RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 HPSEQ9Y251 543 aa10.58□□□□□ -0.72
CNEP1R1-206ENST00000565556 PASKQ96RG2 1323 aa10.58□□□□□ -0.72
CNEP1R1-206ENST00000565556 CCL15-CCL14A0A0B4J2E2 113 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 KIF3CO14782 793 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 EDIL3O43854 480 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 TDP2O95551 362 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 SFPQP23246 707 aaKnown RBP eCLIP10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 ZNF76P36508 570 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 SYKP43405 635 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 NAA30Q147X3 362 aaPredicted RBP10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 ELF2Q15723 593 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 CCL15Q16663 113 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 TMEM266Q2M3C6 531 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 KMT5BQ4FZB7 885 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 Q4G0T1 1027 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 RIOX2Q8IUF8 465 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 AK8Q96MA6 479 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 TIGD1Q96MW7 591 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 MTMR9Q96QG7 549 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 RAB34Q9BZG1 259 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 TMEM60Q9H2L4 133 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 TRMT1Q9NXH9 659 aaKnown RBP10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 KCNH3Q9ULD8 1083 aa10.57□□□□□ -0.72
CNEP1R1-206ENST00000565556 TBX3O15119 743 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 MARCH6O60337 910 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 ZNF202O95125 648 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 SMC2O95347 1197 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 SLC25A27O95847 323 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 TXLNAP40222 546 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 ZNF157P51786 506 aaPredicted RBP10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 RPS6P62753 249 aaKnown RBP10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 NSMFQ6X4W1 530 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 SAPCD2Q86UD0 394 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 SLFN12Q8IYM2 578 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 SYTL5Q8TDW5 730 aaPredicted RBP10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 CCDC34Q96HJ3 373 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 SPATC1LQ9H0A9 340 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 L2HGDHQ9H9P8 463 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 BTBD7Q9P203 1132 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 KIAA1468Q9P260 1216 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 RIPK3Q9Y572 518 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 RPTORQ8N122 1335 aa10.56□□□□□ -0.72
CNEP1R1-206ENST00000565556 BTBD19C9JJ37 291 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 PDHXO00330 501 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 PFASO15067 1338 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 SLC37A4O43826 429 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 GCLCP48506 637 aaPredicted RBP10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 FXR2P51116 673 aaKnown RBP eCLIP10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 GRIN1Q05586 938 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 BAATQ14032 418 aaPredicted RBP10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 PDIA5Q14554 519 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 IL17AQ16552 155 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 RGMBQ6NW40 437 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 XRRA1Q6P2D8 792 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 FBXO38Q6PIJ6 1188 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 BRI3BPQ8WY22 251 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 PPP1R13BQ96KQ4 1090 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 FAM20AQ96MK3 541 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 FAM53CQ9NYF3 392 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 HOOK1Q9UJC3 728 aaKnown RBP10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 FRMPD4Q14CM0 1322 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 TESPA1A2RU30 521 aaPredicted RBP10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 MANSC4A6NHS7 340 aaPredicted RBP10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 TOMM70O94826 608 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 SLFN14P0C7P3 912 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 TXKP42681 527 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 NLRP12P59046 1061 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 MKRN3Q13064 507 aaKnown RBP10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 DPCR1Q3MIW9 517 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 PRR16Q569H4 304 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 SPECC1Q5M775 1068 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 PCNX4Q63HM2 1172 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 KANK3Q6NY19 840 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 NIPA1Q7RTP0 329 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 TMC6Q7Z403 805 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 RASAL3Q86YV0 1011 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 ELOA2Q8IYF1 753 aaPredicted RBP10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 SMCR8Q8TEV9 937 aaPredicted RBP10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 SYMPKQ92797 1274 aaKnown RBP10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 CCDC102AQ96A19 550 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 PAGR1Q9BTK6 254 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 XPO4Q9C0E2 1151 aaKnown RBP10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 ZCCHC17Q9NP64 241 aaKnown RBP10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 CYP39A1Q9NYL5 469 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 IFNKQ9P0W0 207 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 RBPJLQ9UBG7 517 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 TLL2Q9Y6L7 1015 aa10.55□□□□□ -0.72
CNEP1R1-206ENST00000565556 PHLPP2Q6ZVD8 1323 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 A0A087WWV3 80 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 CCDC66A2RUB6 948 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 IKBKBO14920 756 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 CNMDO75829 334 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 UBA7P41226 1012 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 INHBEP58166 350 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 CCNA1P78396 465 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 SETQ01105 290 aaPredicted RBP10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 FSTL1Q12841 308 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 TERF2Q15554 542 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms