RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 SEMA3FQ13275 785 aa19.03■□□□□ 0.64
COMMD4-224ENST00000568877 LY6KQ17RY6 165 aa19.03■□□□□ 0.64
COMMD4-224ENST00000568877 LHX8Q68G74 356 aa19.03■□□□□ 0.64
COMMD4-224ENST00000568877 MOXD1Q6UVY6 613 aa19.03■□□□□ 0.64
COMMD4-224ENST00000568877 PLA2G4DQ86XP0 818 aa19.03■□□□□ 0.64
COMMD4-224ENST00000568877 DEFB118Q96PH6 123 aa19.03■□□□□ 0.64
COMMD4-224ENST00000568877 NAP1L4Q99733 375 aaKnown RBP19.03■□□□□ 0.64
COMMD4-224ENST00000568877 DAXXQ9UER7 740 aaPredicted RBP19.03■□□□□ 0.64
COMMD4-224ENST00000568877 GNEQ9Y223 722 aaKnown RBP19.03■□□□□ 0.64
COMMD4-224ENST00000568877 NKRFO15226 690 aaKnown RBP eCLIP19.02■□□□□ 0.64
COMMD4-224ENST00000568877 CCNT1O60563 726 aaKnown RBP19.02■□□□□ 0.64
COMMD4-224ENST00000568877 TDP2O95551 362 aa19.02■□□□□ 0.64
COMMD4-224ENST00000568877 GJB1P08034 283 aa19.02■□□□□ 0.64
COMMD4-224ENST00000568877 ARP10275 920 aa19.02■□□□□ 0.64
COMMD4-224ENST00000568877 GCFC2P16383 781 aaKnown RBP19.02■□□□□ 0.64
COMMD4-224ENST00000568877 SETQ01105 290 aaPredicted RBP19.02■□□□□ 0.64
COMMD4-224ENST00000568877 SP2Q02086 613 aa19.02■□□□□ 0.64
COMMD4-224ENST00000568877 Q4G0T1 1027 aa19.02■□□□□ 0.64
COMMD4-224ENST00000568877 PRR16Q569H4 304 aa19.02■□□□□ 0.64
COMMD4-224ENST00000568877 PPP4R3AQ6IN85 833 aa19.02■□□□□ 0.64
COMMD4-224ENST00000568877 FERMT3Q86UX7 667 aa19.02■□□□□ 0.64
COMMD4-224ENST00000568877 TNS4Q8IZW8 715 aa19.02■□□□□ 0.64
COMMD4-224ENST00000568877 LENG9Q96B70 501 aa19.02■□□□□ 0.64
COMMD4-224ENST00000568877 LENG1Q96BZ8 264 aaPredicted RBP19.02■□□□□ 0.64
COMMD4-224ENST00000568877 ABHD8Q96I13 439 aa19.02■□□□□ 0.64
COMMD4-224ENST00000568877 MBOAT7Q96N66 472 aa19.02■□□□□ 0.64
COMMD4-224ENST00000568877 KCNH7Q9NS40 1196 aa19.02■□□□□ 0.64
COMMD4-224ENST00000568877 NOL7Q9UMY1 257 aaKnown RBP19.02■□□□□ 0.64
COMMD4-224ENST00000568877 ATP2B1P20020 1258 aa19.01■□□□□ 0.63
COMMD4-224ENST00000568877 TRAPPC10P48553 1259 aa19.01■□□□□ 0.63
COMMD4-224ENST00000568877 GJC2Q5T442 439 aaPredicted RBP19.01■□□□□ 0.63
COMMD4-224ENST00000568877 COPS5Q92905 334 aa19.01■□□□□ 0.63
COMMD4-224ENST00000568877 SENP7Q9BQF6 1050 aa19.01■□□□□ 0.63
COMMD4-224ENST00000568877 TMEM106CQ9BVX2 250 aa19.01■□□□□ 0.63
COMMD4-224ENST00000568877 AGO4Q9HCK5 861 aaKnown RBP19.01■□□□□ 0.63
COMMD4-224ENST00000568877 DDX25Q9UHL0 483 aaKnown RBP19.01■□□□□ 0.63
COMMD4-224ENST00000568877 Q9Y3F1 56 aa19.01■□□□□ 0.63
COMMD4-224ENST00000568877 MYH7BA7E2Y1 1941 aa19■□□□□ 0.63
COMMD4-224ENST00000568877 WNT7AO00755 349 aa19■□□□□ 0.63
COMMD4-224ENST00000568877 DYNC1LI2O43237 492 aaPredicted RBP19■□□□□ 0.63
COMMD4-224ENST00000568877 ATP9AO75110 1047 aa19■□□□□ 0.63
COMMD4-224ENST00000568877 UBA1P22314 1058 aaKnown RBP19■□□□□ 0.63
COMMD4-224ENST00000568877 PTGS1P23219 599 aa19■□□□□ 0.63
COMMD4-224ENST00000568877 BRAPQ7Z569 592 aa19■□□□□ 0.63
COMMD4-224ENST00000568877 XPNPEP3Q9NQH7 507 aa19■□□□□ 0.63
COMMD4-224ENST00000568877 SLC37A4O43826 429 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 SGPL1O95470 568 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 GGPS1O95749 300 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 GH1P01241 217 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 ZSCAN22P10073 491 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-224ENST00000568877 KCNA2P16389 499 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 TOB1P50616 345 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-224ENST00000568877 RESTQ13127 1097 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 PKP1Q13835 747 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 NEDD9Q14511 834 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 RILPL1Q5EBL4 403 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 TTC38Q5R3I4 469 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 CELF3Q5SZQ8 465 aaKnown RBP18.99■□□□□ 0.63
COMMD4-224ENST00000568877 TLK2Q86UE8 772 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 DHX37Q8IY37 1157 aaKnown RBP18.99■□□□□ 0.63
COMMD4-224ENST00000568877 GIMAP8Q8ND71 665 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-224ENST00000568877 OR6J1Q8NGC5 347 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 U2AF1L4Q8WU68 220 aaKnown RBP18.99■□□□□ 0.63
COMMD4-224ENST00000568877 ZNF577Q9BSK1 485 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 CRISPLD2Q9H0B8 497 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 AP5M1Q9H0R1 490 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 ZSCAN16Q9H4T2 348 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-224ENST00000568877 PKD2L1Q9P0L9 805 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 KIAA1217Q5T5P2 1943 aa18.99■□□□□ 0.63
COMMD4-224ENST00000568877 IPO5O00410 1097 aaKnown RBP18.98■□□□□ 0.63
COMMD4-224ENST00000568877 MSH4O15457 936 aa18.98■□□□□ 0.63
COMMD4-224ENST00000568877 PGK1P00558 417 aa18.98■□□□□ 0.63
COMMD4-224ENST00000568877 GJA8P48165 433 aa18.98■□□□□ 0.63
COMMD4-224ENST00000568877 GJA9P57773 515 aa18.98■□□□□ 0.63
COMMD4-224ENST00000568877 ARHGAP1Q07960 439 aa18.98■□□□□ 0.63
COMMD4-224ENST00000568877 LAMC2Q13753 1193 aa18.98■□□□□ 0.63
COMMD4-224ENST00000568877 MYSM1Q5VVJ2 828 aa18.98■□□□□ 0.63
COMMD4-224ENST00000568877 UPF3AQ9H1J1 476 aaKnown RBP18.98■□□□□ 0.63
COMMD4-224ENST00000568877 BCAS3Q9H6U6 928 aa18.98■□□□□ 0.63
COMMD4-224ENST00000568877 MLXIPQ9HAP2 919 aa18.98■□□□□ 0.63
COMMD4-224ENST00000568877 SPC25Q9HBM1 224 aa18.98■□□□□ 0.63
COMMD4-224ENST00000568877 OGDHLQ9ULD0 1010 aa18.98■□□□□ 0.63
COMMD4-224ENST00000568877 SYNRGQ9UMZ2 1314 aa18.98■□□□□ 0.63
COMMD4-224ENST00000568877 POTEFA5A3E0 1075 aa18.97■□□□□ 0.63
COMMD4-224ENST00000568877 SORBS3O60504 671 aa18.97■□□□□ 0.63
COMMD4-224ENST00000568877 ADAMTS4O75173 837 aa18.97■□□□□ 0.63
COMMD4-224ENST00000568877 TFRCP02786 760 aaKnown RBP18.97■□□□□ 0.63
COMMD4-224ENST00000568877 MCM7P33993 719 aa18.97■□□□□ 0.63
COMMD4-224ENST00000568877 NKX3-2P78367 333 aa18.97■□□□□ 0.63
COMMD4-224ENST00000568877 ITGB3BPQ13352 177 aaPredicted RBP18.97■□□□□ 0.63
COMMD4-224ENST00000568877 ORC2Q13416 577 aaPredicted RBP18.97■□□□□ 0.63
COMMD4-224ENST00000568877 ZNF174Q15697 407 aa18.97■□□□□ 0.63
COMMD4-224ENST00000568877 METTL7BQ6UX53 244 aa18.97■□□□□ 0.63
COMMD4-224ENST00000568877 CYFIP1Q7L576 1253 aa18.97■□□□□ 0.63
COMMD4-224ENST00000568877 EMID1Q96A84 441 aaPredicted RBP18.97■□□□□ 0.63
COMMD4-224ENST00000568877 UIMC1Q96RL1 719 aa18.97■□□□□ 0.63
COMMD4-224ENST00000568877 NFASCO94856 1347 aa18.97■□□□□ 0.63
COMMD4-224ENST00000568877 NEMFO60524 1076 aa18.96■□□□□ 0.63
COMMD4-224ENST00000568877 FARP2O94887 1054 aaPredicted RBP18.96■□□□□ 0.63
COMMD4-224ENST00000568877 BRD1O95696 1058 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms