RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 C7orf31Q8N865 590 aa15.73■□□□□ 0.11
PRPF8-202ENST00000571346 RETREG2Q8NC44 543 aa15.73■□□□□ 0.11
PRPF8-202ENST00000571346 HERVK_113Q902F9 699 aa15.73■□□□□ 0.11
PRPF8-202ENST00000571346 KAT2BQ92831 832 aa15.73■□□□□ 0.11
PRPF8-202ENST00000571346 PBX4Q9BYU1 374 aa15.73■□□□□ 0.11
PRPF8-202ENST00000571346 CHD7Q9P2D1 2997 aa15.73■□□□□ 0.11
PRPF8-202ENST00000571346 DOCK5Q9H7D0 1870 aa15.72■□□□□ 0.11
PRPF8-202ENST00000571346 PITPNM1O00562 1244 aa15.72■□□□□ 0.11
PRPF8-202ENST00000571346 F2P00734 622 aa15.72■□□□□ 0.11
PRPF8-202ENST00000571346 PSEN2P49810 448 aa15.72■□□□□ 0.11
PRPF8-202ENST00000571346 BFSP2Q13515 415 aa15.72■□□□□ 0.11
PRPF8-202ENST00000571346 KIAA0753Q2KHM9 967 aa15.72■□□□□ 0.11
PRPF8-202ENST00000571346 HSDL1Q3SXM5 330 aa15.72■□□□□ 0.11
PRPF8-202ENST00000571346 CELF3Q5SZQ8 465 aaKnown RBP15.72■□□□□ 0.11
PRPF8-202ENST00000571346 GDF6Q6KF10 455 aaPredicted RBP15.72■□□□□ 0.11
PRPF8-202ENST00000571346 SGMS1Q86VZ5 419 aa15.72■□□□□ 0.11
PRPF8-202ENST00000571346 MLXIPQ9HAP2 919 aa15.72■□□□□ 0.11
PRPF8-202ENST00000571346 NAP1L2Q9ULW6 460 aaPredicted RBP15.72■□□□□ 0.11
PRPF8-202ENST00000571346 NOP56O00567 594 aaKnown RBP15.71■□□□□ 0.11
PRPF8-202ENST00000571346 NEFLP07196 543 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 PFKMP08237 780 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 SMARCA1P28370 1054 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 MRPS9P82933 396 aaKnown RBP15.71■□□□□ 0.11
PRPF8-202ENST00000571346 FGD1P98174 961 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 SP2Q02086 613 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 KRT32Q14532 448 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 RTN1Q16799 776 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 ADCK5Q3MIX3 580 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 MYSM1Q5VVJ2 828 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 APOA5Q6Q788 366 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 RASEFQ8IZ41 740 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 FANCBQ8NB91 859 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 RTEL1Q9NZ71 1219 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 HDAC6Q9UBN7 1215 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 GTF2IRD1Q9UHL9 959 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 SLC4A7Q9Y6M7 1214 aa15.71■□□□□ 0.11
PRPF8-202ENST00000571346 CNTNAP5Q8WYK1 1306 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 GOLGA8AA7E2F4 631 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 GOLGA8BA8MQT2 603 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 PIK3CDO00329 1044 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 ZBTB43O43298 467 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 FIBPO43427 364 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 STAM2O75886 525 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 ACTN1P12814 892 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 RFC2P35250 354 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 SP4Q02446 784 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 RAB30Q15771 203 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 UBE2SQ16763 222 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 DHX32Q7L7V1 743 aaKnown RBP15.7■□□□□ 0.1
PRPF8-202ENST00000571346 SESTD1Q86VW0 696 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 MAFAQ8NHW3 353 aaPredicted RBP15.7■□□□□ 0.1
PRPF8-202ENST00000571346 CAGE1Q8TC20 777 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 INPP4AQ96PE3 977 aaPredicted RBP15.7■□□□□ 0.1
PRPF8-202ENST00000571346 FTOQ9C0B1 505 aaKnown RBP eCLIP15.7■□□□□ 0.1
PRPF8-202ENST00000571346 ZNF576Q9H609 170 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 PSTPIP2Q9H939 334 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 RBM28Q9NW13 759 aaKnown RBP15.7■□□□□ 0.1
PRPF8-202ENST00000571346 MSRAQ9UJ68 235 aa15.7■□□□□ 0.1
PRPF8-202ENST00000571346 VCANP13611 3396 aa15.69■□□□□ 0.1
PRPF8-202ENST00000571346 KLF18A0A0U1RQI7 1052 aa15.69■□□□□ 0.1
PRPF8-202ENST00000571346 SPDYE3A6NKU9 549 aa15.69■□□□□ 0.1
PRPF8-202ENST00000571346 MEIS2O14770 477 aa15.69■□□□□ 0.1
PRPF8-202ENST00000571346 IQCF3P0C7M6 154 aa15.69■□□□□ 0.1
PRPF8-202ENST00000571346 TGFB3P10600 412 aa15.69■□□□□ 0.1
PRPF8-202ENST00000571346 HOXD8P13378 290 aaPredicted RBP15.69■□□□□ 0.1
PRPF8-202ENST00000571346 GRIN2CQ14957 1233 aa15.69■□□□□ 0.1
PRPF8-202ENST00000571346 PCNX4Q63HM2 1172 aa15.69■□□□□ 0.1
PRPF8-202ENST00000571346 CYFIP1Q7L576 1253 aa15.69■□□□□ 0.1
PRPF8-202ENST00000571346 AFAP1L1Q8TED9 768 aa15.69■□□□□ 0.1
PRPF8-202ENST00000571346 NKX2-4Q9H2Z4 354 aa15.69■□□□□ 0.1
PRPF8-202ENST00000571346 LGALS2P05162 132 aa15.68■□□□□ 0.1
PRPF8-202ENST00000571346 CPA1P15085 419 aa15.68■□□□□ 0.1
PRPF8-202ENST00000571346 ATP2A2P16615 1042 aaKnown RBP15.68■□□□□ 0.1
PRPF8-202ENST00000571346 RABGGTBP53611 331 aa15.68■□□□□ 0.1
PRPF8-202ENST00000571346 NAPAP54920 295 aa15.68■□□□□ 0.1
PRPF8-202ENST00000571346 SEMA3FQ13275 785 aa15.68■□□□□ 0.1
PRPF8-202ENST00000571346 NEDD9Q14511 834 aa15.68■□□□□ 0.1
PRPF8-202ENST00000571346 WWC2Q6AWC2 1192 aa15.68■□□□□ 0.1
PRPF8-202ENST00000571346 METTL7BQ6UX53 244 aa15.68■□□□□ 0.1
PRPF8-202ENST00000571346 LRRC8DQ7L1W4 858 aa15.68■□□□□ 0.1
PRPF8-202ENST00000571346 DHX38Q92620 1227 aaKnown RBP15.68■□□□□ 0.1
PRPF8-202ENST00000571346 VWCEQ96DN2 955 aa15.68■□□□□ 0.1
PRPF8-202ENST00000571346 JAKMIP1Q96N16 626 aaKnown RBP15.68■□□□□ 0.1
PRPF8-202ENST00000571346 CTAGE1Q96RT6 745 aa15.68■□□□□ 0.1
PRPF8-202ENST00000571346 BRPF3Q9ULD4 1205 aa15.68■□□□□ 0.1
PRPF8-202ENST00000571346 TRIP12Q14669 1992 aaPredicted RBP15.67■□□□□ 0.1
PRPF8-202ENST00000571346 SPATA31C2B4DYI2 1134 aa15.67■□□□□ 0.1
PRPF8-202ENST00000571346 HAS3O00219 553 aa15.67■□□□□ 0.1
PRPF8-202ENST00000571346 PPFIA4O75335 1185 aa15.67■□□□□ 0.1
PRPF8-202ENST00000571346 HMGB1P09429 215 aaKnown RBP15.67■□□□□ 0.1
PRPF8-202ENST00000571346 SELPP16109 830 aa15.67■□□□□ 0.1
PRPF8-202ENST00000571346 ICAM3P32942 547 aa15.67■□□□□ 0.1
PRPF8-202ENST00000571346 EXOSC10Q01780 885 aaKnown RBP15.67■□□□□ 0.1
PRPF8-202ENST00000571346 PPP2R2DQ66LE6 453 aa15.67■□□□□ 0.1
PRPF8-202ENST00000571346 XRRA1Q6P2D8 792 aa15.67■□□□□ 0.1
PRPF8-202ENST00000571346 NLRX1Q86UT6 975 aa15.67■□□□□ 0.1
PRPF8-202ENST00000571346 TRIM50Q86XT4 487 aa15.67■□□□□ 0.1
PRPF8-202ENST00000571346 BCAS3Q9H6U6 928 aa15.67■□□□□ 0.1
PRPF8-202ENST00000571346 SLC28A3Q9HAS3 691 aa15.67■□□□□ 0.1
PRPF8-202ENST00000571346 PKD2L1Q9P0L9 805 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms