RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 GPKOWQ92917 476 aaPredicted RBP eCLIP10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CUL5Q93034 780 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 EMID1Q96A84 441 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SLC9A7Q96T83 725 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 ESYT1Q9BSJ8 1104 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 LSG1Q9H089 658 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CERS4Q9HA82 394 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 PCDHA11Q9Y5I1 949 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SCN10AQ9Y5Y9 1956 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 A0A0C4DFX4 3053 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 NOP56O00567 594 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SH2B2O14492 632 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SLC27A2O14975 620 aa10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 PLEKHA8P1O95397 391 aa10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 F2P00734 622 aa10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CA3P07451 260 aa10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CKBP12277 381 aa10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SELPP16109 830 aa10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 ZNF200P98182 395 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SP2Q02086 613 aa10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SP4Q02446 784 aa10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 ADGRE1Q14246 886 aa10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SKAP1Q86WV1 359 aa10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CCDC82Q8N4S0 544 aa10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 DHX38Q92620 1227 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 LRRC2Q9BYS8 371 aa10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 PRDM6Q9NQX0 595 aa10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 TANC1Q9C0D5 1861 aa10.63□□□□□ -0.71
CDK5RAP3-211ENST00000578996 KIAA1217Q5T5P2 1943 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SCN5AQ14524 2016 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 GBF1Q92538 1859 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 hCG_1642624A0A1W2PR95 340 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 KIF28PB7ZC32 967 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 RBAK-RBAKDNI3L0D1 243 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 PPFIA4O75335 1185 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 TGFB3P10600 412 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 GNAQP50148 359 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 PTK7Q13308 1070 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CREB3L3Q68CJ9 461 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 USP17L6PQ6QN14 398 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CYFIP1Q7L576 1253 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 TMCO2Q7Z6W1 182 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 TMEM87BQ96K49 555 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CTAGE1Q96RT6 745 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 MAP3K14Q99558 947 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SPZ1Q9BXG8 430 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SLC12A7Q9Y666 1083 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 VCANP13611 3396 aa10.62□□□□□ -0.71
CDK5RAP3-211ENST00000578996 C17orf102A2RUQ5 167 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 HAS3O00219 553 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 RFXAPO00287 272 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 FIBPO43427 364 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 TLL1O43897 1013 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 STAM2O75886 525 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 BAIAP3O94812 1187 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 LGALS2P05162 132 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CALM1P0DP23 149 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CALM2P0DP24 149 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CALM3P0DP25 149 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 MRPS9P82933 396 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 COL9A3Q14050 684 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 NEDD9Q14511 834 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SKIV2LQ15477 1246 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 ZNF618Q5T7W0 954 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CNKSR3Q6P9H4 555 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SYNE3Q6ZMZ3 975 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 MICU3Q86XE3 530 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 HERC6Q8IVU3 1022 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 TMTC2Q8N394 836 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SRBD1Q8N5C6 995 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 PHOSPHO2Q8TCD6 241 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 ARNTL2Q8WYA1 636 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SYMPKQ92797 1274 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 WNT8BQ93098 351 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 LZTS2Q9BRK4 669 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 ZBED2Q9BTP6 218 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 BCAS3Q9H6U6 928 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 THEGQ9P2T0 379 aa10.61□□□□□ -0.71
CDK5RAP3-211ENST00000578996 H3BRB1 525 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 MEIS2O14770 477 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 NBNO60934 754 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 PARNO95453 639 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 HOXD8P13378 290 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 THPOP40225 353 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 WDR5P61964 334 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 DEFB103AP81534 67 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 HIC1Q14526 733 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 NECTIN1Q15223 517 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 UBE2SQ16763 222 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 TJAP1Q5JTD0 557 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 UTP14CQ5TAP6 766 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 RNF20Q5VTR2 975 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 PCNX4Q63HM2 1172 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 FAM117BQ6P1L5 589 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 METTL7BQ6UX53 244 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CENPQQ7L2Z9 268 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 HEATR3Q7Z4Q2 680 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 NLRX1Q86UT6 975 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 TRIM50Q86XT4 487 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 IL27Q8NEV9 243 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms