RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 ARFGAP2Q8N6H7 521 aa17.3■□□□□ 0.36
COMMD4-215ENST00000566843 SCN7AQ01118 1682 aa17.29■□□□□ 0.36
COMMD4-215ENST00000566843 THSD7AQ9UPZ6 1657 aa17.29■□□□□ 0.36
COMMD4-215ENST00000566843 PVALEFA0A1B0GWK0 134 aa17.29■□□□□ 0.36
COMMD4-215ENST00000566843 GYG1P46976 350 aa17.29■□□□□ 0.36
COMMD4-215ENST00000566843 GUCY2FP51841 1108 aa17.29■□□□□ 0.36
COMMD4-215ENST00000566843 SEC24CP53992 1094 aa17.29■□□□□ 0.36
COMMD4-215ENST00000566843 SLC35G1Q2M3R5 365 aa17.29■□□□□ 0.36
COMMD4-215ENST00000566843 DGKHQ86XP1 1220 aa17.29■□□□□ 0.36
COMMD4-215ENST00000566843 STAG2Q8N3U4 1231 aa17.29■□□□□ 0.36
COMMD4-215ENST00000566843 GUF1Q8N442 669 aaKnown RBP17.29■□□□□ 0.36
COMMD4-215ENST00000566843 HPS3Q969F9 1004 aa17.29■□□□□ 0.36
COMMD4-215ENST00000566843 ZKSCAN4Q969J2 545 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-215ENST00000566843 KRT12Q99456 494 aa17.29■□□□□ 0.36
COMMD4-215ENST00000566843 MMTAG2Q9BU76 263 aaKnown RBP17.29■□□□□ 0.36
COMMD4-215ENST00000566843 NUCKS1Q9H1E3 243 aaKnown RBP17.29■□□□□ 0.36
COMMD4-215ENST00000566843 KLC4Q9NSK0 619 aa17.29■□□□□ 0.36
COMMD4-215ENST00000566843 BARHL2Q9NY43 387 aa17.29■□□□□ 0.36
COMMD4-215ENST00000566843 TMEM59LQ9UK28 342 aa17.29■□□□□ 0.36
COMMD4-215ENST00000566843 PCDHGC5Q9Y5F6 944 aa17.29■□□□□ 0.36
COMMD4-215ENST00000566843 BHMG1C9JSJ3 638 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-215ENST00000566843 CES2O00748 559 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 C21orf2O43822 256 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 PALMO75781 387 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 CCDC172P0C7W6 258 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 NT5C2P49902 561 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 LRRC63Q05C16 580 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 CCDC40Q4G0X9 1142 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 LRRC55Q6ZSA7 311 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 UNC13DQ70J99 1090 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 CCDC13Q8IYE1 715 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 ACTR5Q9H9F9 607 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-215ENST00000566843 SLC39A2Q9NP94 309 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 ATP8A2Q9NTI2 1148 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 PLAAQ9Y263 795 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 TSPY2A6NKD2 308 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 KCNMA1Q12791 1236 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 PREPLQ4J6C6 727 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-215ENST00000566843 RNF187Q5TA31 235 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-215ENST00000566843 JPH2Q9BR39 696 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-215ENST00000566843 CRNKL1Q9BZJ0 848 aaKnown RBP17.28■□□□□ 0.36
COMMD4-215ENST00000566843 ISCUQ9H1K1 167 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 ARPP21Q9UBL0 812 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-215ENST00000566843 MAD2L2Q9UI95 211 aa17.28■□□□□ 0.36
COMMD4-215ENST00000566843 H0YGN5 161 aa17.27■□□□□ 0.36
COMMD4-215ENST00000566843 ONECUT3O60422 494 aaPredicted RBP17.27■□□□□ 0.36
COMMD4-215ENST00000566843 SERPING1P05155 500 aa17.27■□□□□ 0.36
COMMD4-215ENST00000566843 CYP2D6P10635 497 aa17.27■□□□□ 0.36
COMMD4-215ENST00000566843 UBE4AQ14139 1066 aa17.27■□□□□ 0.36
COMMD4-215ENST00000566843 SLC9C1Q4G0N8 1177 aa17.27■□□□□ 0.36
COMMD4-215ENST00000566843 CYFIP2Q96F07 1278 aa17.27■□□□□ 0.36
COMMD4-215ENST00000566843 TAF1DQ9H5J8 278 aaPredicted RBP17.27■□□□□ 0.36
COMMD4-215ENST00000566843 POLD4Q9HCU8 107 aa17.27■□□□□ 0.36
COMMD4-215ENST00000566843 LUC7LQ9NQ29 371 aaKnown RBP17.27■□□□□ 0.36
COMMD4-215ENST00000566843 CEP72Q9P209 647 aa17.27■□□□□ 0.36
COMMD4-215ENST00000566843 NFS1Q9Y697 457 aa17.27■□□□□ 0.36
COMMD4-215ENST00000566843 COL4A1P02462 1669 aa17.27■□□□□ 0.36
COMMD4-215ENST00000566843 RAD51CO43502 376 aa17.27■□□□□ 0.35
COMMD4-215ENST00000566843 TLR2O60603 784 aa17.27■□□□□ 0.35
COMMD4-215ENST00000566843 TNNC1P63316 161 aa17.27■□□□□ 0.35
COMMD4-215ENST00000566843 IFT88Q13099 833 aa17.27■□□□□ 0.35
COMMD4-215ENST00000566843 CEP85LQ5SZL2 805 aa17.27■□□□□ 0.35
COMMD4-215ENST00000566843 CACNA2D4Q7Z3S7 1137 aa17.27■□□□□ 0.35
COMMD4-215ENST00000566843 KRT25Q7Z3Z0 450 aa17.27■□□□□ 0.35
COMMD4-215ENST00000566843 USP38Q8NB14 1042 aa17.27■□□□□ 0.35
COMMD4-215ENST00000566843 PNMA1Q8ND90 353 aa17.27■□□□□ 0.35
COMMD4-215ENST00000566843 NSUN4Q96CB9 384 aaKnown RBP17.27■□□□□ 0.35
COMMD4-215ENST00000566843 SLC40A1Q9NP59 571 aa17.27■□□□□ 0.35
COMMD4-215ENST00000566843 DONSONQ9NYP3 566 aa17.27■□□□□ 0.35
COMMD4-215ENST00000566843 E7EVH7 732 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 TRADDQ15628 312 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 PARP10Q53GL7 1025 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 WLSQ5T9L3 541 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 SV2BQ7L1I2 683 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 TMC4Q7Z404 712 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 CD248Q9HCU0 757 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 IL17RBQ9NRM6 502 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 BLOC1S4Q9NUP1 217 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 SLC12A6Q9UHW9 1150 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 MCM8Q9UJA3 840 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 MYMKA6NI61 221 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 CYTH3O43739 400 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 NOL4O94818 638 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 FTCDO95954 541 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 ECHS1P30084 290 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 ORC2Q13416 577 aaPredicted RBP17.26■□□□□ 0.35
COMMD4-215ENST00000566843 SFMBT2Q5VUG0 894 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 MAATS1Q7Z4T9 603 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 CALML4Q96GE6 196 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 ZMYND12Q9H0C1 365 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 STK17AQ9UEE5 414 aa17.26■□□□□ 0.35
COMMD4-215ENST00000566843 GMNCA6NCL1 334 aa17.25■□□□□ 0.35
COMMD4-215ENST00000566843 C5orf60A6NFR6 353 aa17.25■□□□□ 0.35
COMMD4-215ENST00000566843 KLRC1P26715 233 aa17.25■□□□□ 0.35
COMMD4-215ENST00000566843 PSEN1P49768 467 aa17.25■□□□□ 0.35
COMMD4-215ENST00000566843 GRB10Q13322 594 aa17.25■□□□□ 0.35
COMMD4-215ENST00000566843 CUL1Q13616 776 aa17.25■□□□□ 0.35
COMMD4-215ENST00000566843 TDRD12Q587J7 1177 aaKnown RBP17.25■□□□□ 0.35
COMMD4-215ENST00000566843 HEATR3Q7Z4Q2 680 aa17.25■□□□□ 0.35
COMMD4-215ENST00000566843 RIC8AQ9NPQ8 531 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms