RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 LINC01553A4QN01 128 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 HIP1O00291 1037 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 LGR5O75473 907 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 RGS20O76081 388 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 MYCLP12524 364 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 ZNF200P98182 395 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 MBTPS1Q14703 1052 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 CELF3Q5SZQ8 465 aaKnown RBP11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 IFIT1BQ5T764 474 aaKnown RBP11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 CHD1LQ86WJ1 897 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 STAG2Q8N3U4 1231 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 SAMD3Q8N6K7 520 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 WNT8BQ93098 351 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 MTMR8Q96EF0 704 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 SPATA33Q96N06 139 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 EPHX3Q9H6B9 360 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 SUGCTQ9HAC7 445 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 MTUS1Q9ULD2 1270 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 PCDHA1Q9Y5I3 950 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 GBF1Q92538 1859 aa11.48□□□□□ -0.57
TRAPPC1-205ENST00000572656 EMSYQ7Z589 1322 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 KLRF2D3W0D1 207 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 ZBTB5O15062 677 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 PPP1R11O60927 126 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 GGPS1O95749 300 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 TGFB3P10600 412 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 SP2Q02086 613 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 NUCB1Q02818 461 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 HIC1Q14526 733 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 PGM5Q15124 567 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 HSDL1Q3SXM5 330 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 FAM117BQ6P1L5 589 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 SERINC5Q86VE9 423 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 C16orf70Q9BSU1 422 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 LRFN3Q9BTN0 628 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 MAD2L2Q9UI95 211 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 ARIH1Q9Y4X5 557 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 INSL6Q9Y581 213 aa11.47□□□□□ -0.57
TRAPPC1-205ENST00000572656 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 PALM3A6NDB9 673 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 RSPH10B2B2RC85 870 aa11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 SORBS3O60504 671 aa11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 AMHP03971 560 aa11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 RSPH10BP0C881 870 aa11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 UBA1P22314 1058 aaKnown RBP11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 HOXA13P31271 388 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 THPOP40225 353 aa11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 TRAF1Q13077 416 aa11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 MKRN4PQ13434 485 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 SEC23AQ15436 765 aa11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 TMEM31Q5JXX7 168 aa11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 DBF4BQ8NFT6 615 aa11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 IL31RAQ8NI17 732 aa11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 UBE2ZQ9H832 354 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 MLXIPQ9HAP2 919 aa11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 SCN5AQ14524 2016 aa11.46□□□□□ -0.57
TRAPPC1-205ENST00000572656 TANC1Q9C0D5 1861 aa11.46□□□□□ -0.58
TRAPPC1-205ENST00000572656 C17orf102A2RUQ5 167 aa11.45□□□□□ -0.58
TRAPPC1-205ENST00000572656 H3BRB1 525 aa11.45□□□□□ -0.58
TRAPPC1-205ENST00000572656 GCOM1H8Y6P7 765 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC1-205ENST00000572656 GPR37L1O60883 481 aa11.45□□□□□ -0.58
TRAPPC1-205ENST00000572656 POLR2MP0CAP2 368 aa11.45□□□□□ -0.58
TRAPPC1-205ENST00000572656 CCND2P30279 289 aa11.45□□□□□ -0.58
TRAPPC1-205ENST00000572656 HOXC8P31273 242 aa11.45□□□□□ -0.58
TRAPPC1-205ENST00000572656 HTRA4P83105 476 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC1-205ENST00000572656 PLEKHG4Q58EX7 1191 aa11.45□□□□□ -0.58
TRAPPC1-205ENST00000572656 FBXO22Q8NEZ5 403 aa11.45□□□□□ -0.58
TRAPPC1-205ENST00000572656 SP7Q8TDD2 431 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC1-205ENST00000572656 KHSRPQ92945 711 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRAPPC1-205ENST00000572656 ATP6V0A1Q93050 837 aa11.45□□□□□ -0.58
TRAPPC1-205ENST00000572656 TUT1Q9H6E5 874 aaKnown RBP11.45□□□□□ -0.58
TRAPPC1-205ENST00000572656 HCN4Q9Y3Q4 1203 aa11.45□□□□□ -0.58
TRAPPC1-205ENST00000572656 CAND2O75155 1236 aa11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 IGHDP01880 384 aa11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 SMIM10L2AP0DMW4 78 aa11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 SMIM10L2BP0DMW5 78 aa11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 SLC35G1Q2M3R5 365 aa11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 LEXMQ3ZCV2 418 aa11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 CYB5R4Q7L1T6 521 aa11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 FCHSD1Q86WN1 690 aa11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 HOMER1Q86YM7 354 aa11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 MYOCDQ8IZQ8 938 aa11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 GPKOWQ92917 476 aaPredicted RBP eCLIP11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 PIGSQ96S52 555 aa11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 C17orf80Q9BSJ5 609 aa11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 RIOX1Q9H6W3 641 aa11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 CD320Q9NPF0 282 aa11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 PRRC2BQ5JSZ5 2229 aaKnown RBP11.44□□□□□ -0.58
TRAPPC1-205ENST00000572656 PI4K2BG5E9Z4 385 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 RBAK-RBAKDNI3L0D1 243 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 TREHO43280 583 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 STAM2O75886 525 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 LGALS2P05162 132 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 GNAT1P11488 350 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 KCNA5P22460 613 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 TRDNQ13061 729 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 GRM4Q14833 912 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 PTPROQ16827 1216 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 GNPTABQ3T906 1256 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms