RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 NKX3-2P78367 333 aa15.73■□□□□ 0.11
LINC01543-201ENST00000578367 TNFAIP2Q03169 654 aa15.73■□□□□ 0.11
LINC01543-201ENST00000578367 CCDC144BQ3MJ40 725 aa15.73■□□□□ 0.11
LINC01543-201ENST00000578367 TTC38Q5R3I4 469 aa15.73■□□□□ 0.11
LINC01543-201ENST00000578367 RIT2Q99578 217 aa15.73■□□□□ 0.11
LINC01543-201ENST00000578367 RTEL1Q9NZ71 1219 aa15.73■□□□□ 0.11
LINC01543-201ENST00000578367 DDX41Q9UJV9 622 aaKnown RBP15.73■□□□□ 0.11
LINC01543-201ENST00000578367 CEP131Q9UPN4 1083 aa15.73■□□□□ 0.11
LINC01543-201ENST00000578367 DOCK3Q8IZD9 2030 aa15.73■□□□□ 0.11
LINC01543-201ENST00000578367 NEMFO60524 1076 aa15.72■□□□□ 0.11
LINC01543-201ENST00000578367 BAG4O95429 457 aaKnown RBP15.72■□□□□ 0.11
LINC01543-201ENST00000578367 TXNP10599 105 aaKnown RBP15.72■□□□□ 0.11
LINC01543-201ENST00000578367 LAMC2Q13753 1193 aa15.72■□□□□ 0.11
LINC01543-201ENST00000578367 PRR16Q569H4 304 aa15.72■□□□□ 0.11
LINC01543-201ENST00000578367 SEPT14Q6ZU15 432 aa15.72■□□□□ 0.11
LINC01543-201ENST00000578367 EEPD1Q7L9B9 569 aa15.72■□□□□ 0.11
LINC01543-201ENST00000578367 SH3TC2Q8TF17 1288 aa15.72■□□□□ 0.11
LINC01543-201ENST00000578367 LENG9Q96B70 501 aa15.72■□□□□ 0.11
LINC01543-201ENST00000578367 ZNF396Q96N95 335 aaPredicted RBP15.72■□□□□ 0.11
LINC01543-201ENST00000578367 AGO4Q9HCK5 861 aaKnown RBP15.72■□□□□ 0.11
LINC01543-201ENST00000578367 KCNMB3Q9NPA1 279 aa15.72■□□□□ 0.11
LINC01543-201ENST00000578367 PAK6Q9NQU5 681 aaPredicted RBP15.72■□□□□ 0.11
LINC01543-201ENST00000578367 CHMP5Q9NZZ3 219 aa15.72■□□□□ 0.11
LINC01543-201ENST00000578367 DDX20Q9UHI6 824 aaKnown RBP15.72■□□□□ 0.11
LINC01543-201ENST00000578367 ZSWIM8A7E2V4 1837 aa15.71■□□□□ 0.11
LINC01543-201ENST00000578367 ZNFX1Q9P2E3 1918 aaKnown RBP15.71■□□□□ 0.11
LINC01543-201ENST00000578367 FAM205CA6NFA0 338 aa15.71■□□□□ 0.11
LINC01543-201ENST00000578367 IPO5O00410 1097 aaKnown RBP15.71■□□□□ 0.11
LINC01543-201ENST00000578367 GH1P01241 217 aa15.71■□□□□ 0.11
LINC01543-201ENST00000578367 RARBP10826 455 aa15.71■□□□□ 0.11
LINC01543-201ENST00000578367 TOB1P50616 345 aaPredicted RBP15.71■□□□□ 0.11
LINC01543-201ENST00000578367 TRIM32Q13049 653 aa15.71■□□□□ 0.11
LINC01543-201ENST00000578367 METTL7BQ6UX53 244 aa15.71■□□□□ 0.11
LINC01543-201ENST00000578367 FERMT3Q86UX7 667 aa15.71■□□□□ 0.11
LINC01543-201ENST00000578367 TRPV1Q8NER1 839 aa15.71■□□□□ 0.11
LINC01543-201ENST00000578367 SDF4Q9BRK5 362 aa15.71■□□□□ 0.11
LINC01543-201ENST00000578367 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.71■□□□□ 0.11
LINC01543-201ENST00000578367 SPC25Q9HBM1 224 aa15.71■□□□□ 0.11
LINC01543-201ENST00000578367 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.71■□□□□ 0.11
LINC01543-201ENST00000578367 GNEQ9Y223 722 aaKnown RBP15.71■□□□□ 0.11
LINC01543-201ENST00000578367 TDP2O95551 362 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 KCNA2P16389 499 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 SMPD1P17405 629 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 PRPHP41219 470 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 ADCYAP1R1P41586 468 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 SEMA3FQ13275 785 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 BRDTQ58F21 947 aaPredicted RBP15.7■□□□□ 0.1
LINC01543-201ENST00000578367 PRAMEF19Q5SWL8 479 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 CELF3Q5SZQ8 465 aaKnown RBP15.7■□□□□ 0.1
LINC01543-201ENST00000578367 ARL6IP4Q66PJ3 421 aaKnown RBP15.7■□□□□ 0.1
LINC01543-201ENST00000578367 CYP2W1Q8TAV3 490 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 ETNPPLQ8TBG4 499 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 SLC5A5Q92911 643 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 MTMR9Q96QG7 549 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 ZNF577Q9BSK1 485 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 AP5M1Q9H0R1 490 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 UPF3AQ9H1J1 476 aaKnown RBP15.7■□□□□ 0.1
LINC01543-201ENST00000578367 PDGFCQ9NRA1 345 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 POLR3EQ9NVU0 708 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 TCEAL9Q9UHQ7 104 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 CFAP45Q9UL16 551 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 LCTP09848 1927 aa15.7■□□□□ 0.1
LINC01543-201ENST00000578367 MSH4O15457 936 aa15.69■□□□□ 0.1
LINC01543-201ENST00000578367 GJB1P08034 283 aa15.69■□□□□ 0.1
LINC01543-201ENST00000578367 ARP10275 920 aa15.69■□□□□ 0.1
LINC01543-201ENST00000578367 CCL5P13501 91 aa15.69■□□□□ 0.1
LINC01543-201ENST00000578367 UBA1P22314 1058 aaKnown RBP15.69■□□□□ 0.1
LINC01543-201ENST00000578367 CNGA1P29973 690 aa15.69■□□□□ 0.1
LINC01543-201ENST00000578367 CCND3P30281 292 aaPredicted RBP15.69■□□□□ 0.1
LINC01543-201ENST00000578367 GJA9P57773 515 aa15.69■□□□□ 0.1
LINC01543-201ENST00000578367 KRT76Q01546 638 aa15.69■□□□□ 0.1
LINC01543-201ENST00000578367 CALCRLQ16602 461 aa15.69■□□□□ 0.1
LINC01543-201ENST00000578367 DHX37Q8IY37 1157 aaKnown RBP15.69■□□□□ 0.1
LINC01543-201ENST00000578367 RDM1Q8NG50 284 aa15.69■□□□□ 0.1
LINC01543-201ENST00000578367 ZDHHC9Q9Y397 364 aa15.69■□□□□ 0.1
LINC01543-201ENST00000578367 STK24Q9Y6E0 443 aa15.69■□□□□ 0.1
LINC01543-201ENST00000578367 PLXNA1Q9UIW2 1896 aa15.69■□□□□ 0.1
LINC01543-201ENST00000578367 A6NJR5 290 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 SLC37A4O43826 429 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 ZEB2O60315 1214 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 MARCH6O60337 910 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 KPNA6O60684 536 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 PSMD10O75832 226 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 CST5P28325 142 aaPredicted RBP15.68■□□□□ 0.1
LINC01543-201ENST00000578367 MCM7P33993 719 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 NASPP49321 788 aaPredicted RBP15.68■□□□□ 0.1
LINC01543-201ENST00000578367 CPT1AP50416 773 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 PKP1Q13835 747 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 LY6KQ17RY6 165 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 ANO1Q5XXA6 986 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 LHX8Q68G74 356 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 ZNF746Q6NUN9 644 aaPredicted RBP15.68■□□□□ 0.1
LINC01543-201ENST00000578367 SMAP1Q8IYB5 467 aaPredicted RBP15.68■□□□□ 0.1
LINC01543-201ENST00000578367 ARRDC4Q8NCT1 418 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 PPTC7Q8NI37 304 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 RNF208Q9H0X6 261 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 UNC93B1Q9H1C4 597 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 MLXIPQ9HAP2 919 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 PCDHB6Q9Y5E3 794 aa15.68■□□□□ 0.1
LINC01543-201ENST00000578367 DDX49Q9Y6V7 483 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms