RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 C7orf31Q8N865 590 aa24.3■■□□□ 1.48
CHD9-208ENST00000563410 IGDCC4Q8TDY8 1250 aa24.3■■□□□ 1.48
CHD9-208ENST00000563410 ATXN2LQ8WWM7 1075 aaKnown RBP24.3■■□□□ 1.48
CHD9-208ENST00000563410 GPKOWQ92917 476 aaPredicted RBP eCLIP24.3■■□□□ 1.48
CHD9-208ENST00000563410 MAP4K1Q92918 833 aa24.3■■□□□ 1.48
CHD9-208ENST00000563410 ZFP91Q96JP5 570 aaPredicted RBP24.3■■□□□ 1.48
CHD9-208ENST00000563410 KATNAL1Q9BW62 490 aa24.3■■□□□ 1.48
CHD9-208ENST00000563410 THEGQ9P2T0 379 aa24.3■■□□□ 1.48
CHD9-208ENST00000563410 GCOM1H8Y6P7 765 aaPredicted RBP24.29■■□□□ 1.48
CHD9-208ENST00000563410 SORBS3O60504 671 aa24.29■■□□□ 1.48
CHD9-208ENST00000563410 BAIAP3O94812 1187 aa24.29■■□□□ 1.48
CHD9-208ENST00000563410 GGPS1O95749 300 aa24.29■■□□□ 1.48
CHD9-208ENST00000563410 POLR2MP0CAP2 368 aa24.29■■□□□ 1.48
CHD9-208ENST00000563410 CKBP12277 381 aa24.29■■□□□ 1.48
CHD9-208ENST00000563410 TRAF1Q13077 416 aa24.29■■□□□ 1.48
CHD9-208ENST00000563410 KCNV1Q6PIU1 500 aa24.29■■□□□ 1.48
CHD9-208ENST00000563410 LRRC8DQ7L1W4 858 aa24.29■■□□□ 1.48
CHD9-208ENST00000563410 HERC6Q8IVU3 1022 aa24.29■■□□□ 1.48
CHD9-208ENST00000563410 MB21D2Q8IYB1 491 aaPredicted RBP24.29■■□□□ 1.48
CHD9-208ENST00000563410 RBAK-RBAKDNI3L0D1 243 aa24.28■■□□□ 1.48
CHD9-208ENST00000563410 RFXAPO00287 272 aa24.28■■□□□ 1.48
CHD9-208ENST00000563410 PPFIA4O75335 1185 aa24.28■■□□□ 1.48
CHD9-208ENST00000563410 CXCL10P02778 98 aa24.28■■□□□ 1.48
CHD9-208ENST00000563410 UBA1P22314 1058 aaKnown RBP24.28■■□□□ 1.48
CHD9-208ENST00000563410 CCND2P30279 289 aa24.28■■□□□ 1.48
CHD9-208ENST00000563410 HIC1Q14526 733 aa24.28■■□□□ 1.48
CHD9-208ENST00000563410 SART3Q15020 963 aaKnown RBP24.28■■□□□ 1.48
CHD9-208ENST00000563410 TRIM71Q2Q1W2 868 aaKnown RBP24.28■■□□□ 1.48
CHD9-208ENST00000563410 FCHSD1Q86WN1 690 aa24.28■■□□□ 1.48
CHD9-208ENST00000563410 WNT8BQ93098 351 aa24.28■■□□□ 1.48
CHD9-208ENST00000563410 XIRP2A4UGR9 3374 aa24.28■■□□□ 1.48
CHD9-208ENST00000563410 EPOPA6NHQ4 379 aa24.27■■□□□ 1.48
CHD9-208ENST00000563410 NBNO60934 754 aa24.27■■□□□ 1.48
CHD9-208ENST00000563410 TGFB3P10600 412 aa24.27■■□□□ 1.48
CHD9-208ENST00000563410 WDR5P61964 334 aaKnown RBP24.27■■□□□ 1.48
CHD9-208ENST00000563410 ZNF200P98182 395 aaPredicted RBP24.27■■□□□ 1.48
CHD9-208ENST00000563410 PTK7Q13308 1070 aa24.27■■□□□ 1.48
CHD9-208ENST00000563410 TCTN1Q2MV58 587 aa24.27■■□□□ 1.48
CHD9-208ENST00000563410 TRAF7Q6Q0C0 670 aa24.27■■□□□ 1.48
CHD9-208ENST00000563410 SPATA33Q96N06 139 aa24.27■■□□□ 1.48
CHD9-208ENST00000563410 BCAS3Q9H6U6 928 aa24.27■■□□□ 1.48
CHD9-208ENST00000563410 CERS4Q9HA82 394 aa24.27■■□□□ 1.48
CHD9-208ENST00000563410 FRMPD4Q14CM0 1322 aa24.27■■□□□ 1.48
CHD9-208ENST00000563410 TCF20Q9UGU0 1960 aaKnown RBP24.27■■□□□ 1.48
CHD9-208ENST00000563410 POU3F3P20264 500 aaPredicted RBP24.26■■□□□ 1.47
CHD9-208ENST00000563410 TAP1Q03518 808 aa24.26■■□□□ 1.47
CHD9-208ENST00000563410 CATIPQ7Z7H3 387 aa24.26■■□□□ 1.47
CHD9-208ENST00000563410 ASB2Q96Q27 587 aa24.26■■□□□ 1.47
CHD9-208ENST00000563410 C16orf70Q9BSU1 422 aa24.26■■□□□ 1.47
CHD9-208ENST00000563410 RBM8AQ9Y5S9 174 aaKnown RBP24.26■■□□□ 1.47
CHD9-208ENST00000563410 MICAL3Q7RTP6 2002 aa24.26■■□□□ 1.47
CHD9-208ENST00000563410 PARNO95453 639 aaKnown RBP24.25■■□□□ 1.47
CHD9-208ENST00000563410 MRPS9P82933 396 aaKnown RBP24.25■■□□□ 1.47
CHD9-208ENST00000563410 CNKSR3Q6P9H4 555 aa24.25■■□□□ 1.47
CHD9-208ENST00000563410 PIBF1Q8WXW3 757 aa24.25■■□□□ 1.47
CHD9-208ENST00000563410 LY9Q9HBG7 655 aa24.25■■□□□ 1.47
CHD9-208ENST00000563410 COL4A4P53420 1690 aaPredicted RBP24.24■■□□□ 1.47
CHD9-208ENST00000563410 KIF28PB7ZC32 967 aa24.24■■□□□ 1.47
CHD9-208ENST00000563410 KCNJ6P48051 423 aa24.24■■□□□ 1.47
CHD9-208ENST00000563410 DEFB103AP81534 67 aa24.24■■□□□ 1.47
CHD9-208ENST00000563410 MRPS5P82675 430 aaKnown RBP24.24■■□□□ 1.47
CHD9-208ENST00000563410 ZNF618Q5T7W0 954 aa24.24■■□□□ 1.47
CHD9-208ENST00000563410 SPRED2Q7Z698 418 aa24.24■■□□□ 1.47
CHD9-208ENST00000563410 TMCO2Q7Z6W1 182 aaPredicted RBP24.24■■□□□ 1.47
CHD9-208ENST00000563410 MICALL1Q8N3F8 863 aa24.24■■□□□ 1.47
CHD9-208ENST00000563410 MAP3K14Q99558 947 aa24.24■■□□□ 1.47
CHD9-208ENST00000563410 MTCH2Q9Y6C9 303 aa24.24■■□□□ 1.47
CHD9-208ENST00000563410 BDP1A6H8Y1 2624 aa24.24■■□□□ 1.47
CHD9-208ENST00000563410 KAT6AQ92794 2004 aa24.23■■□□□ 1.47
CHD9-208ENST00000563410 ICAM3P32942 547 aa24.23■■□□□ 1.47
CHD9-208ENST00000563410 SEMA3FQ13275 785 aa24.23■■□□□ 1.47
CHD9-208ENST00000563410 COL9A3Q14050 684 aaPredicted RBP24.23■■□□□ 1.47
CHD9-208ENST00000563410 MBTPS1Q14703 1052 aa24.23■■□□□ 1.47
CHD9-208ENST00000563410 ZNF654Q8IZM8 581 aa24.23■■□□□ 1.47
CHD9-208ENST00000563410 INPP4AQ96PE3 977 aaPredicted RBP24.23■■□□□ 1.47
CHD9-208ENST00000563410 MYL10Q9BUA6 226 aa24.23■■□□□ 1.47
CHD9-208ENST00000563410 SPZ1Q9BXG8 430 aa24.23■■□□□ 1.47
CHD9-208ENST00000563410 MLXIPQ9HAP2 919 aa24.23■■□□□ 1.47
CHD9-208ENST00000563410 TLL1O43897 1013 aa24.22■■□□□ 1.47
CHD9-208ENST00000563410 ARNTL2Q8WYA1 636 aa24.22■■□□□ 1.47
CHD9-208ENST00000563410 BRWD1Q9NSI6 2320 aa24.22■■□□□ 1.47
CHD9-208ENST00000563410 LCHNA4D1U4 455 aa24.21■■□□□ 1.47
CHD9-208ENST00000563410 TNFRSF10AO00220 468 aa24.21■■□□□ 1.47
CHD9-208ENST00000563410 DDAH1O94760 285 aa24.21■■□□□ 1.47
CHD9-208ENST00000563410 HOXC8P31273 242 aa24.21■■□□□ 1.47
CHD9-208ENST00000563410 KRT40Q6A162 431 aa24.21■■□□□ 1.47
CHD9-208ENST00000563410 SERINC5Q86VE9 423 aa24.21■■□□□ 1.47
CHD9-208ENST00000563410 MTA3Q9BTC8 594 aa24.21■■□□□ 1.47
CHD9-208ENST00000563410 LSG1Q9H089 658 aaKnown RBP24.21■■□□□ 1.47
CHD9-208ENST00000563410 SIP14410 1827 aa24.21■■□□□ 1.47
CHD9-208ENST00000563410 ABHD14A-ACY1A0A1B0GW23 586 aa24.2■■□□□ 1.46
CHD9-208ENST00000563410 SPATA31C2B4DYI2 1134 aa24.2■■□□□ 1.46
CHD9-208ENST00000563410 H3BRB1 525 aa24.2■■□□□ 1.46
CHD9-208ENST00000563410 STAM2O75886 525 aa24.2■■□□□ 1.46
CHD9-208ENST00000563410 LGALS2P05162 132 aa24.2■■□□□ 1.46
CHD9-208ENST00000563410 SMARCA1P28370 1054 aa24.2■■□□□ 1.46
CHD9-208ENST00000563410 GNPTABQ3T906 1256 aa24.2■■□□□ 1.46
CHD9-208ENST00000563410 USP17L6PQ6QN14 398 aa24.2■■□□□ 1.46
CHD9-208ENST00000563410 CTCFLQ8NI51 663 aaPredicted RBP24.2■■□□□ 1.46
CHD9-208ENST00000563410 TUT1Q9H6E5 874 aaKnown RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms