RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 FUT8Q9BYC5 575 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 FAM114A2Q9NRY5 505 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 INTS9Q9NV88 658 aaKnown RBP12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 USP21Q9UK80 565 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 CAPN11Q9UMQ6 739 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 DAAM1Q9Y4D1 1078 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 LMO7Q8WWI1 1683 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 CTNND1O60716 968 aaKnown RBP12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 CYP2D6P10635 497 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 GTF2IP78347 998 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 TCP10Q12799 353 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 SNCBQ16143 134 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 GLE1Q53GS7 698 aaKnown RBP12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 OSBPL9Q96SU4 736 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 HPSEQ9Y251 543 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 VPS41P49754 854 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 KCNQ4P56696 695 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 DPYDQ12882 1025 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 CCDC197Q8NCU1 140 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 MAGOHBQ96A72 148 aaKnown RBP12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 TRIM10Q9UDY6 481 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 FEZ2Q9UHY8 353 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 NOVA2Q9UNW9 492 aaKnown RBP12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 LRRC53A6NM62 1247 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 HMGB1P1B2RPK0 211 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 CSF1RP07333 972 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 KRT15P19012 456 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 SLC8A1P32418 973 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 FAM178BQ8IXR5 827 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 SLFN12Q8IYM2 578 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 PPFIBP2Q8ND30 876 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 PBKQ96KB5 322 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 FNBP1Q96RU3 617 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 AGXT2Q9BYV1 514 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 PCDHA1Q9Y5I3 950 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 ESYT3A0FGR9 886 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 DDX39AO00148 427 aaKnown RBP12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 PLTPP55058 493 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 NKX1-1Q15270 411 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 UAP1Q16222 522 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 WDR44Q5JSH3 913 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 SPATA4Q8NEY3 305 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 RIN2Q8WYP3 895 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 SH2D4AQ9H788 454 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 EMILIN3Q9NT22 766 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 ITIH6Q6UXX5 1313 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 PALMO75781 387 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 AFPP02771 609 aaKnown RBP12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 BAG6P46379 1132 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 SMTNP53814 917 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 PSMD2Q13200 908 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 ALKBH5Q6P6C2 394 aaKnown RBP12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 CCDC63Q8NA47 563 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 JPH2Q9BR39 696 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 AP1M1Q9BXS5 423 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 SH3GLB2Q9NR46 395 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 TARSL2A2RTX5 802 aaKnown RBP12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 FERP16591 822 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 ATP2A2P16615 1042 aaKnown RBP12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 SP4Q02446 784 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 E2F5Q15329 346 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 TXNRD1Q16881 649 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 MCTP2Q6DN12 878 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 CEP128Q6ZU80 1094 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 UNC13DQ70J99 1090 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 LRRN4CLQ8ND94 238 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 MICAL1Q8TDZ2 1067 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 USP40Q9NVE5 1235 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 PSD3Q9NYI0 1048 aa12.15□□□□□ -0.46
PCDHGA4-201ENST00000571252 DIXDC1Q155Q3 683 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 ERFEQ4G0M1 354 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 CPVLQ9H3G5 476 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 KLHL14Q9P2G3 628 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 CEP83Q9Y592 693 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 NCK2O43639 380 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 GAS7O60861 476 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 HHATQ5VTY9 493 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 HNRNPLLQ8WVV9 542 aaKnown RBP12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 VIPAS39Q9H9C1 493 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 UBE2Q2LH0YL09 131 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 ZNF185O15231 689 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 GFPT1Q06210 699 aaPredicted RBP12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 ASPRV1Q53RT3 343 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 MUM1L1Q5H9M0 696 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 LMNTD2Q8IXW0 634 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 TCP11Q8WWU5 503 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 STMN2Q93045 179 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 FAM212AQ96EL1 285 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 PLAAQ9Y263 795 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 USTQ9Y2C2 406 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 PNPLA7Q6ZV29 1317 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 H0YIN7 160 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 N4BP1O75113 896 aaKnown RBP12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 LMNB1P20700 586 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 PRDX5P30044 214 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 LIN9Q5TKA1 542 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 FYB2Q5VWT5 728 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 TBC1D31Q96DN5 1066 aa12.14□□□□□ -0.47
PCDHGA4-201ENST00000571252 GJA3Q9Y6H8 435 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms