RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 TMTC2Q8N394 836 aa14.86□□□□□ -0.03
TSC2-220ENST00000568238 MAFAQ8NHW3 353 aaPredicted RBP14.86□□□□□ -0.03
TSC2-220ENST00000568238 KAT2BQ92831 832 aa14.86□□□□□ -0.03
TSC2-220ENST00000568238 NEK1Q96PY6 1258 aa14.86□□□□□ -0.03
TSC2-220ENST00000568238 ZNF576Q9H609 170 aa14.86□□□□□ -0.03
TSC2-220ENST00000568238 TET1Q8NFU7 2136 aa14.86□□□□□ -0.03
TSC2-220ENST00000568238 ZBBXA8MT70 800 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 PLEKHA8P1O95397 391 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 GGPS1O95749 300 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 F2P00734 622 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 CALM1P0DP23 149 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 CALM2P0DP24 149 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 CALM3P0DP25 149 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 TGFB3P10600 412 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 CPA1P15085 419 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 UBA1P22314 1058 aaKnown RBP14.85□□□□□ -0.03
TSC2-220ENST00000568238 SMARCA1P28370 1054 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 RAB30Q15771 203 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 PTGISQ16647 500 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 CELF3Q5SZQ8 465 aaKnown RBP14.85□□□□□ -0.03
TSC2-220ENST00000568238 DEFB128Q7Z7B8 93 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 CCDC155Q8N6L0 562 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 RETREG2Q8NC44 543 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 VWCEQ96DN2 955 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 TCEANC2Q96MN5 208 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 LRRC2Q9BYS8 371 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 MSRAQ9UJ68 235 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 SLC12A7Q9Y666 1083 aa14.85□□□□□ -0.03
TSC2-220ENST00000568238 SORBS3O60504 671 aa14.84□□□□□ -0.03
TSC2-220ENST00000568238 HOXD8P13378 290 aaPredicted RBP14.84□□□□□ -0.03
TSC2-220ENST00000568238 RXRAP19793 462 aa14.84□□□□□ -0.03
TSC2-220ENST00000568238 PSEN2P49810 448 aa14.84□□□□□ -0.03
TSC2-220ENST00000568238 MFSD10Q14728 455 aa14.84□□□□□ -0.03
TSC2-220ENST00000568238 GRIN2CQ14957 1233 aa14.84□□□□□ -0.03
TSC2-220ENST00000568238 GNPTABQ3T906 1256 aa14.84□□□□□ -0.03
TSC2-220ENST00000568238 MYSM1Q5VVJ2 828 aa14.84□□□□□ -0.03
TSC2-220ENST00000568238 GDF6Q6KF10 455 aaPredicted RBP14.84□□□□□ -0.03
TSC2-220ENST00000568238 SRBD1Q8N5C6 995 aaKnown RBP14.84□□□□□ -0.03
TSC2-220ENST00000568238 C7orf31Q8N865 590 aa14.84□□□□□ -0.03
TSC2-220ENST00000568238 SMARCC2Q8TAQ2 1214 aa14.84□□□□□ -0.03
TSC2-220ENST00000568238 CAGE1Q8TC20 777 aa14.84□□□□□ -0.03
TSC2-220ENST00000568238 CUL5Q93034 780 aa14.84□□□□□ -0.03
TSC2-220ENST00000568238 SPATA33Q96N06 139 aa14.84□□□□□ -0.03
TSC2-220ENST00000568238 SLC4A7Q9Y6M7 1214 aa14.84□□□□□ -0.03
TSC2-220ENST00000568238 PIK3CDO00329 1044 aa14.83□□□□□ -0.04
TSC2-220ENST00000568238 STAM2O75886 525 aa14.83□□□□□ -0.04
TSC2-220ENST00000568238 IQCF3P0C7M6 154 aa14.83□□□□□ -0.04
TSC2-220ENST00000568238 ACTN1P12814 892 aa14.83□□□□□ -0.04
TSC2-220ENST00000568238 KIAA0753Q2KHM9 967 aa14.83□□□□□ -0.04
TSC2-220ENST00000568238 HSDL1Q3SXM5 330 aa14.83□□□□□ -0.04
TSC2-220ENST00000568238 BLOC1S2Q6QNY1 142 aa14.83□□□□□ -0.04
TSC2-220ENST00000568238 SGMS1Q86VZ5 419 aa14.83□□□□□ -0.04
TSC2-220ENST00000568238 MICU3Q86XE3 530 aa14.83□□□□□ -0.04
TSC2-220ENST00000568238 RAB11FIP4Q86YS3 637 aa14.83□□□□□ -0.04
TSC2-220ENST00000568238 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.83□□□□□ -0.04
TSC2-220ENST00000568238 CMTR1Q8N1G2 835 aaKnown RBP14.83□□□□□ -0.04
TSC2-220ENST00000568238 AFAP1L1Q8TED9 768 aa14.83□□□□□ -0.04
TSC2-220ENST00000568238 GPKOWQ92917 476 aaPredicted RBP eCLIP14.83□□□□□ -0.04
TSC2-220ENST00000568238 ZFP91Q96JP5 570 aaPredicted RBP14.83□□□□□ -0.04
TSC2-220ENST00000568238 ALG1Q9BT22 464 aa14.83□□□□□ -0.04
TSC2-220ENST00000568238 GTF2IRD1Q9UHL9 959 aa14.83□□□□□ -0.04
TSC2-220ENST00000568238 PTPRSQ13332 1948 aa14.83□□□□□ -0.04
TSC2-220ENST00000568238 HAS3O00219 553 aa14.82□□□□□ -0.04
TSC2-220ENST00000568238 DLL1O00548 723 aa14.82□□□□□ -0.04
TSC2-220ENST00000568238 PPFIA4O75335 1185 aa14.82□□□□□ -0.04
TSC2-220ENST00000568238 HMGB1P09429 215 aaKnown RBP14.82□□□□□ -0.04
TSC2-220ENST00000568238 ATP2A2P16615 1042 aaKnown RBP14.82□□□□□ -0.04
TSC2-220ENST00000568238 PSMA5P28066 241 aa14.82□□□□□ -0.04
TSC2-220ENST00000568238 MRPS9P82933 396 aaKnown RBP14.82□□□□□ -0.04
TSC2-220ENST00000568238 SP2Q02086 613 aa14.82□□□□□ -0.04
TSC2-220ENST00000568238 USP17L6PQ6QN14 398 aa14.82□□□□□ -0.04
TSC2-220ENST00000568238 TMTC3Q6ZXV5 915 aa14.82□□□□□ -0.04
TSC2-220ENST00000568238 DHX32Q7L7V1 743 aaKnown RBP14.82□□□□□ -0.04
TSC2-220ENST00000568238 INPP4AQ96PE3 977 aaPredicted RBP14.82□□□□□ -0.04
TSC2-220ENST00000568238 CTAGE1Q96RT6 745 aa14.82□□□□□ -0.04
TSC2-220ENST00000568238 BACH2Q9BYV9 841 aa14.82□□□□□ -0.04
TSC2-220ENST00000568238 UPF3BQ9BZI7 483 aaKnown RBP14.82□□□□□ -0.04
TSC2-220ENST00000568238 MLXIPQ9HAP2 919 aa14.82□□□□□ -0.04
TSC2-220ENST00000568238 UPF2Q9HAU5 1272 aaKnown RBP14.82□□□□□ -0.04
TSC2-220ENST00000568238 HDAC6Q9UBN7 1215 aa14.82□□□□□ -0.04
TSC2-220ENST00000568238 XIRP2A4UGR9 3374 aa14.82□□□□□ -0.04
TSC2-220ENST00000568238 FIBPO43427 364 aa14.81□□□□□ -0.04
TSC2-220ENST00000568238 RPS6KB1P23443 525 aa14.81□□□□□ -0.04
TSC2-220ENST00000568238 ICAM3P32942 547 aa14.81□□□□□ -0.04
TSC2-220ENST00000568238 RABGGTBP53611 331 aa14.81□□□□□ -0.04
TSC2-220ENST00000568238 ANAPC15P60006 121 aa14.81□□□□□ -0.04
TSC2-220ENST00000568238 EXOSC10Q01780 885 aaKnown RBP14.81□□□□□ -0.04
TSC2-220ENST00000568238 XRRA1Q6P2D8 792 aa14.81□□□□□ -0.04
TSC2-220ENST00000568238 SYNE3Q6ZMZ3 975 aa14.81□□□□□ -0.04
TSC2-220ENST00000568238 FANCBQ8NB91 859 aa14.81□□□□□ -0.04
TSC2-220ENST00000568238 DHX38Q92620 1227 aaKnown RBP14.81□□□□□ -0.04
TSC2-220ENST00000568238 GAS2L1Q99501 681 aaPredicted RBP14.81□□□□□ -0.04
TSC2-220ENST00000568238 C22orf23Q9BZE7 217 aa14.81□□□□□ -0.04
TSC2-220ENST00000568238 FTOQ9C0B1 505 aaKnown RBP eCLIP14.81□□□□□ -0.04
TSC2-220ENST00000568238 NKX2-4Q9H2Z4 354 aa14.81□□□□□ -0.04
TSC2-220ENST00000568238 SLC28A3Q9HAS3 691 aa14.81□□□□□ -0.04
TSC2-220ENST00000568238 YBX2Q9Y2T7 364 aaKnown RBP14.81□□□□□ -0.04
TSC2-220ENST00000568238 KAT6AQ92794 2004 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 hCG_1642624A0A1W2PR95 340 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 SPATA31C2B4DYI2 1134 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms