RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 FAM86B1E9PN63 330 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 MEIS1O00470 390 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 ADCY6O43306 1168 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 STX6O43752 255 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 ARIH2O95376 493 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 FAM86B2P0C5J1 330 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 LY6KQ17RY6 165 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 PRR16Q569H4 304 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 LHX8Q68G74 356 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 CCDC62Q6P9F0 684 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 TLK2Q86UE8 772 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 PLA2G4DQ86XP0 818 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 CYP2W1Q8TAV3 490 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 U2AF1L4Q8WU68 220 aaKnown RBP15.89■□□□□ 0.13
RPAIN-217ENST00000575711 LENG1Q96BZ8 264 aaPredicted RBP15.89■□□□□ 0.13
RPAIN-217ENST00000575711 SPC25Q9HBM1 224 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 XPNPEP3Q9NQH7 507 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 DAXXQ9UER7 740 aaPredicted RBP15.89■□□□□ 0.13
RPAIN-217ENST00000575711 DDX41Q9UJV9 622 aaKnown RBP15.89■□□□□ 0.13
RPAIN-217ENST00000575711 NOL7Q9UMY1 257 aaKnown RBP15.89■□□□□ 0.13
RPAIN-217ENST00000575711 GNEQ9Y223 722 aaKnown RBP15.89■□□□□ 0.13
RPAIN-217ENST00000575711 Q9Y3F1 56 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 CENPFP49454 3210 aa15.89■□□□□ 0.13
RPAIN-217ENST00000575711 IGLV3-22A0A075B6J6 115 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 CYP3A7-CYP3A51PA0A087WV96 503 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 EDIL3O43854 480 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 CCNT1O60563 726 aaKnown RBP15.88■□□□□ 0.13
RPAIN-217ENST00000575711 SGPL1O95470 568 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 TDP2O95551 362 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 GH1P01241 217 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 GCFC2P16383 781 aaKnown RBP15.88■□□□□ 0.13
RPAIN-217ENST00000575711 CAPN2P17655 700 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 CYP3A7P24462 503 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 GJA8P48165 433 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 SEMA3FQ13275 785 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 NEDD9Q14511 834 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 TMEM63BQ5T3F8 832 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 PPP4R3AQ6IN85 833 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 OR6J1Q8NGC5 347 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 AP5M1Q9H0R1 490 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 TSHZ2Q9NRE2 1034 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 KCNH7Q9NS40 1196 aa15.88■□□□□ 0.13
RPAIN-217ENST00000575711 DDX25Q9UHL0 483 aaKnown RBP15.88■□□□□ 0.13
RPAIN-217ENST00000575711 CCDC85CA6NKD9 419 aa15.87■□□□□ 0.13
RPAIN-217ENST00000575711 DYNC1LI2O43237 492 aaPredicted RBP15.87■□□□□ 0.13
RPAIN-217ENST00000575711 TFRCP02786 760 aaKnown RBP15.87■□□□□ 0.13
RPAIN-217ENST00000575711 ARP10275 920 aa15.87■□□□□ 0.13
RPAIN-217ENST00000575711 UBA1P22314 1058 aaKnown RBP15.87■□□□□ 0.13
RPAIN-217ENST00000575711 TRAPPC10P48553 1259 aa15.87■□□□□ 0.13
RPAIN-217ENST00000575711 Q4G0T1 1027 aa15.87■□□□□ 0.13
RPAIN-217ENST00000575711 GJC2Q5T442 439 aaPredicted RBP15.87■□□□□ 0.13
RPAIN-217ENST00000575711 DHX37Q8IY37 1157 aaKnown RBP15.87■□□□□ 0.13
RPAIN-217ENST00000575711 GIMAP8Q8ND71 665 aaPredicted RBP15.87■□□□□ 0.13
RPAIN-217ENST00000575711 COPS5Q92905 334 aa15.87■□□□□ 0.13
RPAIN-217ENST00000575711 SENP7Q9BQF6 1050 aa15.87■□□□□ 0.13
RPAIN-217ENST00000575711 CRISPLD2Q9H0B8 497 aa15.87■□□□□ 0.13
RPAIN-217ENST00000575711 AGO4Q9HCK5 861 aaKnown RBP15.87■□□□□ 0.13
RPAIN-217ENST00000575711 PKD2L1Q9P0L9 805 aa15.87■□□□□ 0.13
RPAIN-217ENST00000575711 MTMR6Q9Y217 621 aa15.87■□□□□ 0.13
RPAIN-217ENST00000575711 SYNRGQ9UMZ2 1314 aa15.87■□□□□ 0.13
RPAIN-217ENST00000575711 GGPS1O95749 300 aa15.86■□□□□ 0.13
RPAIN-217ENST00000575711 PGK1P00558 417 aa15.86■□□□□ 0.13
RPAIN-217ENST00000575711 MYCNP04198 464 aaPredicted RBP15.86■□□□□ 0.13
RPAIN-217ENST00000575711 C6orf222P0C671 652 aaPredicted RBP15.86■□□□□ 0.13
RPAIN-217ENST00000575711 ATP2B1P20020 1258 aa15.86■□□□□ 0.13
RPAIN-217ENST00000575711 PTGS1P23219 599 aa15.86■□□□□ 0.13
RPAIN-217ENST00000575711 GJA9P57773 515 aa15.86■□□□□ 0.13
RPAIN-217ENST00000575711 SP2Q02086 613 aa15.86■□□□□ 0.13
RPAIN-217ENST00000575711 LAMC2Q13753 1193 aa15.86■□□□□ 0.13
RPAIN-217ENST00000575711 CELF3Q5SZQ8 465 aaKnown RBP15.86■□□□□ 0.13
RPAIN-217ENST00000575711 BRAPQ7Z569 592 aa15.86■□□□□ 0.13
RPAIN-217ENST00000575711 RNF180Q86T96 592 aa15.86■□□□□ 0.13
RPAIN-217ENST00000575711 ARRDC4Q8NCT1 418 aa15.86■□□□□ 0.13
RPAIN-217ENST00000575711 MBOAT7Q96N66 472 aa15.86■□□□□ 0.13
RPAIN-217ENST00000575711 SDF4Q9BRK5 362 aa15.86■□□□□ 0.13
RPAIN-217ENST00000575711 ZNF577Q9BSK1 485 aa15.86■□□□□ 0.13
RPAIN-217ENST00000575711 UPF3AQ9H1J1 476 aaKnown RBP15.86■□□□□ 0.13
RPAIN-217ENST00000575711 MLXIPQ9HAP2 919 aa15.86■□□□□ 0.13
RPAIN-217ENST00000575711 OGDHLQ9ULD0 1010 aa15.86■□□□□ 0.13
RPAIN-217ENST00000575711 RBM19Q9Y4C8 960 aaKnown RBP15.86■□□□□ 0.13
RPAIN-217ENST00000575711 SORBS3O60504 671 aa15.85■□□□□ 0.13
RPAIN-217ENST00000575711 ATP9AO75110 1047 aa15.85■□□□□ 0.13
RPAIN-217ENST00000575711 ADAMTS4O75173 837 aa15.85■□□□□ 0.13
RPAIN-217ENST00000575711 KCNA2P16389 499 aa15.85■□□□□ 0.13
RPAIN-217ENST00000575711 CPT1AP50416 773 aa15.85■□□□□ 0.13
RPAIN-217ENST00000575711 ARHGAP1Q07960 439 aa15.85■□□□□ 0.13
RPAIN-217ENST00000575711 BRDTQ58F21 947 aaPredicted RBP15.85■□□□□ 0.13
RPAIN-217ENST00000575711 FERMT3Q86UX7 667 aa15.85■□□□□ 0.13
RPAIN-217ENST00000575711 EMID1Q96A84 441 aaPredicted RBP15.85■□□□□ 0.13
RPAIN-217ENST00000575711 LENG9Q96B70 501 aa15.85■□□□□ 0.13
RPAIN-217ENST00000575711 MYH7BA7E2Y1 1941 aa15.85■□□□□ 0.13
RPAIN-217ENST00000575711 KIAA1217Q5T5P2 1943 aa15.84■□□□□ 0.13
RPAIN-217ENST00000575711 POTEFA5A3E0 1075 aa15.84■□□□□ 0.13
RPAIN-217ENST00000575711 IPO5O00410 1097 aaKnown RBP15.84■□□□□ 0.13
RPAIN-217ENST00000575711 SLC37A4O43826 429 aa15.84■□□□□ 0.13
RPAIN-217ENST00000575711 ZEB2O60315 1214 aa15.84■□□□□ 0.13
RPAIN-217ENST00000575711 MARCH6O60337 910 aa15.84■□□□□ 0.13
RPAIN-217ENST00000575711 NEMFO60524 1076 aa15.84■□□□□ 0.13
RPAIN-217ENST00000575711 FARP2O94887 1054 aaPredicted RBP15.84■□□□□ 0.13
RPAIN-217ENST00000575711 NKX3-2P78367 333 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms