RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 ZNF286BP0CG31 522 aa11.96□□□□□ -0.49
GGA3-210ENST00000580799 TGFB3P10600 412 aa11.96□□□□□ -0.49
GGA3-210ENST00000580799 DEFB103AP81534 67 aa11.96□□□□□ -0.49
GGA3-210ENST00000580799 NUCB1Q02818 461 aa11.96□□□□□ -0.49
GGA3-210ENST00000580799 IFIT1BQ5T764 474 aaKnown RBP11.96□□□□□ -0.49
GGA3-210ENST00000580799 MYSM1Q5VVJ2 828 aa11.96□□□□□ -0.49
GGA3-210ENST00000580799 TGS1Q96RS0 853 aaKnown RBP11.96□□□□□ -0.49
GGA3-210ENST00000580799 PDCD2LQ9BRP1 358 aa11.96□□□□□ -0.49
GGA3-210ENST00000580799 ALG1Q9BT22 464 aa11.96□□□□□ -0.49
GGA3-210ENST00000580799 VAT1LQ9HCJ6 419 aa11.96□□□□□ -0.49
GGA3-210ENST00000580799 MYH7BA7E2Y1 1941 aa11.96□□□□□ -0.5
GGA3-210ENST00000580799 OPLAHO14841 1288 aa11.95□□□□□ -0.5
GGA3-210ENST00000580799 ZBTB5O15062 677 aa11.95□□□□□ -0.5
GGA3-210ENST00000580799 PLA2G5P39877 138 aa11.95□□□□□ -0.5
GGA3-210ENST00000580799 ERVK-21P61565 698 aa11.95□□□□□ -0.5
GGA3-210ENST00000580799 TRIM71Q2Q1W2 868 aaKnown RBP11.95□□□□□ -0.5
GGA3-210ENST00000580799 CELF3Q5SZQ8 465 aaKnown RBP11.95□□□□□ -0.5
GGA3-210ENST00000580799 ZNF618Q5T7W0 954 aa11.95□□□□□ -0.5
GGA3-210ENST00000580799 B4GALNT3Q6L9W6 998 aa11.95□□□□□ -0.5
GGA3-210ENST00000580799 SPRED2Q7Z698 418 aa11.95□□□□□ -0.5
GGA3-210ENST00000580799 VSIG10LQ86VR7 867 aa11.95□□□□□ -0.5
GGA3-210ENST00000580799 MTMR8Q96EF0 704 aa11.95□□□□□ -0.5
GGA3-210ENST00000580799 SPATA33Q96N06 139 aa11.95□□□□□ -0.5
GGA3-210ENST00000580799 ARIH1Q9Y4X5 557 aaPredicted RBP11.95□□□□□ -0.5
GGA3-210ENST00000580799 PCDHA1Q9Y5I3 950 aa11.95□□□□□ -0.5
GGA3-210ENST00000580799 LINC01553A4QN01 128 aa11.94□□□□□ -0.5
GGA3-210ENST00000580799 LGR5O75473 907 aa11.94□□□□□ -0.5
GGA3-210ENST00000580799 RGS20O76081 388 aa11.94□□□□□ -0.5
GGA3-210ENST00000580799 GGPS1O95749 300 aa11.94□□□□□ -0.5
GGA3-210ENST00000580799 MYCLP12524 364 aaPredicted RBP11.94□□□□□ -0.5
GGA3-210ENST00000580799 CCND2P30279 289 aa11.94□□□□□ -0.5
GGA3-210ENST00000580799 PGM5Q15124 567 aa11.94□□□□□ -0.5
GGA3-210ENST00000580799 HSDL1Q3SXM5 330 aa11.94□□□□□ -0.5
GGA3-210ENST00000580799 TRAF7Q6Q0C0 670 aa11.94□□□□□ -0.5
GGA3-210ENST00000580799 TMCO2Q7Z6W1 182 aaPredicted RBP11.94□□□□□ -0.5
GGA3-210ENST00000580799 SERINC5Q86VE9 423 aa11.94□□□□□ -0.5
GGA3-210ENST00000580799 STAG2Q8N3U4 1231 aa11.94□□□□□ -0.5
GGA3-210ENST00000580799 GDPD5Q8WTR4 605 aa11.94□□□□□ -0.5
GGA3-210ENST00000580799 SUGCTQ9HAC7 445 aa11.94□□□□□ -0.5
GGA3-210ENST00000580799 INSL6Q9Y581 213 aa11.94□□□□□ -0.5
GGA3-210ENST00000580799 PALM3A6NDB9 673 aaPredicted RBP11.93□□□□□ -0.5
GGA3-210ENST00000580799 RSPH10B2B2RC85 870 aa11.93□□□□□ -0.5
GGA3-210ENST00000580799 PPP1R11O60927 126 aaPredicted RBP11.93□□□□□ -0.5
GGA3-210ENST00000580799 CAND2O75155 1236 aa11.93□□□□□ -0.5
GGA3-210ENST00000580799 AMHP03971 560 aa11.93□□□□□ -0.5
GGA3-210ENST00000580799 RSPH10BP0C881 870 aa11.93□□□□□ -0.5
GGA3-210ENST00000580799 UBA1P22314 1058 aaKnown RBP11.93□□□□□ -0.5
GGA3-210ENST00000580799 MBTPS1Q14703 1052 aa11.93□□□□□ -0.5
GGA3-210ENST00000580799 SEC23AQ15436 765 aa11.93□□□□□ -0.5
GGA3-210ENST00000580799 TCTN1Q2MV58 587 aa11.93□□□□□ -0.5
GGA3-210ENST00000580799 WNT8BQ93098 351 aa11.93□□□□□ -0.5
GGA3-210ENST00000580799 FAM122AQ96E09 287 aa11.93□□□□□ -0.5
GGA3-210ENST00000580799 C16orf70Q9BSU1 422 aa11.93□□□□□ -0.5
GGA3-210ENST00000580799 RAPGEFL1Q9UHV5 662 aa11.93□□□□□ -0.5
GGA3-210ENST00000580799 MAD2L2Q9UI95 211 aa11.93□□□□□ -0.5
GGA3-210ENST00000580799 MTUS1Q9ULD2 1270 aa11.93□□□□□ -0.5
GGA3-210ENST00000580799 COL4A6Q14031 1691 aa11.93□□□□□ -0.5
GGA3-210ENST00000580799 H3BRB1 525 aa11.92□□□□□ -0.5
GGA3-210ENST00000580799 GCOM1H8Y6P7 765 aaPredicted RBP11.92□□□□□ -0.5
GGA3-210ENST00000580799 STAM2O75886 525 aa11.92□□□□□ -0.5
GGA3-210ENST00000580799 POLR2MP0CAP2 368 aa11.92□□□□□ -0.5
GGA3-210ENST00000580799 HOXA13P31271 388 aaPredicted RBP11.92□□□□□ -0.5
GGA3-210ENST00000580799 HOXC8P31273 242 aa11.92□□□□□ -0.5
GGA3-210ENST00000580799 THPOP40225 353 aa11.92□□□□□ -0.5
GGA3-210ENST00000580799 HTRA4P83105 476 aaPredicted RBP11.92□□□□□ -0.5
GGA3-210ENST00000580799 ZNF200P98182 395 aaPredicted RBP11.92□□□□□ -0.5
GGA3-210ENST00000580799 TRDNQ13061 729 aa11.92□□□□□ -0.5
GGA3-210ENST00000580799 MKRN4PQ13434 485 aaPredicted RBP11.92□□□□□ -0.5
GGA3-210ENST00000580799 GNPTABQ3T906 1256 aa11.92□□□□□ -0.5
GGA3-210ENST00000580799 PLEKHG4Q58EX7 1191 aa11.92□□□□□ -0.5
GGA3-210ENST00000580799 SAMD11Q96NU1 681 aa11.92□□□□□ -0.5
GGA3-210ENST00000580799 USP26Q9BXU7 913 aa11.92□□□□□ -0.5
GGA3-210ENST00000580799 TUT1Q9H6E5 874 aaKnown RBP11.92□□□□□ -0.5
GGA3-210ENST00000580799 RIOX1Q9H6W3 641 aa11.92□□□□□ -0.5
GGA3-210ENST00000580799 UBE2ZQ9H832 354 aaPredicted RBP11.92□□□□□ -0.5
GGA3-210ENST00000580799 MLXIPQ9HAP2 919 aa11.92□□□□□ -0.5
GGA3-210ENST00000580799 MICAL3Q7RTP6 2002 aa11.92□□□□□ -0.5
GGA3-210ENST00000580799 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.91□□□□□ -0.5
GGA3-210ENST00000580799 ERICH2A1L162 156 aa11.91□□□□□ -0.5
GGA3-210ENST00000580799 C17orf102A2RUQ5 167 aa11.91□□□□□ -0.5
GGA3-210ENST00000580799 GNAT1P11488 350 aa11.91□□□□□ -0.5
GGA3-210ENST00000580799 SP2Q02086 613 aa11.91□□□□□ -0.5
GGA3-210ENST00000580799 HIC1Q14526 733 aa11.91□□□□□ -0.5
GGA3-210ENST00000580799 GRM4Q14833 912 aa11.91□□□□□ -0.5
GGA3-210ENST00000580799 TMEM31Q5JXX7 168 aa11.91□□□□□ -0.5
GGA3-210ENST00000580799 FAM117BQ6P1L5 589 aa11.91□□□□□ -0.5
GGA3-210ENST00000580799 HOMER1Q86YM7 354 aa11.91□□□□□ -0.5
GGA3-210ENST00000580799 FBXO22Q8NEZ5 403 aa11.91□□□□□ -0.5
GGA3-210ENST00000580799 DBF4BQ8NFT6 615 aa11.91□□□□□ -0.5
GGA3-210ENST00000580799 IL31RAQ8NI17 732 aa11.91□□□□□ -0.5
GGA3-210ENST00000580799 SP7Q8TDD2 431 aaPredicted RBP11.91□□□□□ -0.5
GGA3-210ENST00000580799 ATP6V0A1Q93050 837 aa11.91□□□□□ -0.5
GGA3-210ENST00000580799 LRFN3Q9BTN0 628 aa11.91□□□□□ -0.5
GGA3-210ENST00000580799 HCN4Q9Y3Q4 1203 aa11.91□□□□□ -0.5
GGA3-210ENST00000580799 FRMPD4Q14CM0 1322 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 PNMA6FA0A0J9YX94 578 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 NOP56O00567 594 aaKnown RBP11.9□□□□□ -0.5
GGA3-210ENST00000580799 IGHDP01880 384 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 LGALS2P05162 132 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 SMIM10L2AP0DMW4 78 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms