RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 NEK8Q86SG6 692 aa18.22■□□□□ 0.51
USB1-215ENST00000569252 CDHR1Q96JP9 859 aa18.22■□□□□ 0.51
USB1-215ENST00000569252 GUCD1Q96NT3 240 aa18.22■□□□□ 0.51
USB1-215ENST00000569252 VTA1Q9NP79 307 aa18.22■□□□□ 0.51
USB1-215ENST00000569252 RTEL1Q9NZ71 1219 aa18.22■□□□□ 0.51
USB1-215ENST00000569252 NRBP1Q9UHY1 535 aa18.22■□□□□ 0.51
USB1-215ENST00000569252 STXBP5LQ9Y2K9 1186 aa18.22■□□□□ 0.51
USB1-215ENST00000569252 ZNFX1Q9P2E3 1918 aaKnown RBP18.21■□□□□ 0.51
USB1-215ENST00000569252 CYP3A4P08684 503 aa18.21■□□□□ 0.51
USB1-215ENST00000569252 ATP2B1P20020 1258 aa18.21■□□□□ 0.51
USB1-215ENST00000569252 CNGA1P29973 690 aa18.21■□□□□ 0.51
USB1-215ENST00000569252 ACVR2BQ13705 512 aa18.21■□□□□ 0.51
USB1-215ENST00000569252 LETM2Q2VYF4 491 aa18.21■□□□□ 0.51
USB1-215ENST00000569252 SEPT14Q6ZU15 432 aa18.21■□□□□ 0.51
USB1-215ENST00000569252 EEPD1Q7L9B9 569 aa18.21■□□□□ 0.51
USB1-215ENST00000569252 ZHX1Q9UKY1 873 aaPredicted RBP18.21■□□□□ 0.51
USB1-215ENST00000569252 ADAMTS3O15072 1205 aa18.2■□□□□ 0.5
USB1-215ENST00000569252 MAFGO15525 162 aa18.2■□□□□ 0.5
USB1-215ENST00000569252 CCNT1O60563 726 aaKnown RBP18.2■□□□□ 0.5
USB1-215ENST00000569252 ZSCAN22P10073 491 aaPredicted RBP18.2■□□□□ 0.5
USB1-215ENST00000569252 EDNRBP24530 442 aa18.2■□□□□ 0.5
USB1-215ENST00000569252 TRAPPC10P48553 1259 aa18.2■□□□□ 0.5
USB1-215ENST00000569252 CEP55Q53EZ4 464 aa18.2■□□□□ 0.5
USB1-215ENST00000569252 FERMT3Q86UX7 667 aa18.2■□□□□ 0.5
USB1-215ENST00000569252 MORC4Q8TE76 937 aa18.2■□□□□ 0.5
USB1-215ENST00000569252 FGD4Q96M96 766 aa18.2■□□□□ 0.5
USB1-215ENST00000569252 COL25A1Q9BXS0 654 aaPredicted RBP18.2■□□□□ 0.5
USB1-215ENST00000569252 MTMR6Q9Y217 621 aa18.2■□□□□ 0.5
USB1-215ENST00000569252 ATP6V1DQ9Y5K8 247 aa18.2■□□□□ 0.5
USB1-215ENST00000569252 PRUNE2Q8WUY3 3088 aa18.2■□□□□ 0.5
USB1-215ENST00000569252 FRMPD4Q14CM0 1322 aa18.2■□□□□ 0.5
USB1-215ENST00000569252 SPTBN5Q9NRC6 3674 aaKnown RBP18.19■□□□□ 0.5
USB1-215ENST00000569252 ZNF236Q9UL36 1845 aa18.19■□□□□ 0.5
USB1-215ENST00000569252 SNAI1O95863 264 aaPredicted RBP18.19■□□□□ 0.5
USB1-215ENST00000569252 GCFC2P16383 781 aaKnown RBP18.19■□□□□ 0.5
USB1-215ENST00000569252 RILPL1Q5EBL4 403 aa18.19■□□□□ 0.5
USB1-215ENST00000569252 FOXD4L5Q5VV16 416 aaPredicted RBP18.19■□□□□ 0.5
USB1-215ENST00000569252 IQSEC1Q6DN90 963 aa18.19■□□□□ 0.5
USB1-215ENST00000569252 FOXD4L4Q8WXT5 416 aaPredicted RBP18.19■□□□□ 0.5
USB1-215ENST00000569252 TNFRSF25Q93038 417 aa18.19■□□□□ 0.5
USB1-215ENST00000569252 MXRA8Q9BRK3 442 aa18.19■□□□□ 0.5
USB1-215ENST00000569252 FAM184BQ9ULE4 1060 aa18.19■□□□□ 0.5
USB1-215ENST00000569252 MRVI1Q9Y6F6 885 aa18.19■□□□□ 0.5
USB1-215ENST00000569252 LTBP2Q14767 1821 aa18.19■□□□□ 0.5
USB1-215ENST00000569252 BAG4O95429 457 aaKnown RBP18.18■□□□□ 0.5
USB1-215ENST00000569252 MYCNP04198 464 aaPredicted RBP18.18■□□□□ 0.5
USB1-215ENST00000569252 TGFB3P10600 412 aa18.18■□□□□ 0.5
USB1-215ENST00000569252 CAPN2P17655 700 aa18.18■□□□□ 0.5
USB1-215ENST00000569252 SETQ01105 290 aaPredicted RBP18.18■□□□□ 0.5
USB1-215ENST00000569252 MTMR1Q13613 665 aa18.18■□□□□ 0.5
USB1-215ENST00000569252 TTLL4Q14679 1199 aa18.18■□□□□ 0.5
USB1-215ENST00000569252 PRAMEF19Q5SWL8 479 aa18.18■□□□□ 0.5
USB1-215ENST00000569252 GJC2Q5T442 439 aaPredicted RBP18.18■□□□□ 0.5
USB1-215ENST00000569252 FBXO16Q8IX29 292 aaPredicted RBP18.18■□□□□ 0.5
USB1-215ENST00000569252 SCFD2Q8WU76 684 aa18.18■□□□□ 0.5
USB1-215ENST00000569252 JADE2Q9NQC1 790 aa18.18■□□□□ 0.5
USB1-215ENST00000569252 ASTN1O14525 1302 aa18.18■□□□□ 0.5
USB1-215ENST00000569252 KIF28PB7ZC32 967 aa18.17■□□□□ 0.5
USB1-215ENST00000569252 FIBPO43427 364 aa18.17■□□□□ 0.5
USB1-215ENST00000569252 CIITAP33076 1130 aa18.17■□□□□ 0.5
USB1-215ENST00000569252 MRPS9P82933 396 aaKnown RBP18.17■□□□□ 0.5
USB1-215ENST00000569252 PRR16Q569H4 304 aa18.17■□□□□ 0.5
USB1-215ENST00000569252 PPP4R3AQ6IN85 833 aa18.17■□□□□ 0.5
USB1-215ENST00000569252 MOXD1Q6UVY6 613 aa18.17■□□□□ 0.5
USB1-215ENST00000569252 NIPA1Q7RTP0 329 aa18.17■□□□□ 0.5
USB1-215ENST00000569252 PLA2G4DQ86XP0 818 aa18.17■□□□□ 0.5
USB1-215ENST00000569252 GIMAP8Q8ND71 665 aaPredicted RBP18.17■□□□□ 0.5
USB1-215ENST00000569252 IL31RAQ8NI17 732 aa18.17■□□□□ 0.5
USB1-215ENST00000569252 GPRASP2Q96D09 838 aa18.17■□□□□ 0.5
USB1-215ENST00000569252 ZFP91Q96JP5 570 aaPredicted RBP18.17■□□□□ 0.5
USB1-215ENST00000569252 WDR11Q9BZH6 1224 aa18.17■□□□□ 0.5
USB1-215ENST00000569252 DDX20Q9UHI6 824 aaKnown RBP18.17■□□□□ 0.5
USB1-215ENST00000569252 DDX25Q9UHL0 483 aaKnown RBP18.17■□□□□ 0.5
USB1-215ENST00000569252 TCEAL9Q9UHQ7 104 aa18.17■□□□□ 0.5
USB1-215ENST00000569252 CIZ1Q9ULV3 898 aaPredicted RBP18.17■□□□□ 0.5
USB1-215ENST00000569252 CYP3A7-CYP3A51PA0A087WV96 503 aa18.16■□□□□ 0.5
USB1-215ENST00000569252 TXNP10599 105 aaKnown RBP18.16■□□□□ 0.5
USB1-215ENST00000569252 AKR1A1P14550 325 aa18.16■□□□□ 0.5
USB1-215ENST00000569252 CYP3A7P24462 503 aa18.16■□□□□ 0.5
USB1-215ENST00000569252 RTP1P59025 263 aa18.16■□□□□ 0.5
USB1-215ENST00000569252 TNFAIP2Q03169 654 aa18.16■□□□□ 0.5
USB1-215ENST00000569252 EARS2Q5JPH6 523 aaKnown RBP18.16■□□□□ 0.5
USB1-215ENST00000569252 TTC38Q5R3I4 469 aa18.16■□□□□ 0.5
USB1-215ENST00000569252 C9orf50Q5SZB4 431 aa18.16■□□□□ 0.5
USB1-215ENST00000569252 GPR153Q6NV75 609 aa18.16■□□□□ 0.5
USB1-215ENST00000569252 ZNF396Q96N95 335 aaPredicted RBP18.16■□□□□ 0.5
USB1-215ENST00000569252 CEP131Q9UPN4 1083 aa18.16■□□□□ 0.5
USB1-215ENST00000569252 ATP11BQ9Y2G3 1177 aa18.16■□□□□ 0.5
USB1-215ENST00000569252 UBIAD1Q9Y5Z9 338 aa18.16■□□□□ 0.5
USB1-215ENST00000569252 MEIS1O00470 390 aa18.15■□□□□ 0.5
USB1-215ENST00000569252 F13A1P00488 732 aa18.15■□□□□ 0.5
USB1-215ENST00000569252 ORC2Q13416 577 aaPredicted RBP18.15■□□□□ 0.5
USB1-215ENST00000569252 NEDD9Q14511 834 aa18.15■□□□□ 0.5
USB1-215ENST00000569252 CCDC144BQ3MJ40 725 aa18.15■□□□□ 0.5
USB1-215ENST00000569252 Q4G0T1 1027 aa18.15■□□□□ 0.5
USB1-215ENST00000569252 INPP4AQ96PE3 977 aaPredicted RBP18.15■□□□□ 0.5
USB1-215ENST00000569252 ZNF577Q9BSK1 485 aa18.15■□□□□ 0.5
USB1-215ENST00000569252 SPC25Q9HBM1 224 aa18.15■□□□□ 0.5
USB1-215ENST00000569252 DDX49Q9Y6V7 483 aaKnown RBP18.15■□□□□ 0.5
USB1-215ENST00000569252 PLXNA1Q9UIW2 1896 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms