RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 WNT8BQ93098 351 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 PIGSQ96S52 555 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 BCAS3Q9H6U6 928 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 CERS4Q9HA82 394 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 SUPT16HQ9Y5B9 1047 aaKnown RBP9.97□□□□□ -0.81
CAPN3-213ENST00000565173 MTCH2Q9Y6C9 303 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 U3KPZ7 1027 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-213ENST00000565173 MYH6P13533 1939 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 PTPRSQ13332 1948 aa9.96□□□□□ -0.81
CAPN3-213ENST00000565173 PNMA6FA0A0J9YX94 578 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 TNFRSF10AO00220 468 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 IFIT3O14879 490 aaKnown RBP9.96□□□□□ -0.82
CAPN3-213ENST00000565173 SGSM2O43147 1006 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 ZNF286BP0CG31 522 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 TGFB3P10600 412 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 ANTXR2P58335 489 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 WDR5P61964 334 aaKnown RBP9.96□□□□□ -0.82
CAPN3-213ENST00000565173 TRDNQ13061 729 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 PTK7Q13308 1070 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 MBTPS1Q14703 1052 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 KCNV1Q6PIU1 500 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 LRRC8DQ7L1W4 858 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 TMCO2Q7Z6W1 182 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-213ENST00000565173 HOMER1Q86YM7 354 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 CCDC155Q8N6L0 562 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 C7orf31Q8N865 590 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 MAP4K1Q92918 833 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 ZFP91Q96JP5 570 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-213ENST00000565173 C16orf70Q9BSU1 422 aa9.96□□□□□ -0.82
CAPN3-213ENST00000565173 MYH7BA7E2Y1 1941 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 LCHNA4D1U4 455 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 GCOM1H8Y6P7 765 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-213ENST00000565173 SORBS3O60504 671 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 LPXNO60711 386 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 PARNO95453 639 aaKnown RBP9.95□□□□□ -0.82
CAPN3-213ENST00000565173 GGPS1O95749 300 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 POLR2MP0CAP2 368 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 BMP1P13497 986 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 UBA1P22314 1058 aaKnown RBP9.95□□□□□ -0.82
CAPN3-213ENST00000565173 CCND2P30279 289 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 HOXC8P31273 242 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 DEFB103AP81534 67 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 MRPS9P82933 396 aaKnown RBP9.95□□□□□ -0.82
CAPN3-213ENST00000565173 TFF2Q03403 129 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 MKRN4PQ13434 485 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-213ENST00000565173 COL9A3Q14050 684 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-213ENST00000565173 ZNF618Q5T7W0 954 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 KRT40Q6A162 431 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 CNKSR3Q6P9H4 555 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 MB21D2Q8IYB1 491 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-213ENST00000565173 NCOA7Q8NI08 942 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 RUFY2Q8WXA3 655 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 ARNTL2Q8WYA1 636 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 SPATA33Q96N06 139 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 ALG1Q9BT22 464 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 KATNAL1Q9BW62 490 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 FRMPD4Q14CM0 1322 aa9.95□□□□□ -0.82
CAPN3-213ENST00000565173 PRRC2BQ5JSZ5 2229 aaKnown RBP9.94□□□□□ -0.82
CAPN3-213ENST00000565173 BAZ2BQ9UIF8 2168 aaKnown RBP9.94□□□□□ -0.82
CAPN3-213ENST00000565173 ABHD14A-ACY1A0A1B0GW23 586 aa9.94□□□□□ -0.82
CAPN3-213ENST00000565173 SPATA31C2B4DYI2 1134 aa9.94□□□□□ -0.82
CAPN3-213ENST00000565173 KIF28PB7ZC32 967 aa9.94□□□□□ -0.82
CAPN3-213ENST00000565173 TLL1O43897 1013 aa9.94□□□□□ -0.82
CAPN3-213ENST00000565173 ICAM3P32942 547 aa9.94□□□□□ -0.82
CAPN3-213ENST00000565173 TRAF1Q13077 416 aa9.94□□□□□ -0.82
CAPN3-213ENST00000565173 SEMA3FQ13275 785 aa9.94□□□□□ -0.82
CAPN3-213ENST00000565173 WTAPQ15007 396 aa9.94□□□□□ -0.82
CAPN3-213ENST00000565173 SERINC5Q86VE9 423 aa9.94□□□□□ -0.82
CAPN3-213ENST00000565173 FCHSD1Q86WN1 690 aa9.94□□□□□ -0.82
CAPN3-213ENST00000565173 MICALL1Q8N3F8 863 aa9.94□□□□□ -0.82
CAPN3-213ENST00000565173 ADAMTS19Q8TE59 1207 aa9.94□□□□□ -0.82
CAPN3-213ENST00000565173 INPP4AQ96PE3 977 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-213ENST00000565173 MAP3K14Q99558 947 aa9.94□□□□□ -0.82
CAPN3-213ENST00000565173 LY9Q9HBG7 655 aa9.94□□□□□ -0.82
CAPN3-213ENST00000565173 TELO2Q9Y4R8 837 aa9.94□□□□□ -0.82
CAPN3-213ENST00000565173 ERICH2A1L162 156 aa9.93□□□□□ -0.82
CAPN3-213ENST00000565173 H3BRB1 525 aa9.93□□□□□ -0.82
CAPN3-213ENST00000565173 GJB5O95377 273 aa9.93□□□□□ -0.82
CAPN3-213ENST00000565173 GRB10Q13322 594 aa9.93□□□□□ -0.82
CAPN3-213ENST00000565173 SART3Q15020 963 aaKnown RBP9.93□□□□□ -0.82
CAPN3-213ENST00000565173 CATIPQ7Z7H3 387 aa9.93□□□□□ -0.82
CAPN3-213ENST00000565173 RALYLQ86SE5 291 aaKnown RBP9.93□□□□□ -0.82
CAPN3-213ENST00000565173 UHRF1Q96T88 793 aaPredicted RBP9.93□□□□□ -0.82
CAPN3-213ENST00000565173 RAD9AQ99638 391 aa9.93□□□□□ -0.82
CAPN3-213ENST00000565173 OSBPL7Q9BZF2 842 aa9.93□□□□□ -0.82
CAPN3-213ENST00000565173 TUT1Q9H6E5 874 aaKnown RBP9.93□□□□□ -0.82
CAPN3-213ENST00000565173 MLXIPQ9HAP2 919 aa9.93□□□□□ -0.82
CAPN3-213ENST00000565173 RTEL1Q9NZ71 1219 aa9.93□□□□□ -0.82
CAPN3-213ENST00000565173 RBM8AQ9Y5S9 174 aaKnown RBP9.93□□□□□ -0.82
CAPN3-213ENST00000565173 MEIS2O14770 477 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 GTPBP6O43824 516 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-213ENST00000565173 EFCAB14O75071 495 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 LGR5O75473 907 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 STAM2O75886 525 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 LGALS2P05162 132 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 SMIM10L2AP0DMW4 78 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 SMIM10L2BP0DMW5 78 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 SMARCA1P28370 1054 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 THPOP40225 353 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 KCNJ6P48051 423 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms