RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 SERPING1P05155 500 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 MRPL12P52815 198 aaKnown RBP14.47□□□□□ -0.09
USB1-207ENST00000563149 EPHB4P54760 987 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 KCNMA1Q12791 1236 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 NNTQ13423 1086 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 SLC9C1Q4G0N8 1177 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 EMBQ6PCB8 327 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 LRRC31Q6UY01 552 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 DNAJC19Q96DA6 116 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 SWAP70Q9UH65 585 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 SUGT1Q9Y2Z0 365 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 RRP15Q9Y3B9 282 aaKnown RBP14.47□□□□□ -0.09
USB1-207ENST00000563149 TAF1LQ8IZX4 1826 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 GOLGA6BA6NDN3 693 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 POTEMA6NI47 508 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 AGPSO00116 658 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 MYO1CO00159 1063 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 OPA1O60313 960 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 MYBL2P10244 700 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 GGCXP38435 758 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 COASYQ13057 564 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 FAM26FQ5R3K3 315 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 MFSD14BQ5SR56 506 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 ALS2CLQ60I27 953 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 HGSNATQ68CP4 663 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 CCDC65Q8IXS2 484 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 SMCR8Q8TEV9 937 aaPredicted RBP14.47□□□□□ -0.09
USB1-207ENST00000563149 CUL5Q93034 780 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 RBM17Q96I25 401 aaKnown RBP14.47□□□□□ -0.09
USB1-207ENST00000563149 LY75O60449 1722 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 FRMPD2Q68DX3 1309 aaPredicted RBP14.46□□□□□ -0.09
USB1-207ENST00000563149 A6NNZ2 444 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 SHOX2O60902 331 aaPredicted RBP14.46□□□□□ -0.09
USB1-207ENST00000563149 PPFIA4O75335 1185 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 BBOX1O75936 387 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 TTLL1O95922 423 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 ZNF543Q08ER8 600 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 TUBB8Q3ZCM7 444 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 CRY2Q49AN0 593 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 CCDC40Q4G0X9 1142 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 GPATCH4Q5T3I0 446 aaKnown RBP14.46□□□□□ -0.09
USB1-207ENST00000563149 SFMBT2Q5VUG0 894 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 PPP4R3CPQ6ZMV5 832 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 GBP6Q6ZN66 633 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 FAM76AQ8TAV0 307 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 CAVIN3Q969G5 261 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 NUDT12Q9BQG2 462 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 LRRC1Q9BTT6 524 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 TANGO6Q9C0B7 1094 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 RASSF4Q9H2L5 321 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 JMJD4Q9H9V9 463 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 PANK4Q9NVE7 773 aa14.46□□□□□ -0.09
USB1-207ENST00000563149 DDX25Q9UHL0 483 aaKnown RBP14.46□□□□□ -0.09
USB1-207ENST00000563149 TRAF5O00463 557 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 ADRA2BP18089 450 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 CFAP221Q4G0U5 840 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 KLHDC7AQ5VTJ3 777 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 KCNK18Q7Z418 384 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 ZC3H3Q8IXZ2 948 aaKnown RBP14.45□□□□□ -0.1
USB1-207ENST00000563149 SH3GL2Q99962 352 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 STIM2Q9P246 746 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 PCDHA12Q9UN75 941 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 ATAD5Q96QE3 1844 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 GRID2IPA4D2P6 1211 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 MARCH6O60337 910 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 ZMYND10O75800 440 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 EPB41P11171 864 aaKnown RBP14.45□□□□□ -0.1
USB1-207ENST00000563149 TNNI2P48788 182 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 PPFIA1Q13136 1202 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 TDRD12Q587J7 1177 aaKnown RBP14.45□□□□□ -0.1
USB1-207ENST00000563149 PRR5LQ6MZQ0 368 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 NFRKBQ6P4R8 1299 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 SND1Q7KZF4 910 aaKnown RBP eCLIP14.45□□□□□ -0.1
USB1-207ENST00000563149 TRIM59Q8IWR1 403 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 ADGRF4Q8IZF3 695 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 HAS1Q92839 578 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 MTMR8Q96EF0 704 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 GPR101Q96P66 508 aaPredicted RBP14.45□□□□□ -0.1
USB1-207ENST00000563149 TLR10Q9BXR5 811 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 TMEM51Q9NW97 253 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 DMGDHQ9UI17 866 aaKnown RBP14.45□□□□□ -0.1
USB1-207ENST00000563149 ATP6V0A2Q9Y487 856 aa14.45□□□□□ -0.1
USB1-207ENST00000563149 PITPNM2Q9BZ72 1349 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 GOLGA6CA6NDK9 693 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 GOLGA6DP0CG33 693 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 APBA1Q02410 837 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 RASSF7Q02833 373 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 GFPT1Q06210 699 aaPredicted RBP14.44□□□□□ -0.1
USB1-207ENST00000563149 LRRC41Q15345 812 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 NAB2Q15742 525 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 FAM83BQ5T0W9 1011 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 C10orf76Q5T2E6 689 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 HAUS3Q68CZ6 603 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 MCTP2Q6DN12 878 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 C8orf74Q6P047 294 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 PTF1AQ7RTS3 328 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 TMC4Q7Z404 712 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 GPCPD1Q9NPB8 672 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 GOLGA6AQ9NYA3 693 aa14.44□□□□□ -0.1
USB1-207ENST00000563149 AIPL1Q9NZN9 384 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms