RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 MEIS2O14770 477 aa16.45■□□□□ 0.22
COMMD4-216ENST00000567023 GGPS1O95749 300 aa16.45■□□□□ 0.22
COMMD4-216ENST00000567023 PSEN2P49810 448 aa16.45■□□□□ 0.22
COMMD4-216ENST00000567023 NFXL1Q6ZNB6 911 aa16.45■□□□□ 0.22
COMMD4-216ENST00000567023 DEFB128Q7Z7B8 93 aa16.45■□□□□ 0.22
COMMD4-216ENST00000567023 SGMS1Q86VZ5 419 aa16.45■□□□□ 0.22
COMMD4-216ENST00000567023 SRBD1Q8N5C6 995 aaKnown RBP16.45■□□□□ 0.22
COMMD4-216ENST00000567023 INPP4AQ96PE3 977 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-216ENST00000567023 HDAC6Q9UBN7 1215 aa16.45■□□□□ 0.22
COMMD4-216ENST00000567023 SPATA31C2B4DYI2 1134 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 PARNO95453 639 aaKnown RBP16.44■□□□□ 0.22
COMMD4-216ENST00000567023 ACTN1P12814 892 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 ATP2A2P16615 1042 aaKnown RBP16.44■□□□□ 0.22
COMMD4-216ENST00000567023 UBA1P22314 1058 aaKnown RBP16.44■□□□□ 0.22
COMMD4-216ENST00000567023 CHMP4BP1P59074 171 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 MFSD10Q14728 455 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 KIAA0753Q2KHM9 967 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 TSGA10IPQ3SY00 556 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 GNPTABQ3T906 1256 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 RNF20Q5VTR2 975 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 XRRA1Q6P2D8 792 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 CCDC155Q8N6L0 562 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 C7orf31Q8N865 590 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 PHOSPHO2Q8TCD6 241 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 PIBF1Q8WXW3 757 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 SPATA33Q96N06 139 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 C16orf70Q9BSU1 422 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 SEC63Q9UGP8 760 aaKnown RBP16.44■□□□□ 0.22
COMMD4-216ENST00000567023 YBX2Q9Y2T7 364 aaKnown RBP16.44■□□□□ 0.22
COMMD4-216ENST00000567023 PCDHA11Q9Y5I1 949 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 SLC12A7Q9Y666 1083 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 SCN5AQ14524 2016 aa16.44■□□□□ 0.22
COMMD4-216ENST00000567023 PLEKHA8P1O95397 391 aa16.43■□□□□ 0.22
COMMD4-216ENST00000567023 ZNF286BP0CG31 522 aa16.43■□□□□ 0.22
COMMD4-216ENST00000567023 GPNMBQ14956 572 aa16.43■□□□□ 0.22
COMMD4-216ENST00000567023 FANCBQ8NB91 859 aa16.43■□□□□ 0.22
COMMD4-216ENST00000567023 DHX38Q92620 1227 aaKnown RBP16.43■□□□□ 0.22
COMMD4-216ENST00000567023 GPKOWQ92917 476 aaPredicted RBP eCLIP16.43■□□□□ 0.22
COMMD4-216ENST00000567023 MLXIPQ9HAP2 919 aa16.43■□□□□ 0.22
COMMD4-216ENST00000567023 SLC28A3Q9HAS3 691 aa16.43■□□□□ 0.22
COMMD4-216ENST00000567023 TRIP12Q14669 1992 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-216ENST00000567023 TANC1Q9C0D5 1861 aa16.43■□□□□ 0.22
COMMD4-216ENST00000567023 ZBBXA8MT70 800 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 FIBPO43427 364 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 BAIAP3O94812 1187 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 CKBP12277 381 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 SELPP16109 830 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 RABGGTBP53611 331 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 PTK7Q13308 1070 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 NEDD9Q14511 834 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 PCNX4Q63HM2 1172 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 USP17L6PQ6QN14 398 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 METTL7BQ6UX53 244 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 SKAP1Q86WV1 359 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 SMARCC2Q8TAQ2 1214 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 CUL5Q93034 780 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 ZFP91Q96JP5 570 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-216ENST00000567023 SLC9A7Q96T83 725 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 SENP7Q9BQF6 1050 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 ALG1Q9BT22 464 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 NKX2-4Q9H2Z4 354 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 MUC3AQ02505 3323 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 XIRP2A4UGR9 3374 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 GBF1Q92538 1859 aa16.42■□□□□ 0.22
COMMD4-216ENST00000567023 H3BRB1 525 aa16.41■□□□□ 0.22
COMMD4-216ENST00000567023 CXCL10P02778 98 aa16.41■□□□□ 0.22
COMMD4-216ENST00000567023 RXRAP19793 462 aa16.41■□□□□ 0.22
COMMD4-216ENST00000567023 HOXC8P31273 242 aa16.41■□□□□ 0.22
COMMD4-216ENST00000567023 EXOSC10Q01780 885 aaKnown RBP16.41■□□□□ 0.22
COMMD4-216ENST00000567023 SEMA3FQ13275 785 aa16.41■□□□□ 0.22
COMMD4-216ENST00000567023 TMTC3Q6ZXV5 915 aa16.41■□□□□ 0.22
COMMD4-216ENST00000567023 LRRC8DQ7L1W4 858 aa16.41■□□□□ 0.22
COMMD4-216ENST00000567023 CMTR1Q8N1G2 835 aaKnown RBP16.41■□□□□ 0.22
COMMD4-216ENST00000567023 TET1Q8NFU7 2136 aa16.41■□□□□ 0.22
COMMD4-216ENST00000567023 NEK1Q96PY6 1258 aa16.41■□□□□ 0.22
COMMD4-216ENST00000567023 GAS2L1Q99501 681 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-216ENST00000567023 USP26Q9BXU7 913 aa16.41■□□□□ 0.22
COMMD4-216ENST00000567023 LRRC2Q9BYS8 371 aa16.41■□□□□ 0.22
COMMD4-216ENST00000567023 FTOQ9C0B1 505 aaKnown RBP eCLIP16.41■□□□□ 0.22
COMMD4-216ENST00000567023 PRDM12Q9H4Q4 367 aa16.41■□□□□ 0.22
COMMD4-216ENST00000567023 TUT1Q9H6E5 874 aaKnown RBP16.41■□□□□ 0.22
COMMD4-216ENST00000567023 BCAS3Q9H6U6 928 aa16.41■□□□□ 0.22
COMMD4-216ENST00000567023 PSTPIP2Q9H939 334 aa16.41■□□□□ 0.22
COMMD4-216ENST00000567023 TRANK1O15050 2925 aa16.41■□□□□ 0.22
COMMD4-216ENST00000567023 MYO9BQ13459 2157 aa16.4■□□□□ 0.22
COMMD4-216ENST00000567023 REV3LO60673 3130 aa16.4■□□□□ 0.22
COMMD4-216ENST00000567023 CUL9Q8IWT3 2517 aa16.4■□□□□ 0.22
COMMD4-216ENST00000567023 HIC1Q14526 733 aa16.4■□□□□ 0.22
COMMD4-216ENST00000567023 TRIM71Q2Q1W2 868 aaKnown RBP16.4■□□□□ 0.22
COMMD4-216ENST00000567023 DHX32Q7L7V1 743 aaKnown RBP16.4■□□□□ 0.22
COMMD4-216ENST00000567023 TEX2Q8IWB9 1127 aa16.4■□□□□ 0.22
COMMD4-216ENST00000567023 RTEL1Q9NZ71 1219 aa16.4■□□□□ 0.22
COMMD4-216ENST00000567023 NOP56O00567 594 aaKnown RBP16.39■□□□□ 0.21
COMMD4-216ENST00000567023 SORBS3O60504 671 aa16.39■□□□□ 0.21
COMMD4-216ENST00000567023 CDC45O75419 566 aa16.39■□□□□ 0.21
COMMD4-216ENST00000567023 LGALS2P05162 132 aa16.39■□□□□ 0.21
COMMD4-216ENST00000567023 CENPBP07199 599 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-216ENST00000567023 MYOGP15173 224 aa16.39■□□□□ 0.21
COMMD4-216ENST00000567023 ADGRE1Q14246 886 aa16.39■□□□□ 0.21
COMMD4-216ENST00000567023 PPP2R2DQ66LE6 453 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms