RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 MRPS5P82675 430 aaKnown RBP19.38■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 SP2Q02086 613 aa19.38■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 TROAPQ12815 778 aa19.38■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 TCTN1Q2MV58 587 aa19.38■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 HSDL1Q3SXM5 330 aa19.38■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 SPRED2Q7Z698 418 aa19.38■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 TMCO2Q7Z6W1 182 aaPredicted RBP19.38■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 SAMD3Q8N6K7 520 aa19.38■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 GPKOWQ92917 476 aaPredicted RBP eCLIP19.38■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 WNT8BQ93098 351 aa19.38■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 ZFP91Q96JP5 570 aaPredicted RBP19.38■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 MTCH2Q9Y6C9 303 aa19.38■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 E7EWF7 191 aa19.37■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 CXCL10P02778 98 aa19.37■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 POU3F3P20264 500 aaPredicted RBP19.37■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 UBA1P22314 1058 aaKnown RBP19.37■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 HIC1Q14526 733 aa19.37■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 TRIM71Q2Q1W2 868 aaKnown RBP19.37■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 CELF3Q5SZQ8 465 aaKnown RBP19.37■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 TRAF7Q6Q0C0 670 aa19.37■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 ADAMTS19Q8TE59 1207 aa19.37■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 RUFY2Q8WXA3 655 aa19.37■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 SUPT16HQ9Y5B9 1047 aaKnown RBP19.37■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 COL4A4P53420 1690 aaPredicted RBP19.36■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 GCOM1H8Y6P7 765 aaPredicted RBP19.36■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 PPFIA4O75335 1185 aa19.36■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 GGPS1O95749 300 aa19.36■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 POLR2MP0CAP2 368 aa19.36■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 KCNJ6P48051 423 aa19.36■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 DEFB103AP81534 67 aa19.36■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 ZNF200P98182 395 aaPredicted RBP19.36■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 PTK7Q13308 1070 aa19.36■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 WTAPQ15007 396 aa19.36■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 KRT40Q6A162 431 aa19.36■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 CNKSR3Q6P9H4 555 aa19.36■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 KCNV1Q6PIU1 500 aa19.36■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 ARNTL2Q8WYA1 636 aa19.36■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 SPATA33Q96N06 139 aa19.36■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 PNMA6FA0A0J9YX94 578 aa19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 ERICH2A1L162 156 aa19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 LCHNA4D1U4 455 aa19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 KIF28PB7ZC32 967 aa19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 SGSM2O43147 1006 aa19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 TLL1O43897 1013 aa19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 PARNO95453 639 aaKnown RBP19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 ANTXR2P58335 489 aa19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 TFF2Q03403 129 aa19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 MBTPS1Q14703 1052 aa19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 ZNF618Q5T7W0 954 aa19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 RALYLQ86SE5 291 aaKnown RBP19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 FCHSD1Q86WN1 690 aa19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 NCOA7Q8NI08 942 aa19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 C16orf70Q9BSU1 422 aa19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 BCAS3Q9H6U6 928 aa19.35■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 FRMPD4Q14CM0 1322 aa19.34■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 TGFB3P10600 412 aa19.34■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 CCND2P30279 289 aa19.34■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 TRAF1Q13077 416 aa19.34■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 IGDCC4Q8TDY8 1250 aa19.34■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 TSPYL2Q9H2G4 693 aaPredicted RBP19.34■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 GTPBP6O43824 516 aaPredicted RBP19.33■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 LPXNO60711 386 aa19.33■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 MRPS9P82933 396 aaKnown RBP19.33■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 SART3Q15020 963 aaKnown RBP19.33■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 MB21D2Q8IYB1 491 aaPredicted RBP19.33■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 UHRF1Q96T88 793 aaPredicted RBP19.33■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 BAZ2BQ9UIF8 2168 aaKnown RBP19.33■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 GRB10Q13322 594 aa19.32■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 CATIPQ7Z7H3 387 aa19.32■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 SERINC5Q86VE9 423 aa19.32■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 PIBF1Q8WXW3 757 aa19.32■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 MAP4K1Q92918 833 aa19.32■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 MLXIPQ9HAP2 919 aa19.32■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 ABHD14A-ACY1A0A1B0GW23 586 aa19.31■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 GJB5O95377 273 aa19.31■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 BMP1P13497 986 aa19.31■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 HOXC8P31273 242 aa19.31■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 KCNQ1P51787 676 aa19.31■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 IRX6P78412 446 aaPredicted RBP19.31■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 SEMA3FQ13275 785 aa19.31■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 SKIV2LQ15477 1246 aaKnown RBP19.31■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 NECAB3Q96P71 396 aaPredicted RBP19.31■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 INPP4AQ96PE3 977 aaPredicted RBP19.31■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 ZBED2Q9BTP6 218 aa19.31■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 MYL10Q9BUA6 226 aa19.31■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 LY9Q9HBG7 655 aa19.31■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 PRRC2BQ5JSZ5 2229 aaKnown RBP19.31■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 DOCK5Q9H7D0 1870 aa19.31■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 H3BRB1 525 aa19.3■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 LGALS2P05162 132 aa19.3■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 ICAM3P32942 547 aa19.3■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 MKRN4PQ13434 485 aaPredicted RBP19.3■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 IKBKEQ14164 716 aa19.3■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 IL27Q8NEV9 243 aa19.3■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 TUT1Q9H6E5 874 aaKnown RBP19.3■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 RBM8AQ9Y5S9 174 aaKnown RBP19.3■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 BDP1A6H8Y1 2624 aa19.3■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 C17orf102A2RUQ5 167 aa19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 SPATA31C2B4DYI2 1134 aa19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 LGR5O75473 907 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms