RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 MYLIPQ8WY64 445 aa29.04■■■□□ 2.24
SPG7-208ENST00000563783 MYL10Q9BUA6 226 aa29.04■■■□□ 2.24
SPG7-208ENST00000563783 SLC12A7Q9Y666 1083 aa29.04■■■□□ 2.24
SPG7-208ENST00000563783 UNC80Q8N2C7 3258 aa29.03■■■□□ 2.24
SPG7-208ENST00000563783 GGPS1O95749 300 aa29.03■■■□□ 2.24
SPG7-208ENST00000563783 FOSL2P15408 326 aa29.03■■■□□ 2.24
SPG7-208ENST00000563783 PSEN2P49810 448 aa29.03■■■□□ 2.24
SPG7-208ENST00000563783 SPATA33Q96N06 139 aa29.03■■■□□ 2.24
SPG7-208ENST00000563783 CTAGE1Q96RT6 745 aa29.03■■■□□ 2.24
SPG7-208ENST00000563783 CDC45O75419 566 aa29.02■■■□□ 2.24
SPG7-208ENST00000563783 MFSD10Q14728 455 aa29.02■■■□□ 2.24
SPG7-208ENST00000563783 GRIN2CQ14957 1233 aa29.02■■■□□ 2.24
SPG7-208ENST00000563783 PCNX4Q63HM2 1172 aa29.02■■■□□ 2.24
SPG7-208ENST00000563783 GDF6Q6KF10 455 aaPredicted RBP29.02■■■□□ 2.24
SPG7-208ENST00000563783 SRBD1Q8N5C6 995 aaKnown RBP29.02■■■□□ 2.24
SPG7-208ENST00000563783 C7orf31Q8N865 590 aa29.02■■■□□ 2.24
SPG7-208ENST00000563783 GRXCR1A8MXD5 290 aa29.01■■■□□ 2.23
SPG7-208ENST00000563783 MRPS9P82933 396 aaKnown RBP29.01■■■□□ 2.23
SPG7-208ENST00000563783 NEDD9Q14511 834 aa29.01■■■□□ 2.23
SPG7-208ENST00000563783 KIAA0753Q2KHM9 967 aa29.01■■■□□ 2.23
SPG7-208ENST00000563783 FANCBQ8NB91 859 aa29.01■■■□□ 2.23
SPG7-208ENST00000563783 SMARCC2Q8TAQ2 1214 aa29.01■■■□□ 2.23
SPG7-208ENST00000563783 PHOSPHO2Q8TCD6 241 aa29.01■■■□□ 2.23
SPG7-208ENST00000563783 PCDHA11Q9Y5I1 949 aa29.01■■■□□ 2.23
SPG7-208ENST00000563783 SPATA31C2B4DYI2 1134 aa29■■■□□ 2.23
SPG7-208ENST00000563783 MEIS2O14770 477 aa29■■■□□ 2.23
SPG7-208ENST00000563783 FIBPO43427 364 aa29■■■□□ 2.23
SPG7-208ENST00000563783 BAIAP3O94812 1187 aa29■■■□□ 2.23
SPG7-208ENST00000563783 PLEKHA8P1O95397 391 aa29■■■□□ 2.23
SPG7-208ENST00000563783 PBX2P40425 430 aa29■■■□□ 2.23
SPG7-208ENST00000563783 SP2Q02086 613 aa29■■■□□ 2.23
SPG7-208ENST00000563783 KRT32Q14532 448 aa29■■■□□ 2.23
SPG7-208ENST00000563783 HSDL1Q3SXM5 330 aa29■■■□□ 2.23
SPG7-208ENST00000563783 TMTC3Q6ZXV5 915 aa29■■■□□ 2.23
SPG7-208ENST00000563783 PHF6Q8IWS0 365 aaKnown RBP eCLIP29■■■□□ 2.23
SPG7-208ENST00000563783 NEK1Q96PY6 1258 aa29■■■□□ 2.23
SPG7-208ENST00000563783 SENP7Q9BQF6 1050 aa29■■■□□ 2.23
SPG7-208ENST00000563783 HDAC6Q9UBN7 1215 aa29■■■□□ 2.23
SPG7-208ENST00000563783 SELPP16109 830 aa28.99■■■□□ 2.23
SPG7-208ENST00000563783 RCAN1P53805 252 aa28.99■■■□□ 2.23
SPG7-208ENST00000563783 PTK7Q13308 1070 aa28.99■■■□□ 2.23
SPG7-208ENST00000563783 METTL7BQ6UX53 244 aa28.99■■■□□ 2.23
SPG7-208ENST00000563783 SYNE3Q6ZMZ3 975 aa28.99■■■□□ 2.23
SPG7-208ENST00000563783 SLC9A7Q96T83 725 aa28.99■■■□□ 2.23
SPG7-208ENST00000563783 MLXIPQ9HAP2 919 aa28.99■■■□□ 2.23
SPG7-208ENST00000563783 CHD7Q9P2D1 2997 aa28.99■■■□□ 2.23
SPG7-208ENST00000563783 DOCK5Q9H7D0 1870 aa28.99■■■□□ 2.23
SPG7-208ENST00000563783 TRANK1O15050 2925 aa28.99■■■□□ 2.23
SPG7-208ENST00000563783 KAT6AQ92794 2004 aa28.98■■■□□ 2.23
SPG7-208ENST00000563783 ZNF286BP0CG31 522 aa28.98■■■□□ 2.23
SPG7-208ENST00000563783 ATP2A2P16615 1042 aaKnown RBP28.98■■■□□ 2.23
SPG7-208ENST00000563783 EXOSC10Q01780 885 aaKnown RBP28.98■■■□□ 2.23
SPG7-208ENST00000563783 DHX32Q7L7V1 743 aaKnown RBP28.98■■■□□ 2.23
SPG7-208ENST00000563783 C16orf70Q9BSU1 422 aa28.98■■■□□ 2.23
SPG7-208ENST00000563783 SLC28A3Q9HAS3 691 aa28.98■■■□□ 2.23
SPG7-208ENST00000563783 RBM28Q9NW13 759 aaKnown RBP28.98■■■□□ 2.23
SPG7-208ENST00000563783 PRUNE2Q8WUY3 3088 aa28.98■■■□□ 2.23
SPG7-208ENST00000563783 HMGB1P09429 215 aaKnown RBP28.97■■■□□ 2.23
SPG7-208ENST00000563783 COL9A3Q14050 684 aaPredicted RBP28.97■■■□□ 2.23
SPG7-208ENST00000563783 APOA5Q6Q788 366 aa28.97■■■□□ 2.23
SPG7-208ENST00000563783 USP17L6PQ6QN14 398 aa28.97■■■□□ 2.23
SPG7-208ENST00000563783 DEFB128Q7Z7B8 93 aa28.97■■■□□ 2.23
SPG7-208ENST00000563783 GIMAP8Q8ND71 665 aaPredicted RBP28.97■■■□□ 2.23
SPG7-208ENST00000563783 PIBF1Q8WXW3 757 aa28.97■■■□□ 2.23
SPG7-208ENST00000563783 USP26Q9BXU7 913 aa28.97■■■□□ 2.23
SPG7-208ENST00000563783 PSTPIP2Q9H939 334 aa28.97■■■□□ 2.23
SPG7-208ENST00000563783 EYSQ5T1H1 3165 aa28.96■■■□□ 2.23
SPG7-208ENST00000563783 ZBBXA8MT70 800 aa28.96■■■□□ 2.23
SPG7-208ENST00000563783 DLL1O00548 723 aa28.96■■■□□ 2.23
SPG7-208ENST00000563783 HOXC8P31273 242 aa28.96■■■□□ 2.23
SPG7-208ENST00000563783 CHMP4BP1P59074 171 aa28.96■■■□□ 2.23
SPG7-208ENST00000563783 LRRC8DQ7L1W4 858 aa28.96■■■□□ 2.23
SPG7-208ENST00000563783 DHX38Q92620 1227 aaKnown RBP28.96■■■□□ 2.23
SPG7-208ENST00000563783 CDHR1Q96JP9 859 aa28.96■■■□□ 2.23
SPG7-208ENST00000563783 GAS2L1Q99501 681 aaPredicted RBP28.96■■■□□ 2.23
SPG7-208ENST00000563783 TTC28Q96AY4 2481 aa28.95■■■□□ 2.23
SPG7-208ENST00000563783 CXCL10P02778 98 aa28.95■■■□□ 2.22
SPG7-208ENST00000563783 NLRX1Q86UT6 975 aa28.95■■■□□ 2.22
SPG7-208ENST00000563783 PPP1R13LQ8WUF5 828 aa28.95■■■□□ 2.22
SPG7-208ENST00000563783 GPRASP2Q96D09 838 aa28.95■■■□□ 2.22
SPG7-208ENST00000563783 ALG1Q9BT22 464 aa28.95■■■□□ 2.22
SPG7-208ENST00000563783 H3BRB1 525 aa28.94■■■□□ 2.22
SPG7-208ENST00000563783 hCG_1984214I3L0E3 225 aa28.94■■■□□ 2.22
SPG7-208ENST00000563783 NOP56O00567 594 aaKnown RBP28.94■■■□□ 2.22
SPG7-208ENST00000563783 RXRAP19793 462 aa28.94■■■□□ 2.22
SPG7-208ENST00000563783 SEMA3FQ13275 785 aa28.94■■■□□ 2.22
SPG7-208ENST00000563783 MICU3Q86XE3 530 aa28.94■■■□□ 2.22
SPG7-208ENST00000563783 ZNF713Q8N859 430 aaPredicted RBP28.94■■■□□ 2.22
SPG7-208ENST00000563783 GPKOWQ92917 476 aaPredicted RBP eCLIP28.94■■■□□ 2.22
SPG7-208ENST00000563783 TUT1Q9H6E5 874 aaKnown RBP28.94■■■□□ 2.22
SPG7-208ENST00000563783 YBX2Q9Y2T7 364 aaKnown RBP28.94■■■□□ 2.22
SPG7-208ENST00000563783 LGALS2P05162 132 aa28.93■■■□□ 2.22
SPG7-208ENST00000563783 CKBP12277 381 aa28.93■■■□□ 2.22
SPG7-208ENST00000563783 TRIM71Q2Q1W2 868 aaKnown RBP28.93■■■□□ 2.22
SPG7-208ENST00000563783 PPP1R18Q6NYC8 613 aa28.93■■■□□ 2.22
SPG7-208ENST00000563783 SERINC5Q86VE9 423 aa28.93■■■□□ 2.22
SPG7-208ENST00000563783 KCNB2Q92953 911 aa28.93■■■□□ 2.22
SPG7-208ENST00000563783 LRRC2Q9BYS8 371 aa28.93■■■□□ 2.22
SPG7-208ENST00000563783 FTOQ9C0B1 505 aaKnown RBP eCLIP28.93■■■□□ 2.22
SPG7-208ENST00000563783 PTPRSQ13332 1948 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms