RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 RASEFQ8IZ41 740 aa18.08■□□□□ 0.48
CDH3-204ENST00000565453 DHX38Q92620 1227 aaKnown RBP18.08■□□□□ 0.48
CDH3-204ENST00000565453 INPP4AQ96PE3 977 aaPredicted RBP18.08■□□□□ 0.48
CDH3-204ENST00000565453 BCAS3Q9H6U6 928 aa18.08■□□□□ 0.48
CDH3-204ENST00000565453 HDAC6Q9UBN7 1215 aa18.08■□□□□ 0.48
CDH3-204ENST00000565453 SLC12A7Q9Y666 1083 aa18.08■□□□□ 0.48
CDH3-204ENST00000565453 SORBS3O60504 671 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 PPFIA4O75335 1185 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 STAM2O75886 525 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 EXOSC10Q01780 885 aaKnown RBP18.07■□□□□ 0.48
CDH3-204ENST00000565453 RBL2Q08999 1139 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 BFSP2Q13515 415 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 MFSD10Q14728 455 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 RAB30Q15771 203 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 KIAA0753Q2KHM9 967 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 RNF20Q5VTR2 975 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 DEFB128Q7Z7B8 93 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 RETREG2Q8NC44 543 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 SPATA33Q96N06 139 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 NEK1Q96PY6 1258 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 ALG1Q9BT22 464 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 KATNAL1Q9BW62 490 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 SEC63Q9UGP8 760 aaKnown RBP18.07■□□□□ 0.48
CDH3-204ENST00000565453 NOD1Q9Y239 953 aa18.07■□□□□ 0.48
CDH3-204ENST00000565453 YBX2Q9Y2T7 364 aaKnown RBP18.07■□□□□ 0.48
CDH3-204ENST00000565453 GBF1Q92538 1859 aa18.06■□□□□ 0.48
CDH3-204ENST00000565453 SPATA31C2B4DYI2 1134 aa18.06■□□□□ 0.48
CDH3-204ENST00000565453 FOSL2P15408 326 aa18.06■□□□□ 0.48
CDH3-204ENST00000565453 ADCK5Q3MIX3 580 aa18.06■□□□□ 0.48
CDH3-204ENST00000565453 FANCBQ8NB91 859 aa18.06■□□□□ 0.48
CDH3-204ENST00000565453 MAFAQ8NHW3 353 aaPredicted RBP18.06■□□□□ 0.48
CDH3-204ENST00000565453 SMARCC2Q8TAQ2 1214 aa18.06■□□□□ 0.48
CDH3-204ENST00000565453 CAGE1Q8TC20 777 aa18.06■□□□□ 0.48
CDH3-204ENST00000565453 C16orf70Q9BSU1 422 aa18.06■□□□□ 0.48
CDH3-204ENST00000565453 HIC1Q14526 733 aa18.05■□□□□ 0.48
CDH3-204ENST00000565453 GPNMBQ14956 572 aa18.05■□□□□ 0.48
CDH3-204ENST00000565453 GNPTABQ3T906 1256 aa18.05■□□□□ 0.48
CDH3-204ENST00000565453 PCNX4Q63HM2 1172 aa18.05■□□□□ 0.48
CDH3-204ENST00000565453 APOA5Q6Q788 366 aa18.05■□□□□ 0.48
CDH3-204ENST00000565453 MICU3Q86XE3 530 aa18.05■□□□□ 0.48
CDH3-204ENST00000565453 C7orf31Q8N865 590 aa18.05■□□□□ 0.48
CDH3-204ENST00000565453 AFAP1L1Q8TED9 768 aa18.05■□□□□ 0.48
CDH3-204ENST00000565453 CUL5Q93034 780 aa18.05■□□□□ 0.48
CDH3-204ENST00000565453 NKX2-4Q9H2Z4 354 aa18.05■□□□□ 0.48
CDH3-204ENST00000565453 RTEL1Q9NZ71 1219 aa18.05■□□□□ 0.48
CDH3-204ENST00000565453 MSRAQ9UJ68 235 aa18.05■□□□□ 0.48
CDH3-204ENST00000565453 SLC4A7Q9Y6M7 1214 aa18.05■□□□□ 0.48
CDH3-204ENST00000565453 hCG_1642624A0A1W2PR95 340 aa18.04■□□□□ 0.48
CDH3-204ENST00000565453 ZBBXA8MT70 800 aa18.04■□□□□ 0.48
CDH3-204ENST00000565453 FIBPO43427 364 aa18.04■□□□□ 0.48
CDH3-204ENST00000565453 RABGGTBP53611 331 aa18.04■□□□□ 0.48
CDH3-204ENST00000565453 FUT2Q10981 343 aa18.04■□□□□ 0.48
CDH3-204ENST00000565453 TRIM71Q2Q1W2 868 aaKnown RBP18.04■□□□□ 0.48
CDH3-204ENST00000565453 XRRA1Q6P2D8 792 aa18.04■□□□□ 0.48
CDH3-204ENST00000565453 DHX32Q7L7V1 743 aaKnown RBP18.04■□□□□ 0.48
CDH3-204ENST00000565453 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.04■□□□□ 0.48
CDH3-204ENST00000565453 CCDC155Q8N6L0 562 aa18.04■□□□□ 0.48
CDH3-204ENST00000565453 KCNB2Q92953 911 aa18.04■□□□□ 0.48
CDH3-204ENST00000565453 TCEANC2Q96MN5 208 aa18.04■□□□□ 0.48
CDH3-204ENST00000565453 MLXIPQ9HAP2 919 aa18.04■□□□□ 0.48
CDH3-204ENST00000565453 BRPF3Q9ULD4 1205 aa18.04■□□□□ 0.48
CDH3-204ENST00000565453 CNTNAP5Q8WYK1 1306 aa18.03■□□□□ 0.48
CDH3-204ENST00000565453 SELPP16109 830 aa18.03■□□□□ 0.48
CDH3-204ENST00000565453 ATP2A2P16615 1042 aaKnown RBP18.03■□□□□ 0.48
CDH3-204ENST00000565453 ZNF200P98182 395 aaPredicted RBP18.03■□□□□ 0.48
CDH3-204ENST00000565453 PTK7Q13308 1070 aa18.03■□□□□ 0.48
CDH3-204ENST00000565453 NEDD9Q14511 834 aa18.03■□□□□ 0.48
CDH3-204ENST00000565453 TRAF7Q6Q0C0 670 aa18.03■□□□□ 0.48
CDH3-204ENST00000565453 METTL7BQ6UX53 244 aa18.03■□□□□ 0.48
CDH3-204ENST00000565453 LRRC8DQ7L1W4 858 aa18.03■□□□□ 0.48
CDH3-204ENST00000565453 CCDC82Q8N4S0 544 aa18.03■□□□□ 0.48
CDH3-204ENST00000565453 WNT8BQ93098 351 aa18.03■□□□□ 0.48
CDH3-204ENST00000565453 PSTPIP2Q9H939 334 aa18.03■□□□□ 0.48
CDH3-204ENST00000565453 TELO2Q9Y4R8 837 aa18.03■□□□□ 0.48
CDH3-204ENST00000565453 PCDHA11Q9Y5I1 949 aa18.03■□□□□ 0.48
CDH3-204ENST00000565453 TRIP12Q14669 1992 aaPredicted RBP18.02■□□□□ 0.48
CDH3-204ENST00000565453 TET1Q8NFU7 2136 aa18.02■□□□□ 0.48
CDH3-204ENST00000565453 DLL1O00548 723 aa18.02■□□□□ 0.48
CDH3-204ENST00000565453 CXCL10P02778 98 aa18.02■□□□□ 0.48
CDH3-204ENST00000565453 LGALS2P05162 132 aa18.02■□□□□ 0.48
CDH3-204ENST00000565453 CKBP12277 381 aa18.02■□□□□ 0.48
CDH3-204ENST00000565453 ACTN1P12814 892 aa18.02■□□□□ 0.48
CDH3-204ENST00000565453 HOXC8P31273 242 aa18.02■□□□□ 0.48
CDH3-204ENST00000565453 UBE2SQ16763 222 aa18.02■□□□□ 0.48
CDH3-204ENST00000565453 CYFIP1Q7L576 1253 aa18.02■□□□□ 0.48
CDH3-204ENST00000565453 GPR20Q99678 358 aa18.02■□□□□ 0.48
CDH3-204ENST00000565453 SENP7Q9BQF6 1050 aa18.02■□□□□ 0.48
CDH3-204ENST00000565453 CDH23Q9H251 3354 aa18.02■□□□□ 0.48
CDH3-204ENST00000565453 PRDM12Q9H4Q4 367 aa18.02■□□□□ 0.48
CDH3-204ENST00000565453 RBM28Q9NW13 759 aaKnown RBP18.02■□□□□ 0.48
CDH3-204ENST00000565453 DOCK5Q9H7D0 1870 aa18.01■□□□□ 0.47
CDH3-204ENST00000565453 NBNO60934 754 aa18.01■□□□□ 0.47
CDH3-204ENST00000565453 MYOGP15173 224 aa18.01■□□□□ 0.47
CDH3-204ENST00000565453 KRT32Q14532 448 aa18.01■□□□□ 0.47
CDH3-204ENST00000565453 SYNE3Q6ZMZ3 975 aa18.01■□□□□ 0.47
CDH3-204ENST00000565453 PHOSPHO2Q8TCD6 241 aa18.01■□□□□ 0.47
CDH3-204ENST00000565453 CCDC136Q96JN2 1154 aa18.01■□□□□ 0.47
CDH3-204ENST00000565453 FTOQ9C0B1 505 aaKnown RBP eCLIP18.01■□□□□ 0.47
CDH3-204ENST00000565453 FAM217BQ9NTX9 383 aaPredicted RBP18.01■□□□□ 0.47
CDH3-204ENST00000565453 H3BRB1 525 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms