RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 SCLYQ96I15 445 aa6.69□□□□□ -1.34
SMCHD1-204ENST00000581226 CNTD2Q9H8S5 307 aa6.69□□□□□ -1.34
SMCHD1-204ENST00000581226 PALD1Q9ULE6 856 aa6.69□□□□□ -1.34
SMCHD1-204ENST00000581226 CD2APQ9Y5K6 639 aa6.69□□□□□ -1.34
SMCHD1-204ENST00000581226 ARVCFO00192 962 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 ETV2O00321 342 aaPredicted RBP6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 KRIT1O00522 736 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 ENPP3O14638 875 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 COL6A2P12110 1019 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 CDR1P51861 262 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 NCKAP1LP55160 1127 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 DLG4P78352 724 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 ST5P78524 1137 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 PABPC4Q13310 644 aaKnown RBP eCLIP6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 C21orf62-AS1Q17RA5 79 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 TKFCQ3LXA3 575 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 SDE2Q6IQ49 451 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 OTOP3Q7RTS5 596 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 FGD2Q7Z6J4 655 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 NLGN1Q8N2Q7 840 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 FBXW5Q969U6 566 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 TRIM39Q9HCM9 518 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 SLC6A20Q9NP91 592 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 CATSPERZQ9NTU4 200 aa6.68□□□□□ -1.34
SMCHD1-204ENST00000581226 TCRBV16S1A1N1A0A5B0 115 aa6.67□□□□□ -1.34
SMCHD1-204ENST00000581226 NFIBO00712 420 aa6.67□□□□□ -1.34
SMCHD1-204ENST00000581226 RFPL3O75679 317 aa6.67□□□□□ -1.34
SMCHD1-204ENST00000581226 EMC4Q5J8M3 183 aa6.67□□□□□ -1.34
SMCHD1-204ENST00000581226 MZB1Q8WU39 189 aa6.67□□□□□ -1.34
SMCHD1-204ENST00000581226 PPP1R16BQ96T49 567 aa6.67□□□□□ -1.34
SMCHD1-204ENST00000581226 GCM1Q9NP62 436 aa6.67□□□□□ -1.34
SMCHD1-204ENST00000581226 PLA2G2DQ9UNK4 145 aa6.67□□□□□ -1.34
SMCHD1-204ENST00000581226 ZNF652Q9Y2D9 606 aa6.67□□□□□ -1.34
SMCHD1-204ENST00000581226 WNT9AO14904 365 aa6.66□□□□□ -1.34
SMCHD1-204ENST00000581226 N4BP3O15049 544 aa6.66□□□□□ -1.34
SMCHD1-204ENST00000581226 GSTA4O15217 222 aa6.66□□□□□ -1.34
SMCHD1-204ENST00000581226 MAFKO60675 156 aa6.66□□□□□ -1.34
SMCHD1-204ENST00000581226 TADA3O75528 432 aa6.66□□□□□ -1.34
SMCHD1-204ENST00000581226 PYGMP11217 842 aa6.66□□□□□ -1.34
SMCHD1-204ENST00000581226 DNM2P50570 870 aa6.66□□□□□ -1.34
SMCHD1-204ENST00000581226 EPHB3P54753 998 aa6.66□□□□□ -1.34
SMCHD1-204ENST00000581226 TARBP2Q15633 366 aaKnown RBP6.66□□□□□ -1.34
SMCHD1-204ENST00000581226 PKN1Q16512 942 aa6.66□□□□□ -1.34
SMCHD1-204ENST00000581226 FAM47CQ5HY64 1035 aa6.66□□□□□ -1.34
SMCHD1-204ENST00000581226 FEZ1Q99689 392 aa6.66□□□□□ -1.34
SMCHD1-204ENST00000581226 SMOC1Q9H4F8 434 aa6.66□□□□□ -1.34
SMCHD1-204ENST00000581226 MYOTQ9UBF9 498 aa6.66□□□□□ -1.34
SMCHD1-204ENST00000581226 PCDHB4Q9Y5E5 795 aa6.66□□□□□ -1.34
SMCHD1-204ENST00000581226 CCDC66A2RUB6 948 aa6.65□□□□□ -1.34
SMCHD1-204ENST00000581226 SLC27A2O14975 620 aa6.65□□□□□ -1.34
SMCHD1-204ENST00000581226 NKRFO15226 690 aaKnown RBP eCLIP6.65□□□□□ -1.34
SMCHD1-204ENST00000581226 ASGR2P07307 311 aa6.65□□□□□ -1.34
SMCHD1-204ENST00000581226 NCAM1P13591 858 aa6.65□□□□□ -1.34
SMCHD1-204ENST00000581226 PFKLP17858 780 aa6.65□□□□□ -1.34
SMCHD1-204ENST00000581226 GLDCP23378 1020 aa6.65□□□□□ -1.34
SMCHD1-204ENST00000581226 PMLP29590 882 aa6.65□□□□□ -1.34
SMCHD1-204ENST00000581226 CRY1Q16526 586 aa6.65□□□□□ -1.34
SMCHD1-204ENST00000581226 CYP4F22Q6NT55 531 aa6.65□□□□□ -1.34
SMCHD1-204ENST00000581226 ATG14Q6ZNE5 492 aa6.65□□□□□ -1.34
SMCHD1-204ENST00000581226 C16orf59Q7L2K0 433 aa6.65□□□□□ -1.34
SMCHD1-204ENST00000581226 PCDHA5Q9Y5H7 936 aa6.65□□□□□ -1.34
SMCHD1-204ENST00000581226 IRS2Q9Y4H2 1338 aa6.65□□□□□ -1.35
SMCHD1-204ENST00000581226 TCRBV5S2A0A599 114 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 TCAF2A6NFQ2 919 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 OPA1O60313 960 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 BUB1BO60566 1050 aaPredicted RBP6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 DNAJC8O75937 253 aaPredicted RBP6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 ASLP04424 464 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 C1QTNF9P0C862 333 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 MED14OSP0DP75 135 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 SDSP20132 328 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 FBLN1P23142 703 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 IGFALSP35858 605 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 GPR19Q15760 415 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 HABP4Q5JVS0 413 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 AMIGO3Q86WK7 504 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 IGDCC3Q8IVU1 814 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 BHLHE22Q8NFJ8 381 aaPredicted RBP6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 UHMK1Q8TAS1 419 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 PHOSPHO1Q8TCT1 267 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 NINJ1Q92982 152 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 YIPF4Q9BSR8 244 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 RNF38Q9H0F5 515 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 DSEQ9UL01 958 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 CBLCQ9ULV8 474 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 FAN1Q9Y2M0 1017 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 COQ6Q9Y2Z9 468 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 NUB1Q9Y5A7 615 aa6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 TNPO3Q9Y5L0 923 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-204ENST00000581226 B4E1Z4 1266 aa6.63□□□□□ -1.35
SMCHD1-204ENST00000581226 SMARCA5O60264 1052 aaPredicted RBP6.63□□□□□ -1.35
SMCHD1-204ENST00000581226 CLSTN1O94985 981 aa6.63□□□□□ -1.35
SMCHD1-204ENST00000581226 TSPAN15O95858 294 aa6.63□□□□□ -1.35
SMCHD1-204ENST00000581226 KRT1P04264 644 aa6.63□□□□□ -1.35
SMCHD1-204ENST00000581226 CKMP06732 381 aa6.63□□□□□ -1.35
SMCHD1-204ENST00000581226 PDE6AP16499 860 aa6.63□□□□□ -1.35
SMCHD1-204ENST00000581226 KCNA6P17658 529 aa6.63□□□□□ -1.35
SMCHD1-204ENST00000581226 KRT15P19012 456 aa6.63□□□□□ -1.35
SMCHD1-204ENST00000581226 HSD3B2P26439 372 aa6.63□□□□□ -1.35
SMCHD1-204ENST00000581226 MC3RP41968 323 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms