RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 LMCD1Q9NZU5 365 aa16.41■□□□□ 0.22
CDR2-204ENST00000564542 CTNNA3Q9UI47 895 aa16.41■□□□□ 0.22
CDR2-204ENST00000564542 NUCB1Q02818 461 aa16.4■□□□□ 0.22
CDR2-204ENST00000564542 TCTN1Q2MV58 587 aa16.4■□□□□ 0.22
CDR2-204ENST00000564542 IFIT1BQ5T764 474 aaKnown RBP16.4■□□□□ 0.22
CDR2-204ENST00000564542 KCNV1Q6PIU1 500 aa16.4■□□□□ 0.22
CDR2-204ENST00000564542 TRAF7Q6Q0C0 670 aa16.4■□□□□ 0.22
CDR2-204ENST00000564542 STOX1Q6ZVD7 989 aa16.4■□□□□ 0.22
CDR2-204ENST00000564542 STAG2Q8N3U4 1231 aa16.4■□□□□ 0.22
CDR2-204ENST00000564542 GDPD5Q8WTR4 605 aa16.4■□□□□ 0.22
CDR2-204ENST00000564542 MTMR8Q96EF0 704 aa16.4■□□□□ 0.22
CDR2-204ENST00000564542 RAD9AQ99638 391 aa16.4■□□□□ 0.22
CDR2-204ENST00000564542 MYH7BA7E2Y1 1941 aa16.4■□□□□ 0.22
CDR2-204ENST00000564542 ZBTB5O15062 677 aa16.39■□□□□ 0.21
CDR2-204ENST00000564542 PPP1R11O60927 126 aaPredicted RBP16.39■□□□□ 0.21
CDR2-204ENST00000564542 PPFIA4O75335 1185 aa16.39■□□□□ 0.21
CDR2-204ENST00000564542 RGS20O76081 388 aa16.39■□□□□ 0.21
CDR2-204ENST00000564542 IKBKEQ14164 716 aa16.39■□□□□ 0.21
CDR2-204ENST00000564542 CELF3Q5SZQ8 465 aaKnown RBP16.39■□□□□ 0.21
CDR2-204ENST00000564542 ZNF618Q5T7W0 954 aa16.39■□□□□ 0.21
CDR2-204ENST00000564542 MYSM1Q5VVJ2 828 aa16.39■□□□□ 0.21
CDR2-204ENST00000564542 SAMD3Q8N6K7 520 aa16.39■□□□□ 0.21
CDR2-204ENST00000564542 WNT8BQ93098 351 aa16.39■□□□□ 0.21
CDR2-204ENST00000564542 EMSYQ7Z589 1322 aa16.39■□□□□ 0.21
CDR2-204ENST00000564542 KLRF2D3W0D1 207 aa16.38■□□□□ 0.21
CDR2-204ENST00000564542 MYCLP12524 364 aaPredicted RBP16.38■□□□□ 0.21
CDR2-204ENST00000564542 PLA2G5P39877 138 aa16.38■□□□□ 0.21
CDR2-204ENST00000564542 ERVK-21P61565 698 aa16.38■□□□□ 0.21
CDR2-204ENST00000564542 MBTPS1Q14703 1052 aa16.38■□□□□ 0.21
CDR2-204ENST00000564542 PGM5Q15124 567 aa16.38■□□□□ 0.21
CDR2-204ENST00000564542 SEC23AQ15436 765 aa16.38■□□□□ 0.21
CDR2-204ENST00000564542 HSDL1Q3SXM5 330 aa16.38■□□□□ 0.21
CDR2-204ENST00000564542 VSIG10LQ86VR7 867 aa16.38■□□□□ 0.21
CDR2-204ENST00000564542 SPATA33Q96N06 139 aa16.38■□□□□ 0.21
CDR2-204ENST00000564542 TGS1Q96RS0 853 aaKnown RBP16.38■□□□□ 0.21
CDR2-204ENST00000564542 SUGCTQ9HAC7 445 aa16.38■□□□□ 0.21
CDR2-204ENST00000564542 MAD2L2Q9UI95 211 aa16.38■□□□□ 0.21
CDR2-204ENST00000564542 PCDHA1Q9Y5I3 950 aa16.38■□□□□ 0.21
CDR2-204ENST00000564542 MICAL3Q7RTP6 2002 aa16.37■□□□□ 0.21
CDR2-204ENST00000564542 LINC01553A4QN01 128 aa16.37■□□□□ 0.21
CDR2-204ENST00000564542 PALM3A6NDB9 673 aaPredicted RBP16.37■□□□□ 0.21
CDR2-204ENST00000564542 LGR5O75473 907 aa16.37■□□□□ 0.21
CDR2-204ENST00000564542 GGPS1O95749 300 aa16.37■□□□□ 0.21
CDR2-204ENST00000564542 TGFB3P10600 412 aa16.37■□□□□ 0.21
CDR2-204ENST00000564542 UBA1P22314 1058 aaKnown RBP16.37■□□□□ 0.21
CDR2-204ENST00000564542 HOXA13P31271 388 aaPredicted RBP16.37■□□□□ 0.21
CDR2-204ENST00000564542 ZNF200P98182 395 aaPredicted RBP16.37■□□□□ 0.21
CDR2-204ENST00000564542 HIC1Q14526 733 aa16.37■□□□□ 0.21
CDR2-204ENST00000564542 SERINC5Q86VE9 423 aa16.37■□□□□ 0.21
CDR2-204ENST00000564542 IL31RAQ8NI17 732 aa16.37■□□□□ 0.21
CDR2-204ENST00000564542 MTUS1Q9ULD2 1270 aa16.37■□□□□ 0.21
CDR2-204ENST00000564542 SORBS3O60504 671 aa16.36■□□□□ 0.21
CDR2-204ENST00000564542 IGHDP01880 384 aa16.36■□□□□ 0.21
CDR2-204ENST00000564542 CCND2P30279 289 aa16.36■□□□□ 0.21
CDR2-204ENST00000564542 SP2Q02086 613 aa16.36■□□□□ 0.21
CDR2-204ENST00000564542 TRAF1Q13077 416 aa16.36■□□□□ 0.21
CDR2-204ENST00000564542 MKRN4PQ13434 485 aaPredicted RBP16.36■□□□□ 0.21
CDR2-204ENST00000564542 C16orf70Q9BSU1 422 aa16.36■□□□□ 0.21
CDR2-204ENST00000564542 COL4A6Q14031 1691 aa16.35■□□□□ 0.21
CDR2-204ENST00000564542 GCOM1H8Y6P7 765 aaPredicted RBP16.35■□□□□ 0.21
CDR2-204ENST00000564542 POLR2MP0CAP2 368 aa16.35■□□□□ 0.21
CDR2-204ENST00000564542 HOXC8P31273 242 aa16.35■□□□□ 0.21
CDR2-204ENST00000564542 THPOP40225 353 aa16.35■□□□□ 0.21
CDR2-204ENST00000564542 GRM4Q14833 912 aa16.35■□□□□ 0.21
CDR2-204ENST00000564542 CYB5R4Q7L1T6 521 aa16.35■□□□□ 0.21
CDR2-204ENST00000564542 HOMER1Q86YM7 354 aa16.35■□□□□ 0.21
CDR2-204ENST00000564542 IL25Q9H293 177 aa16.35■□□□□ 0.21
CDR2-204ENST00000564542 EPHX3Q9H6B9 360 aa16.35■□□□□ 0.21
CDR2-204ENST00000564542 INSL6Q9Y581 213 aa16.35■□□□□ 0.21
CDR2-204ENST00000564542 C17orf102A2RUQ5 167 aa16.34■□□□□ 0.21
CDR2-204ENST00000564542 RSPH10B2B2RC85 870 aa16.34■□□□□ 0.21
CDR2-204ENST00000564542 AMHP03971 560 aa16.34■□□□□ 0.21
CDR2-204ENST00000564542 RSPH10BP0C881 870 aa16.34■□□□□ 0.21
CDR2-204ENST00000564542 SLC35G1Q2M3R5 365 aa16.34■□□□□ 0.21
CDR2-204ENST00000564542 FAM117BQ6P1L5 589 aa16.34■□□□□ 0.21
CDR2-204ENST00000564542 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.34■□□□□ 0.21
CDR2-204ENST00000564542 DBF4BQ8NFT6 615 aa16.34■□□□□ 0.21
CDR2-204ENST00000564542 GPKOWQ92917 476 aaPredicted RBP eCLIP16.34■□□□□ 0.21
CDR2-204ENST00000564542 ATP6V0A1Q93050 837 aa16.34■□□□□ 0.21
CDR2-204ENST00000564542 FAM122AQ96E09 287 aa16.34■□□□□ 0.21
CDR2-204ENST00000564542 PIGSQ96S52 555 aa16.34■□□□□ 0.21
CDR2-204ENST00000564542 RIOX1Q9H6W3 641 aa16.34■□□□□ 0.21
CDR2-204ENST00000564542 MLXIPQ9HAP2 919 aa16.34■□□□□ 0.21
CDR2-204ENST00000564542 FRMPD4Q14CM0 1322 aa16.34■□□□□ 0.21
CDR2-204ENST00000564542 BRWD1Q9NSI6 2320 aa16.34■□□□□ 0.21
CDR2-204ENST00000564542 H3BRB1 525 aa16.33■□□□□ 0.2
CDR2-204ENST00000564542 CAND2O75155 1236 aa16.33■□□□□ 0.2
CDR2-204ENST00000564542 LGALS2P05162 132 aa16.33■□□□□ 0.2
CDR2-204ENST00000564542 SMIM10L2AP0DMW4 78 aa16.33■□□□□ 0.2
CDR2-204ENST00000564542 SMIM10L2BP0DMW5 78 aa16.33■□□□□ 0.2
CDR2-204ENST00000564542 HTRA4P83105 476 aaPredicted RBP16.33■□□□□ 0.2
CDR2-204ENST00000564542 TRDNQ13061 729 aa16.33■□□□□ 0.2
CDR2-204ENST00000564542 GNPTABQ3T906 1256 aa16.33■□□□□ 0.2
CDR2-204ENST00000564542 PLEKHG4Q58EX7 1191 aa16.33■□□□□ 0.2
CDR2-204ENST00000564542 FCHSD1Q86WN1 690 aa16.33■□□□□ 0.2
CDR2-204ENST00000564542 MYOCDQ8IZQ8 938 aa16.33■□□□□ 0.2
CDR2-204ENST00000564542 FBXO22Q8NEZ5 403 aa16.33■□□□□ 0.2
CDR2-204ENST00000564542 SP7Q8TDD2 431 aaPredicted RBP16.33■□□□□ 0.2
CDR2-204ENST00000564542 C17orf80Q9BSJ5 609 aa16.33■□□□□ 0.2
CDR2-204ENST00000564542 TUT1Q9H6E5 874 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms