RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 SYNRGQ9UMZ2 1314 aa18.97■□□□□ 0.63
CNEP1R1-210ENST00000568890 STAM2O75886 525 aa18.97■□□□□ 0.63
CNEP1R1-210ENST00000568890 CIITAP33076 1130 aa18.97■□□□□ 0.63
CNEP1R1-210ENST00000568890 BEX3Q00994 111 aa18.97■□□□□ 0.63
CNEP1R1-210ENST00000568890 TTLL4Q14679 1199 aa18.97■□□□□ 0.63
CNEP1R1-210ENST00000568890 LRRC41Q15345 812 aa18.97■□□□□ 0.63
CNEP1R1-210ENST00000568890 MCTP2Q6DN12 878 aa18.97■□□□□ 0.63
CNEP1R1-210ENST00000568890 CCSAPQ6IQ19 270 aaPredicted RBP18.97■□□□□ 0.63
CNEP1R1-210ENST00000568890 KRT25Q7Z3Z0 450 aa18.97■□□□□ 0.63
CNEP1R1-210ENST00000568890 KLHDC9Q8NEP7 349 aa18.97■□□□□ 0.63
CNEP1R1-210ENST00000568890 DIS3LQ8TF46 1054 aaKnown RBP18.97■□□□□ 0.63
CNEP1R1-210ENST00000568890 TDP2O95551 362 aa18.96■□□□□ 0.63
CNEP1R1-210ENST00000568890 TGFB3P10600 412 aa18.96■□□□□ 0.63
CNEP1R1-210ENST00000568890 UBA1P22314 1058 aaKnown RBP18.96■□□□□ 0.63
CNEP1R1-210ENST00000568890 USP11P51784 963 aa18.96■□□□□ 0.63
CNEP1R1-210ENST00000568890 GJA9P57773 515 aa18.96■□□□□ 0.63
CNEP1R1-210ENST00000568890 ARHGAP1Q07960 439 aa18.96■□□□□ 0.63
CNEP1R1-210ENST00000568890 NONOQ15233 471 aaKnown RBP eCLIP18.96■□□□□ 0.63
CNEP1R1-210ENST00000568890 CCDC194A0A1B0GVG4 234 aa18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 U2AF2P26368 475 aaKnown RBP eCLIP18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 MTMR1Q13613 665 aa18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 MYSM1Q5VVJ2 828 aa18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 TLK2Q86UE8 772 aa18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 GJA10Q969M2 543 aa18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 EHMT1Q9H9B1 1298 aa18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 FIBPO43427 364 aa18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 MYCNP04198 464 aaPredicted RBP18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 KCNA2P16389 499 aa18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 SYT1P21579 422 aa18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 NKX3-2P78367 333 aa18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 HSDL1Q3SXM5 330 aa18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 UBE2Q1Q7Z7E8 422 aa18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 GPRASP2Q96D09 838 aa18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 UPF3AQ9H1J1 476 aaKnown RBP18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 FOXP1Q9H334 677 aaPredicted RBP18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 PKD2L1Q9P0L9 805 aa18.95■□□□□ 0.62
CNEP1R1-210ENST00000568890 CYP3A7-CYP3A51PA0A087WV96 503 aa18.94■□□□□ 0.62
CNEP1R1-210ENST00000568890 C6orf222P0C671 652 aaPredicted RBP18.94■□□□□ 0.62
CNEP1R1-210ENST00000568890 CYP3A7P24462 503 aa18.94■□□□□ 0.62
CNEP1R1-210ENST00000568890 ZNF76P36508 570 aa18.94■□□□□ 0.62
CNEP1R1-210ENST00000568890 PRR16Q569H4 304 aa18.94■□□□□ 0.62
CNEP1R1-210ENST00000568890 Q9Y3F1 56 aa18.94■□□□□ 0.62
CNEP1R1-210ENST00000568890 ITGB3BPQ13352 177 aaPredicted RBP18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 KCNA10Q16322 511 aa18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 LETM2Q2VYF4 491 aa18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 GNPTABQ3T906 1256 aa18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 GNASQ5JWF2 1037 aa18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 CELF3Q5SZQ8 465 aaKnown RBP18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 CYFIP1Q7L576 1253 aa18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 PLA2G4DQ86XP0 818 aa18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 BRMS1Q9HCU9 246 aa18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 DHX15O43143 795 aaKnown RBP18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 SLC37A4O43826 429 aa18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 CAPN15O75808 1086 aa18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 GGPS1O95749 300 aa18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 TOB1P50616 345 aaPredicted RBP18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 SAFBQ15424 915 aaKnown RBP eCLIP18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 NLRX1Q86UT6 975 aa18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 NOSTRINQ8IVI9 506 aa18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 AFG1LQ8WV93 481 aa18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 MBOAT7Q96N66 472 aa18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 AGO4Q9HCK5 861 aaKnown RBP18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 KIF3AQ9Y496 699 aa18.93■□□□□ 0.62
CNEP1R1-210ENST00000568890 MYH7BA7E2Y1 1941 aa18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 MAFGO15525 162 aa18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 KCNV1Q6PIU1 500 aa18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 NEK8Q86SG6 692 aa18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 PAWRQ96IZ0 340 aaKnown RBP18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 SENP7Q9BQF6 1050 aa18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 A6NJR5 290 aa18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 NKRFO15226 690 aaKnown RBP eCLIP18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 MSH4O15457 936 aa18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 FARP2O94887 1054 aaPredicted RBP18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 NBR1Q14596 966 aa18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 FSCN1Q16658 493 aaKnown RBP18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 MCTP1Q6DN14 999 aa18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 NIPA1Q7RTP0 329 aa18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 DHX37Q8IY37 1157 aaKnown RBP18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 OR6J1Q8NGC5 347 aa18.92■□□□□ 0.62
CNEP1R1-210ENST00000568890 KIAA1217Q5T5P2 1943 aa18.91■□□□□ 0.62
CNEP1R1-210ENST00000568890 H3BQV1 296 aa18.91■□□□□ 0.62
CNEP1R1-210ENST00000568890 GH1P01241 217 aa18.91■□□□□ 0.62
CNEP1R1-210ENST00000568890 COL6A1P12109 1028 aa18.91■□□□□ 0.62
CNEP1R1-210ENST00000568890 CST5P28325 142 aaPredicted RBP18.91■□□□□ 0.62
CNEP1R1-210ENST00000568890 PKP1Q13835 747 aa18.91■□□□□ 0.62
CNEP1R1-210ENST00000568890 Q4G0T1 1027 aa18.91■□□□□ 0.62
CNEP1R1-210ENST00000568890 IFFO2Q5TF58 517 aa18.91■□□□□ 0.62
CNEP1R1-210ENST00000568890 ARRDC4Q8NCT1 418 aa18.91■□□□□ 0.62
CNEP1R1-210ENST00000568890 EMID1Q96A84 441 aaPredicted RBP18.91■□□□□ 0.62
CNEP1R1-210ENST00000568890 FERMT2Q96AC1 680 aa18.91■□□□□ 0.62
CNEP1R1-210ENST00000568890 CCNT1O60563 726 aaKnown RBP18.9■□□□□ 0.62
CNEP1R1-210ENST00000568890 ASGR1P07306 291 aa18.9■□□□□ 0.62
CNEP1R1-210ENST00000568890 ATP2B1P20020 1258 aa18.9■□□□□ 0.62
CNEP1R1-210ENST00000568890 PPP4R3AQ6IN85 833 aa18.9■□□□□ 0.62
CNEP1R1-210ENST00000568890 RNF180Q86T96 592 aa18.9■□□□□ 0.62
CNEP1R1-210ENST00000568890 FERMT3Q86UX7 667 aa18.9■□□□□ 0.62
CNEP1R1-210ENST00000568890 AP5M1Q9H0R1 490 aa18.9■□□□□ 0.62
CNEP1R1-210ENST00000568890 MTMR6Q9Y217 621 aa18.9■□□□□ 0.62
CNEP1R1-210ENST00000568890 IPO5O00410 1097 aaKnown RBP18.9■□□□□ 0.62
CNEP1R1-210ENST00000568890 DNM1LO00429 736 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms