RNA–Protein interactions for RNA: ENST00000577134.1

SPOP-222, Transcript of speckle type BTB/POZ protein, human

TSL 2

Gene SPOP, Length 421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOP-222	ENST00000577134	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	RBM47	A0AV96	593 aa	Known RBP	11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	SPATA31C2	B4DYI2	1134 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	MSH4	O15457	936 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	ATP9A	O75110	1047 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	ARIH2	O95376	493 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	GCFC2	P16383	781 aa	Known RBP	11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	CCND3	P30281	292 aa	Predicted RBP	11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	ICAM3	P32942	547 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	ADCYAP1R1	P41586	468 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	SP2	Q02086	613 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	CEBPZ	Q03701	1054 aa	Known RBP	11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	DNM1	Q05193	864 aa	Known RBP	11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	SF3A1	Q15459	793 aa	Known RBP	11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	PKN2	Q16513	984 aa	Known RBP	11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	LY6K	Q17RY6	165 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	CCDC144B	Q3MJ40	725 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	GNPTAB	Q3T906	1256 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	NIPA1	Q7RTP0	329 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	POTED	Q86YR6	584 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	GJA10	Q969M2	543 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	USP28	Q96RU2	1077 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	TMEM60	Q9H2L4	133 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	AGO4	Q9HCK5	861 aa	Known RBP	11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	KCNH7	Q9NS40	1196 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	TFIP11	Q9UBB9	837 aa	Known RBP	11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	NRBP1	Q9UHY1	535 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	DDX41	Q9UJV9	622 aa	Known RBP	11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	MRVI1	Q9Y6F6	885 aa		11.28	□□□□□ -0.6
SPOP-222	ENST00000577134	MAFG	O15525	162 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	ADCY6	O43306	1168 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	FIBP	O43427	364 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	SORBS3	O60504	671 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	NEMF	O60524	1076 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	TXN	P10599	105 aa	Known RBP	11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	SMPD1	P17405	629 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	PTGS1	P23219	599 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	CNGA1	P29973	690 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	SET	Q01105	290 aa	Predicted RBP	11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	TTLL4	Q14679	1199 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	SLC9C1	Q4G0N8	1177 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	MAP3K21	Q5TCX8	1036 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	ANO1	Q5XXA6	986 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	IQSEC1	Q6DN90	963 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	KCNV1	Q6PIU1	500 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	C4orf32	Q8N8J7	132 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	SCFD2	Q8WU76	684 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	HAS1	Q92839	578 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	COPS5	Q92905	334 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	ZNF396	Q96N95	335 aa	Predicted RBP	11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	ZNF577	Q9BSK1	485 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	BCAS3	Q9H6U6	928 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	FAM184B	Q9ULE4	1060 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	ATP6V1D	Q9Y5K8	247 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	PCNT	O95613	3336 aa		11.27	□□□□□ -0.61
SPOP-222	ENST00000577134	MYC	P01106	439 aa	Predicted RBP	11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	AKR1A1	P14550	325 aa		11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	KCNA2	P16389	499 aa		11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	UBA1	P22314	1058 aa	Known RBP	11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	TNFAIP2	Q03169	654 aa		11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	PTGDR	Q13258	359 aa		11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	ITGB3BP	Q13352	177 aa	Predicted RBP	11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	ORC2	Q13416	577 aa	Predicted RBP	11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	CALCRL	Q16602	461 aa		11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	DUSP28	Q4G0W2	176 aa		11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	GJC2	Q5T442	439 aa	Predicted RBP	11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	CCDC62	Q6P9F0	684 aa		11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	ETNPPL	Q8TBG4	499 aa		11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	SLC5A5	Q92911	643 aa		11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	TNPO1	Q92973	898 aa	Known RBP	11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	LENG1	Q96BZ8	264 aa	Predicted RBP	11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	CDHR1	Q96JP9	859 aa		11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	MTMR9	Q96QG7	549 aa		11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	MCOLN1	Q9GZU1	580 aa		11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	KCNMB3	Q9NPA1	279 aa		11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	TCHH	Q07283	1943 aa		11.26	□□□□□ -0.61
SPOP-222	ENST00000577134	DDX39A	O00148	427 aa	Known RBP	11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	IPO5	O00410	1097 aa	Known RBP	11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	TBX3	O15119	743 aa		11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	SEPT4	O43236	478 aa		11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	MARCH6	O60337	910 aa		11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	BAG4	O95429	457 aa	Known RBP	11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	GGPS1	O95749	300 aa		11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	OR52Z1	P0C646	297 aa		11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	TGFB3	P10600	412 aa		11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	NCL	P19338	710 aa	Known RBP	11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	TXK	P42681	527 aa		11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	PTPA	Q15257	358 aa		11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	MTFR1	Q15390	333 aa		11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	CYFIP1	Q7L576	1253 aa		11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	UNC93B1	Q9H1C4	597 aa		11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	HMX1	Q9NP08	348 aa	Predicted RBP	11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	POLR3E	Q9NVU0	708 aa		11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	GNE	Q9Y223	722 aa	Known RBP	11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	TELO2	Q9Y4R8	837 aa		11.25	□□□□□ -0.61
SPOP-222	ENST00000577134	POTEF	A5A3E0	1075 aa		11.24	□□□□□ -0.61
SPOP-222	ENST00000577134	DHX15	O43143	795 aa	Known RBP	11.24	□□□□□ -0.61
SPOP-222	ENST00000577134	CCL5	P13501	91 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms