■□□□ 1.44
CCDC42-203ENST00000581598 RBM28Q9NW13 759 aaKnown RBP24.06■■□□□ 1.44
CCDC42-203ENST00000581598 H3BRB1 525 aa24.05■■□□□ 1.44
CCDC42-203ENST00000581598 SORBS3O60504 671 aa24.05■■□□□ 1.44
CCDC42-203ENST00000581598 LGALS2P05162 132 aa24.05■■□□□ 1.44
CCDC42-203ENST00000581598 KRT32Q14532 448 aa24.05■■□□□ 1.44
CCDC42-203ENST00000581598 APOA5Q6Q788 366 aa24.05■■□□□ 1.44
CCDC42-203ENST00000581598 NLRX1Q86UT6 975 aa24.05■■□□□ 1.44
CCDC42-203ENST00000581598 MICU3Q86XE3 530 aa24.05■■□□□ 1.44
CCDC42-203ENST00000581598 GPR20Q99678 358 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms