RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 ZNF576Q9H609 170 aa23.97■■□□□ 1.43
CHRNB1-204ENST00000572857 HDAC6Q9UBN7 1215 aa23.97■■□□□ 1.43
CHRNB1-204ENST00000572857 SCN10AQ9Y5Y9 1956 aa23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 PPFIA4O75335 1185 aa23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 IQCF3P0C7M6 154 aa23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 MFSD10Q14728 455 aa23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 GRIN2CQ14957 1233 aa23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 KIAA0753Q2KHM9 967 aa23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 ADCK5Q3MIX3 580 aa23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 GNPTABQ3T906 1256 aa23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 TMTC3Q6ZXV5 915 aa23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 DHX32Q7L7V1 743 aaKnown RBP23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 SESTD1Q86VW0 696 aa23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 SGMS1Q86VZ5 419 aa23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 KATNAL1Q9BW62 490 aa23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 BCAS3Q9H6U6 928 aa23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 PSTPIP2Q9H939 334 aa23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 SLC4A7Q9Y6M7 1214 aa23.96■■□□□ 1.43
CHRNB1-204ENST00000572857 PITPNM1O00562 1244 aa23.95■■□□□ 1.42
CHRNB1-204ENST00000572857 MEIS2O14770 477 aa23.95■■□□□ 1.42
CHRNB1-204ENST00000572857 EXOSC10Q01780 885 aaKnown RBP23.95■■□□□ 1.42
CHRNB1-204ENST00000572857 FTOQ9C0B1 505 aaKnown RBP eCLIP23.95■■□□□ 1.42
CHRNB1-204ENST00000572857 MSRAQ9UJ68 235 aa23.95■■□□□ 1.42
CHRNB1-204ENST00000572857 FRMPD4Q14CM0 1322 aa23.94■■□□□ 1.42
CHRNB1-204ENST00000572857 PIK3CDO00329 1044 aa23.94■■□□□ 1.42
CHRNB1-204ENST00000572857 F2P00734 622 aa23.94■■□□□ 1.42
CHRNB1-204ENST00000572857 PFKMP08237 780 aa23.94■■□□□ 1.42
CHRNB1-204ENST00000572857 FOSL2P15408 326 aa23.94■■□□□ 1.42
CHRNB1-204ENST00000572857 APOA5Q6Q788 366 aa23.94■■□□□ 1.42
CHRNB1-204ENST00000572857 INPP4AQ96PE3 977 aaPredicted RBP23.94■■□□□ 1.42
CHRNB1-204ENST00000572857 CTAGE1Q96RT6 745 aa23.94■■□□□ 1.42
CHRNB1-204ENST00000572857 GTF2IRD1Q9UHL9 959 aa23.94■■□□□ 1.42
CHRNB1-204ENST00000572857 BRPF3Q9ULD4 1205 aa23.94■■□□□ 1.42
CHRNB1-204ENST00000572857 SPATA31C2B4DYI2 1134 aa23.93■■□□□ 1.42
CHRNB1-204ENST00000572857 STAM2O75886 525 aa23.93■■□□□ 1.42
CHRNB1-204ENST00000572857 HOXD8P13378 290 aaPredicted RBP23.93■■□□□ 1.42
CHRNB1-204ENST00000572857 RFC2P35250 354 aa23.93■■□□□ 1.42
CHRNB1-204ENST00000572857 KRT32Q14532 448 aa23.93■■□□□ 1.42
CHRNB1-204ENST00000572857 TSGA10IPQ3SY00 556 aa23.93■■□□□ 1.42
CHRNB1-204ENST00000572857 HEATR3Q7Z4Q2 680 aa23.93■■□□□ 1.42
CHRNB1-204ENST00000572857 CCDC155Q8N6L0 562 aa23.93■■□□□ 1.42
CHRNB1-204ENST00000572857 MAFAQ8NHW3 353 aaPredicted RBP23.93■■□□□ 1.42
CHRNB1-204ENST00000572857 KIAA1217Q5T5P2 1943 aa23.92■■□□□ 1.42
CHRNB1-204ENST00000572857 HAS3O00219 553 aa23.92■■□□□ 1.42
CHRNB1-204ENST00000572857 NOP56O00567 594 aaKnown RBP23.92■■□□□ 1.42
CHRNB1-204ENST00000572857 ICAM3P32942 547 aa23.92■■□□□ 1.42
CHRNB1-204ENST00000572857 RABGGTBP53611 331 aa23.92■■□□□ 1.42
CHRNB1-204ENST00000572857 ZNF200P98182 395 aaPredicted RBP23.92■■□□□ 1.42
CHRNB1-204ENST00000572857 RAB30Q15771 203 aa23.92■■□□□ 1.42
CHRNB1-204ENST00000572857 PCNX4Q63HM2 1172 aa23.92■■□□□ 1.42
CHRNB1-204ENST00000572857 CYFIP1Q7L576 1253 aa23.92■■□□□ 1.42
CHRNB1-204ENST00000572857 CAGE1Q8TC20 777 aa23.92■■□□□ 1.42
CHRNB1-204ENST00000572857 NKX2-4Q9H2Z4 354 aa23.92■■□□□ 1.42
CHRNB1-204ENST00000572857 NAP1L2Q9ULW6 460 aaPredicted RBP23.92■■□□□ 1.42
CHRNB1-204ENST00000572857 ZBTB43O43298 467 aa23.91■■□□□ 1.42
CHRNB1-204ENST00000572857 FIBPO43427 364 aa23.91■■□□□ 1.42
CHRNB1-204ENST00000572857 ACTN1P12814 892 aa23.91■■□□□ 1.42
CHRNB1-204ENST00000572857 ATP2A2P16615 1042 aaKnown RBP23.91■■□□□ 1.42
CHRNB1-204ENST00000572857 FGD1P98174 961 aa23.91■■□□□ 1.42
CHRNB1-204ENST00000572857 SEMA3FQ13275 785 aa23.91■■□□□ 1.42
CHRNB1-204ENST00000572857 NEDD9Q14511 834 aa23.91■■□□□ 1.42
CHRNB1-204ENST00000572857 UBE2SQ16763 222 aa23.91■■□□□ 1.42
CHRNB1-204ENST00000572857 RTN1Q16799 776 aa23.91■■□□□ 1.42
CHRNB1-204ENST00000572857 XRRA1Q6P2D8 792 aa23.91■■□□□ 1.42
CHRNB1-204ENST00000572857 DHX38Q92620 1227 aaKnown RBP23.91■■□□□ 1.42
CHRNB1-204ENST00000572857 C16orf70Q9BSU1 422 aa23.91■■□□□ 1.42
CHRNB1-204ENST00000572857 RBM28Q9NW13 759 aaKnown RBP23.91■■□□□ 1.42
CHRNB1-204ENST00000572857 SP4Q02446 784 aa23.9■■□□□ 1.42
CHRNB1-204ENST00000572857 AFAP1L1Q8TED9 768 aa23.9■■□□□ 1.42
CHRNB1-204ENST00000572857 YBX2Q9Y2T7 364 aaKnown RBP23.9■■□□□ 1.42
CHRNB1-204ENST00000572857 KLF18A0A0U1RQI7 1052 aa23.89■■□□□ 1.41
CHRNB1-204ENST00000572857 HMGB1P09429 215 aaKnown RBP23.89■■□□□ 1.41
CHRNB1-204ENST00000572857 CPA1P15085 419 aa23.89■■□□□ 1.41
CHRNB1-204ENST00000572857 SELPP16109 830 aa23.89■■□□□ 1.41
CHRNB1-204ENST00000572857 METTL7BQ6UX53 244 aa23.89■■□□□ 1.41
CHRNB1-204ENST00000572857 LRRC8DQ7L1W4 858 aa23.89■■□□□ 1.41
CHRNB1-204ENST00000572857 NLRX1Q86UT6 975 aa23.89■■□□□ 1.41
CHRNB1-204ENST00000572857 SLC28A3Q9HAS3 691 aa23.89■■□□□ 1.41
CHRNB1-204ENST00000572857 V9GY48 417 aaPredicted RBP23.89■■□□□ 1.41
CHRNB1-204ENST00000572857 SPDYE3A6NKU9 549 aa23.88■■□□□ 1.41
CHRNB1-204ENST00000572857 GOLGA8AA7E2F4 631 aa23.88■■□□□ 1.41
CHRNB1-204ENST00000572857 GOLGA8BA8MQT2 603 aa23.88■■□□□ 1.41
CHRNB1-204ENST00000572857 H3BRB1 525 aa23.88■■□□□ 1.41
CHRNB1-204ENST00000572857 LGALS2P05162 132 aa23.88■■□□□ 1.41
CHRNB1-204ENST00000572857 CKBP12277 381 aa23.88■■□□□ 1.41
CHRNB1-204ENST00000572857 MYOGP15173 224 aa23.88■■□□□ 1.41
CHRNB1-204ENST00000572857 PTK7Q13308 1070 aa23.88■■□□□ 1.41
CHRNB1-204ENST00000572857 HIC1Q14526 733 aa23.88■■□□□ 1.41
CHRNB1-204ENST00000572857 WWC2Q6AWC2 1192 aa23.88■■□□□ 1.41
CHRNB1-204ENST00000572857 JAKMIP1Q96N16 626 aaKnown RBP23.88■■□□□ 1.41
CHRNB1-204ENST00000572857 PRDM12Q9H4Q4 367 aa23.88■■□□□ 1.41
CHRNB1-204ENST00000572857 TUT1Q9H6E5 874 aaKnown RBP23.88■■□□□ 1.41
CHRNB1-204ENST00000572857 CNTNAP5Q8WYK1 1306 aa23.87■■□□□ 1.41
CHRNB1-204ENST00000572857 DLL1O00548 723 aa23.87■■□□□ 1.41
CHRNB1-204ENST00000572857 NAPAP54920 295 aa23.87■■□□□ 1.41
CHRNB1-204ENST00000572857 UTP14CQ5TAP6 766 aaKnown RBP23.87■■□□□ 1.41
CHRNB1-204ENST00000572857 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.87■■□□□ 1.41
CHRNB1-204ENST00000572857 GPR20Q99678 358 aa23.87■■□□□ 1.41
CHRNB1-204ENST00000572857 USP26Q9BXU7 913 aa23.87■■□□□ 1.41
CHRNB1-204ENST00000572857 PCDHA6Q9UN73 950 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms