RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 LENG1Q96BZ8 264 aaPredicted RBP17.18■□□□□ 0.34
MKS1-210ENST00000581180 ABHD8Q96I13 439 aa17.18■□□□□ 0.34
MKS1-210ENST00000581180 POTEFA5A3E0 1075 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 VPS37CA5D8V6 355 aaPredicted RBP17.17■□□□□ 0.34
MKS1-210ENST00000581180 WNT7AO00755 349 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 MAFGO15525 162 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 DUSP11O75319 330 aaKnown RBP17.17■□□□□ 0.34
MKS1-210ENST00000581180 TDP2O95551 362 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 GJB1P08034 283 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 ARP10275 920 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 TXNP10599 105 aaKnown RBP17.17■□□□□ 0.34
MKS1-210ENST00000581180 PTGS1P23219 599 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 ZNF76P36508 570 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 SP2Q02086 613 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 LY6KQ17RY6 165 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 Q4G0T1 1027 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 GJC2Q5T442 439 aaPredicted RBP17.17■□□□□ 0.34
MKS1-210ENST00000581180 ANO1Q5XXA6 986 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 MCTP1Q6DN14 999 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 PPP4R3AQ6IN85 833 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 PLA2G4DQ86XP0 818 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 COPS5Q92905 334 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 CDHR1Q96JP9 859 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 DEFB118Q96PH6 123 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 Q9Y3F1 56 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 MRVI1Q9Y6F6 885 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 TCHHQ07283 1943 aa17.17■□□□□ 0.34
MKS1-210ENST00000581180 NKRFO15226 690 aaKnown RBP eCLIP17.16■□□□□ 0.34
MKS1-210ENST00000581180 ATP9AO75110 1047 aa17.16■□□□□ 0.34
MKS1-210ENST00000581180 RARBP10826 455 aa17.16■□□□□ 0.34
MKS1-210ENST00000581180 PDIA4P13667 645 aaKnown RBP17.16■□□□□ 0.34
MKS1-210ENST00000581180 UBA1P22314 1058 aaKnown RBP17.16■□□□□ 0.34
MKS1-210ENST00000581180 NKX3-2P78367 333 aa17.16■□□□□ 0.34
MKS1-210ENST00000581180 MTMR1Q13613 665 aa17.16■□□□□ 0.34
MKS1-210ENST00000581180 GNL2Q13823 731 aaKnown RBP17.16■□□□□ 0.34
MKS1-210ENST00000581180 LETM2Q2VYF4 491 aa17.16■□□□□ 0.34
MKS1-210ENST00000581180 TNS4Q8IZW8 715 aa17.16■□□□□ 0.34
MKS1-210ENST00000581180 SENP7Q9BQF6 1050 aa17.16■□□□□ 0.34
MKS1-210ENST00000581180 CRISPLD2Q9H0B8 497 aa17.16■□□□□ 0.34
MKS1-210ENST00000581180 UPF3AQ9H1J1 476 aaKnown RBP17.16■□□□□ 0.34
MKS1-210ENST00000581180 KCNH7Q9NS40 1196 aa17.16■□□□□ 0.34
MKS1-210ENST00000581180 MYH9P35579 1960 aaKnown RBP17.15■□□□□ 0.34
MKS1-210ENST00000581180 ADAMTS4O75173 837 aa17.15■□□□□ 0.34
MKS1-210ENST00000581180 SGPL1O95470 568 aa17.15■□□□□ 0.34
MKS1-210ENST00000581180 GCFC2P16383 781 aaKnown RBP17.15■□□□□ 0.34
MKS1-210ENST00000581180 KCNA2P16389 499 aa17.15■□□□□ 0.34
MKS1-210ENST00000581180 TRAPPC10P48553 1259 aa17.15■□□□□ 0.34
MKS1-210ENST00000581180 TOB1P50616 345 aaPredicted RBP17.15■□□□□ 0.34
MKS1-210ENST00000581180 GJA9P57773 515 aa17.15■□□□□ 0.34
MKS1-210ENST00000581180 SETQ01105 290 aaPredicted RBP17.15■□□□□ 0.34
MKS1-210ENST00000581180 RESTQ13127 1097 aa17.15■□□□□ 0.34
MKS1-210ENST00000581180 PRR16Q569H4 304 aa17.15■□□□□ 0.34
MKS1-210ENST00000581180 NAP1L4Q99733 375 aaKnown RBP17.15■□□□□ 0.34
MKS1-210ENST00000581180 BCAS3Q9H6U6 928 aa17.15■□□□□ 0.34
MKS1-210ENST00000581180 AGO4Q9HCK5 861 aaKnown RBP17.15■□□□□ 0.34
MKS1-210ENST00000581180 OGDHLQ9ULD0 1010 aa17.15■□□□□ 0.34
MKS1-210ENST00000581180 CTAGE5O15320 804 aa17.14■□□□□ 0.33
MKS1-210ENST00000581180 SLC37A4O43826 429 aa17.14■□□□□ 0.33
MKS1-210ENST00000581180 CCNT1O60563 726 aaKnown RBP17.14■□□□□ 0.33
MKS1-210ENST00000581180 DDIT3P35638 169 aa17.14■□□□□ 0.33
MKS1-210ENST00000581180 GJA8P48165 433 aa17.14■□□□□ 0.33
MKS1-210ENST00000581180 ARHGAP1Q07960 439 aa17.14■□□□□ 0.33
MKS1-210ENST00000581180 PKP1Q13835 747 aa17.14■□□□□ 0.33
MKS1-210ENST00000581180 CELF3Q5SZQ8 465 aaKnown RBP17.14■□□□□ 0.33
MKS1-210ENST00000581180 BRAPQ7Z569 592 aa17.14■□□□□ 0.33
MKS1-210ENST00000581180 TLK2Q86UE8 772 aa17.14■□□□□ 0.33
MKS1-210ENST00000581180 FERMT3Q86UX7 667 aa17.14■□□□□ 0.33
MKS1-210ENST00000581180 U2AF1L4Q8WU68 220 aaKnown RBP17.14■□□□□ 0.33
MKS1-210ENST00000581180 EMID1Q96A84 441 aaPredicted RBP17.14■□□□□ 0.33
MKS1-210ENST00000581180 TMEM106CQ9BVX2 250 aa17.14■□□□□ 0.33
MKS1-210ENST00000581180 XPNPEP3Q9NQH7 507 aa17.14■□□□□ 0.33
MKS1-210ENST00000581180 DDX25Q9UHL0 483 aaKnown RBP17.14■□□□□ 0.33
MKS1-210ENST00000581180 SYNRGQ9UMZ2 1314 aa17.14■□□□□ 0.33
MKS1-210ENST00000581180 MSH4O15457 936 aa17.13■□□□□ 0.33
MKS1-210ENST00000581180 DHX15O43143 795 aaKnown RBP17.13■□□□□ 0.33
MKS1-210ENST00000581180 DYNC1LI2O43237 492 aaPredicted RBP17.13■□□□□ 0.33
MKS1-210ENST00000581180 GGPS1O95749 300 aa17.13■□□□□ 0.33
MKS1-210ENST00000581180 GH1P01241 217 aa17.13■□□□□ 0.33
MKS1-210ENST00000581180 IRX5P78411 483 aaPredicted RBP17.13■□□□□ 0.33
MKS1-210ENST00000581180 ITGB3BPQ13352 177 aaPredicted RBP17.13■□□□□ 0.33
MKS1-210ENST00000581180 NEDD9Q14511 834 aa17.13■□□□□ 0.33
MKS1-210ENST00000581180 MYSM1Q5VVJ2 828 aa17.13■□□□□ 0.33
MKS1-210ENST00000581180 KLHDC9Q8NEP7 349 aa17.13■□□□□ 0.33
MKS1-210ENST00000581180 OR6J1Q8NGC5 347 aa17.13■□□□□ 0.33
MKS1-210ENST00000581180 NOL7Q9UMY1 257 aaKnown RBP17.13■□□□□ 0.33
MKS1-210ENST00000581180 NFASCO94856 1347 aa17.13■□□□□ 0.33
MKS1-210ENST00000581180 SCN10AQ9Y5Y9 1956 aa17.12■□□□□ 0.33
MKS1-210ENST00000581180 MYADML2A6NDP7 307 aa17.12■□□□□ 0.33
MKS1-210ENST00000581180 FARP2O94887 1054 aaPredicted RBP17.12■□□□□ 0.33
MKS1-210ENST00000581180 PGK1P00558 417 aa17.12■□□□□ 0.33
MKS1-210ENST00000581180 ZSCAN22P10073 491 aaPredicted RBP17.12■□□□□ 0.33
MKS1-210ENST00000581180 ATP2B1P20020 1258 aa17.12■□□□□ 0.33
MKS1-210ENST00000581180 CST5P28325 142 aaPredicted RBP17.12■□□□□ 0.33
MKS1-210ENST00000581180 ORC2Q13416 577 aaPredicted RBP17.12■□□□□ 0.33
MKS1-210ENST00000581180 RILPL1Q5EBL4 403 aa17.12■□□□□ 0.33
MKS1-210ENST00000581180 TTC38Q5R3I4 469 aa17.12■□□□□ 0.33
MKS1-210ENST00000581180 METTL7BQ6UX53 244 aa17.12■□□□□ 0.33
MKS1-210ENST00000581180 POTEDQ86YR6 584 aa17.12■□□□□ 0.33
MKS1-210ENST00000581180 GIMAP8Q8ND71 665 aaPredicted RBP17.12■□□□□ 0.33
MKS1-210ENST00000581180 ETNPPLQ8TBG4 499 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms