RNA–Protein interactions for RNA: ENST00000562261.1

KLHDC4-208, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-208ENST00000562261 F2P00734 622 aa17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 ZNF286BP0CG31 522 aa17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 TGFB3P10600 412 aa17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 HOXD8P13378 290 aaPredicted RBP17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 UBA1P22314 1058 aaKnown RBP17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 LIFRP42702 1097 aa17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 GNAQP50148 359 aa17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 SP2Q02086 613 aa17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 CELF3Q5SZQ8 465 aaKnown RBP17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 MYSM1Q5VVJ2 828 aa17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 USP38Q8NB14 1042 aa17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 CAGE1Q8TC20 777 aa17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 ZFP91Q96JP5 570 aaPredicted RBP17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 CTAGE1Q96RT6 745 aa17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 SEC63Q9UGP8 760 aaKnown RBP17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 GTF2IRD1Q9UHL9 959 aa17.54■□□□□ 0.4
KLHDC4-208ENST00000562261 TRIP12Q14669 1992 aaPredicted RBP17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 SORBS3O60504 671 aa17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 PLEKHA8P1O95397 391 aa17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 CALM1P0DP23 149 aa17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 CALM2P0DP24 149 aa17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 CALM3P0DP25 149 aa17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 RXRAP19793 462 aa17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 PSEN2P49810 448 aa17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 MFSD10Q14728 455 aa17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 HSDL1Q3SXM5 330 aa17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 SRBD1Q8N5C6 995 aaKnown RBP17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 CCDC155Q8N6L0 562 aa17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 C7orf31Q8N865 590 aa17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 GPKOWQ92917 476 aaPredicted RBP eCLIP17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 SPATA33Q96N06 139 aa17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 ALG1Q9BT22 464 aa17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 HDAC6Q9UBN7 1215 aa17.53■□□□□ 0.4
KLHDC4-208ENST00000562261 HAS3O00219 553 aa17.52■□□□□ 0.4
KLHDC4-208ENST00000562261 PPFIA4O75335 1185 aa17.52■□□□□ 0.4
KLHDC4-208ENST00000562261 STAM2O75886 525 aa17.52■□□□□ 0.4
KLHDC4-208ENST00000562261 ACTN1P12814 892 aa17.52■□□□□ 0.4
KLHDC4-208ENST00000562261 MRPS9P82933 396 aaKnown RBP17.52■□□□□ 0.4
KLHDC4-208ENST00000562261 KIAA0753Q2KHM9 967 aa17.52■□□□□ 0.4
KLHDC4-208ENST00000562261 GNPTABQ3T906 1256 aa17.52■□□□□ 0.4
KLHDC4-208ENST00000562261 CMTR1Q8N1G2 835 aaKnown RBP17.52■□□□□ 0.4
KLHDC4-208ENST00000562261 SMARCC2Q8TAQ2 1214 aa17.52■□□□□ 0.4
KLHDC4-208ENST00000562261 AFAP1L1Q8TED9 768 aa17.52■□□□□ 0.4
KLHDC4-208ENST00000562261 CUL5Q93034 780 aa17.52■□□□□ 0.4
KLHDC4-208ENST00000562261 LRRC2Q9BYS8 371 aa17.52■□□□□ 0.4
KLHDC4-208ENST00000562261 NKX2-4Q9H2Z4 354 aa17.52■□□□□ 0.4
KLHDC4-208ENST00000562261 YBX2Q9Y2T7 364 aaKnown RBP17.52■□□□□ 0.4
KLHDC4-208ENST00000562261 SLC12A7Q9Y666 1083 aa17.52■□□□□ 0.4
KLHDC4-208ENST00000562261 PIK3CDO00329 1044 aa17.51■□□□□ 0.39
KLHDC4-208ENST00000562261 ATP2A2P16615 1042 aaKnown RBP17.51■□□□□ 0.39
KLHDC4-208ENST00000562261 RABGGTBP53611 331 aa17.51■□□□□ 0.39
KLHDC4-208ENST00000562261 RNF20Q5VTR2 975 aa17.51■□□□□ 0.39
KLHDC4-208ENST00000562261 USP17L6PQ6QN14 398 aa17.51■□□□□ 0.39
KLHDC4-208ENST00000562261 SGMS1Q86VZ5 419 aa17.51■□□□□ 0.39
KLHDC4-208ENST00000562261 DHX38Q92620 1227 aaKnown RBP17.51■□□□□ 0.39
KLHDC4-208ENST00000562261 INPP4AQ96PE3 977 aaPredicted RBP17.51■□□□□ 0.39
KLHDC4-208ENST00000562261 GAS2L1Q99501 681 aaPredicted RBP17.51■□□□□ 0.39
KLHDC4-208ENST00000562261 MLXIPQ9HAP2 919 aa17.51■□□□□ 0.39
KLHDC4-208ENST00000562261 SLC28A3Q9HAS3 691 aa17.51■□□□□ 0.39
KLHDC4-208ENST00000562261 TET1Q8NFU7 2136 aa17.5■□□□□ 0.39
KLHDC4-208ENST00000562261 MEIS2O14770 477 aa17.5■□□□□ 0.39
KLHDC4-208ENST00000562261 ICAM3P32942 547 aa17.5■□□□□ 0.39
KLHDC4-208ENST00000562261 RBL2Q08999 1139 aa17.5■□□□□ 0.39
KLHDC4-208ENST00000562261 RAB11FIP4Q86YS3 637 aa17.5■□□□□ 0.39
KLHDC4-208ENST00000562261 FTOQ9C0B1 505 aaKnown RBP eCLIP17.5■□□□□ 0.39
KLHDC4-208ENST00000562261 PRDM12Q9H4Q4 367 aa17.5■□□□□ 0.39
KLHDC4-208ENST00000562261 RTEL1Q9NZ71 1219 aa17.5■□□□□ 0.39
KLHDC4-208ENST00000562261 PCDHA11Q9Y5I1 949 aa17.5■□□□□ 0.39
KLHDC4-208ENST00000562261 MYOGP15173 224 aa17.49■□□□□ 0.39
KLHDC4-208ENST00000562261 SELPP16109 830 aa17.49■□□□□ 0.39
KLHDC4-208ENST00000562261 SEMA3FQ13275 785 aa17.49■□□□□ 0.39
KLHDC4-208ENST00000562261 PTK7Q13308 1070 aa17.49■□□□□ 0.39
KLHDC4-208ENST00000562261 NEDD9Q14511 834 aa17.49■□□□□ 0.39
KLHDC4-208ENST00000562261 PCNX4Q63HM2 1172 aa17.49■□□□□ 0.39
KLHDC4-208ENST00000562261 LRRC8DQ7L1W4 858 aa17.49■□□□□ 0.39
KLHDC4-208ENST00000562261 MICU3Q86XE3 530 aa17.49■□□□□ 0.39
KLHDC4-208ENST00000562261 FANCBQ8NB91 859 aa17.49■□□□□ 0.39
KLHDC4-208ENST00000562261 PPM1EQ8WY54 764 aa17.49■□□□□ 0.39
KLHDC4-208ENST00000562261 NEK1Q96PY6 1258 aa17.49■□□□□ 0.39
KLHDC4-208ENST00000562261 SLC9A7Q96T83 725 aa17.49■□□□□ 0.39
KLHDC4-208ENST00000562261 C16orf70Q9BSU1 422 aa17.49■□□□□ 0.39
KLHDC4-208ENST00000562261 DOCK5Q9H7D0 1870 aa17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 MYO9BQ13459 2157 aa17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 SPATA31C2B4DYI2 1134 aa17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 FIBPO43427 364 aa17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 CDC45O75419 566 aa17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 BAIAP3O94812 1187 aa17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 PARNO95453 639 aaKnown RBP17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 NEFLP07196 543 aa17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 CKBP12277 381 aa17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 GPNMBQ14956 572 aa17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 PPP2R2DQ66LE6 453 aa17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 XRRA1Q6P2D8 792 aa17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 METTL7BQ6UX53 244 aa17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 TMTC3Q6ZXV5 915 aa17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 BCAS3Q9H6U6 928 aa17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 PSTPIP2Q9H939 334 aa17.48■□□□□ 0.39
KLHDC4-208ENST00000562261 hCG_1642624A0A1W2PR95 340 aa17.47■□□□□ 0.39
KLHDC4-208ENST00000562261 NOP56O00567 594 aaKnown RBP17.47■□□□□ 0.39
KLHDC4-208ENST00000562261 LGALS2P05162 132 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms