RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 RNF214Q8ND24 703 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 SMC1BQ8NDV3 1235 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 SMCR8Q8TEV9 937 aaPredicted RBP12.66□□□□□ -0.38
SNX29-204ENST00000564791 SLC5A5Q92911 643 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 CCDC34Q96HJ3 373 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 PNMA5Q96PV4 448 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 PTPN18Q99952 460 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 NUDT12Q9BQG2 462 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 TUBE1Q9UJT0 475 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 VAV3Q9UKW4 847 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 PLXNB2O15031 1838 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 LRRC37A2A6NM11 1700 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 BIN1O00499 593 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 BCRP11274 1271 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 CCND2P30279 289 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 COPB2P35606 906 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 CNTN2Q02246 1040 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 ANO6Q4KMQ2 910 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 NCAPH2Q6IBW4 605 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 XRRA1Q6P2D8 792 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 NSUN6Q8TEA1 469 aaKnown RBP12.66□□□□□ -0.38
SNX29-204ENST00000564791 STAMQ92783 540 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 CALML4Q96GE6 196 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 PCDHA5Q9Y5H7 936 aa12.66□□□□□ -0.38
SNX29-204ENST00000564791 PSMD10O75832 226 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 NR3C2P08235 984 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 SLC10A3P09131 477 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 CASP1P29466 404 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 DEKP35659 375 aaKnown RBP12.65□□□□□ -0.38
SNX29-204ENST00000564791 MRE11P49959 708 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 TMEM119Q4V9L6 283 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 L1TD1Q5T7N2 865 aaKnown RBP12.65□□□□□ -0.38
SNX29-204ENST00000564791 LRCH2Q5VUJ6 765 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 C11orf57Q6ZUT1 292 aaPredicted RBP12.65□□□□□ -0.38
SNX29-204ENST00000564791 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNX29-204ENST00000564791 VSIG10LQ86VR7 867 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 CDK5RAP3Q96JB5 506 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 MTRQ99707 1265 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 ZNF577Q9BSK1 485 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 WDR11Q9BZH6 1224 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 DNAJC25Q9H1X3 360 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 JADE2Q9NQC1 790 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 TLL2Q9Y6L7 1015 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 ASTN1O14525 1302 aa12.65□□□□□ -0.38
SNX29-204ENST00000564791 TESPA1A2RU30 521 aaPredicted RBP12.64□□□□□ -0.39
SNX29-204ENST00000564791 POTEB2H3BUK9 544 aa12.64□□□□□ -0.39
SNX29-204ENST00000564791 GAS7O60861 476 aa12.64□□□□□ -0.39
SNX29-204ENST00000564791 CCT6AP40227 531 aaKnown RBP12.64□□□□□ -0.39
SNX29-204ENST00000564791 DPYDQ12882 1025 aa12.64□□□□□ -0.39
SNX29-204ENST00000564791 ECM1Q16610 540 aa12.64□□□□□ -0.39
SNX29-204ENST00000564791 ANKRD13CQ8N6S4 541 aa12.64□□□□□ -0.39
SNX29-204ENST00000564791 SHCBP1Q8NEM2 672 aa12.64□□□□□ -0.39
SNX29-204ENST00000564791 GPRC5AQ8NFJ5 357 aa12.64□□□□□ -0.39
SNX29-204ENST00000564791 SMARCE1Q969G3 411 aa12.64□□□□□ -0.39
SNX29-204ENST00000564791 PARK7Q99497 189 aaKnown RBP12.64□□□□□ -0.39
SNX29-204ENST00000564791 CUEDC2Q9H467 287 aa12.64□□□□□ -0.39
SNX29-204ENST00000564791 MAGEF1Q9HAY2 307 aa12.64□□□□□ -0.39
SNX29-204ENST00000564791 AGO4Q9HCK5 861 aaKnown RBP12.64□□□□□ -0.39
SNX29-204ENST00000564791 KCNH7Q9NS40 1196 aa12.64□□□□□ -0.39
SNX29-204ENST00000564791 ANO10Q9NW15 660 aa12.64□□□□□ -0.39
SNX29-204ENST00000564791 PKD2L1Q9P0L9 805 aa12.64□□□□□ -0.39
SNX29-204ENST00000564791 DOCK5Q9H7D0 1870 aa12.64□□□□□ -0.39
SNX29-204ENST00000564791 KDM3AQ9Y4C1 1321 aa12.64□□□□□ -0.39
SNX29-204ENST00000564791 PLXNA1Q9UIW2 1896 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 MANSC4A6NHS7 340 aaPredicted RBP12.63□□□□□ -0.39
SNX29-204ENST00000564791 IPO5O00410 1097 aaKnown RBP12.63□□□□□ -0.39
SNX29-204ENST00000564791 EML1O00423 815 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 GTPBP6O43824 516 aaPredicted RBP12.63□□□□□ -0.39
SNX29-204ENST00000564791 GCLCP48506 637 aaPredicted RBP12.63□□□□□ -0.39
SNX29-204ENST00000564791 NLRP12P59046 1061 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 PPP2R5CQ13362 524 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 MTMR1Q13613 665 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 HYIQ5T013 277 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 NT5DC1Q5TFE4 455 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 WDR78Q5VTH9 848 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 ISM2Q6H9L7 571 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 OTOP1Q7RTM1 612 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 FAM133AQ8N9E0 248 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 DNERQ8NFT8 737 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 ERMNQ8TAM6 284 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 SPATA20Q8TB22 786 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 MMP19Q99542 508 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 TEKT3Q9BXF9 490 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 PORCNQ9H237 461 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 BLZF1Q9H2G9 400 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 MROH8Q9H579 483 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 EFCC1Q9HA90 598 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 BLOC1S4Q9NUP1 217 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 KBTBD4Q9NVX7 518 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 MORF4L1Q9UBU8 362 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 MAN1B1Q9UKM7 699 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 ABT1Q9ULW3 272 aaKnown RBP12.63□□□□□ -0.39
SNX29-204ENST00000564791 MCM3APO60318 1980 aa12.63□□□□□ -0.39
SNX29-204ENST00000564791 POTEB3A0JP26 581 aa12.62□□□□□ -0.39
SNX29-204ENST00000564791 SOWAHBA6NEL2 793 aa12.62□□□□□ -0.39
SNX29-204ENST00000564791 IGF2BP3O00425 579 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNX29-204ENST00000564791 SLC26A4O43511 780 aa12.62□□□□□ -0.39
SNX29-204ENST00000564791 CHMP2AO43633 222 aa12.62□□□□□ -0.39
SNX29-204ENST00000564791 MED24O75448 989 aa12.62□□□□□ -0.39
SNX29-204ENST00000564791 SMC2O95347 1197 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms