RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 IGDCC4Q8TDY8 1250 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 GPKOWQ92917 476 aaPredicted RBP eCLIP9.55□□□□□ -0.88
GINS3-204ENST00000561952 MTMR8Q96EF0 704 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 IWS1Q96ST2 819 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 PDCD2LQ9BRP1 358 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 PBX4Q9BYU1 374 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 RIOX1Q9H6W3 641 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 DDX41Q9UJV9 622 aaKnown RBP9.55□□□□□ -0.88
GINS3-204ENST00000561952 TET1Q8NFU7 2136 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 PNMA6FA0A0J9YX94 578 aa9.54□□□□□ -0.88
GINS3-204ENST00000561952 hCG_1642624A0A1W2PR95 340 aa9.54□□□□□ -0.88
GINS3-204ENST00000561952 SH2B2O14492 632 aaPredicted RBP9.54□□□□□ -0.88
GINS3-204ENST00000561952 EIF3JO75822 258 aaKnown RBP9.54□□□□□ -0.88
GINS3-204ENST00000561952 SUPT20HL2P0C7V6 817 aa9.54□□□□□ -0.88
GINS3-204ENST00000561952 CCND2P30279 289 aa9.54□□□□□ -0.88
GINS3-204ENST00000561952 MCM5P33992 734 aa9.54□□□□□ -0.88
GINS3-204ENST00000561952 PTGISQ16647 500 aa9.54□□□□□ -0.88
GINS3-204ENST00000561952 GDF6Q6KF10 455 aaPredicted RBP9.54□□□□□ -0.88
GINS3-204ENST00000561952 MICU3Q86XE3 530 aa9.54□□□□□ -0.88
GINS3-204ENST00000561952 DHX37Q8IY37 1157 aaKnown RBP9.54□□□□□ -0.88
GINS3-204ENST00000561952 CCDC82Q8N4S0 544 aa9.54□□□□□ -0.88
GINS3-204ENST00000561952 PPM1EQ8WY54 764 aa9.54□□□□□ -0.88
GINS3-204ENST00000561952 HERVK_113Q902F9 699 aa9.54□□□□□ -0.88
GINS3-204ENST00000561952 RRP36Q96EU6 259 aaKnown RBP9.54□□□□□ -0.88
GINS3-204ENST00000561952 TCEANC2Q96MN5 208 aa9.54□□□□□ -0.88
GINS3-204ENST00000561952 FTOQ9C0B1 505 aaKnown RBP eCLIP9.54□□□□□ -0.88
GINS3-204ENST00000561952 MTIF3Q9H2K0 278 aaKnown RBP9.54□□□□□ -0.88
GINS3-204ENST00000561952 NKX2-4Q9H2Z4 354 aa9.54□□□□□ -0.88
GINS3-204ENST00000561952 ZNF576Q9H609 170 aa9.54□□□□□ -0.88
GINS3-204ENST00000561952 SEC63Q9UGP8 760 aaKnown RBP9.54□□□□□ -0.88
GINS3-204ENST00000561952 PCDHB8Q9UN66 801 aa9.54□□□□□ -0.88
GINS3-204ENST00000561952 PTPRSQ13332 1948 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 KPNA6O60684 536 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 DDAH1O94760 285 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 GGPS1O95749 300 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 MYOGP15173 224 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 CASTP20810 708 aaKnown RBP9.53□□□□□ -0.88
GINS3-204ENST00000561952 UBA1P22314 1058 aaKnown RBP9.53□□□□□ -0.88
GINS3-204ENST00000561952 PSEN2P49810 448 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 SP4Q02446 784 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 MFSD10Q14728 455 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 DGKDQ16760 1214 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 NFRKBQ6P4R8 1299 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 USP17L6PQ6QN14 398 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 CENPQQ7L2Z9 268 aaPredicted RBP9.53□□□□□ -0.88
GINS3-204ENST00000561952 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.53□□□□□ -0.88
GINS3-204ENST00000561952 RPUSD2Q8IZ73 545 aaKnown RBP9.53□□□□□ -0.88
GINS3-204ENST00000561952 RETREG2Q8NC44 543 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 SMARCC2Q8TAQ2 1214 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 KAT2BQ92831 832 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 SPATA33Q96N06 139 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 SEZ6LQ9BYH1 1024 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 PRDM12Q9H4Q4 367 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 RTEL1Q9NZ71 1219 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 MSRAQ9UJ68 235 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 NAP1L2Q9ULW6 460 aaPredicted RBP9.53□□□□□ -0.88
GINS3-204ENST00000561952 YBX2Q9Y2T7 364 aaKnown RBP9.53□□□□□ -0.88
GINS3-204ENST00000561952 SLC4A7Q9Y6M7 1214 aa9.53□□□□□ -0.88
GINS3-204ENST00000561952 CHD7Q9P2D1 2997 aa9.52□□□□□ -0.88
GINS3-204ENST00000561952 CHD9Q3L8U1 2897 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 RGS20O76081 388 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 KIF5BP33176 963 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 SP2Q02086 613 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 BFSP2Q13515 415 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 LAMC2Q13753 1193 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 UBE2SQ16763 222 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 KIAA0753Q2KHM9 967 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 HSDL1Q3SXM5 330 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 RASIP1Q5U651 963 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 MICALL1Q8N3F8 863 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 SRBD1Q8N5C6 995 aaKnown RBP9.52□□□□□ -0.89
GINS3-204ENST00000561952 C7orf31Q8N865 590 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 CUL5Q93034 780 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 BCAS3Q9H6U6 928 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 MLXIPQ9HAP2 919 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 HDAC6Q9UBN7 1215 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 SLC12A7Q9Y666 1083 aa9.52□□□□□ -0.89
GINS3-204ENST00000561952 TMEM265A0A087WTH1 108 aa9.51□□□□□ -0.89
GINS3-204ENST00000561952 NOP56O00567 594 aaKnown RBP9.51□□□□□ -0.89
GINS3-204ENST00000561952 IQCF3P0C7M6 154 aa9.51□□□□□ -0.89
GINS3-204ENST00000561952 ATP2A2P16615 1042 aaKnown RBP9.51□□□□□ -0.89
GINS3-204ENST00000561952 IGFBP4P22692 258 aa9.51□□□□□ -0.89
GINS3-204ENST00000561952 MRPS9P82933 396 aaKnown RBP9.51□□□□□ -0.89
GINS3-204ENST00000561952 ZNF200P98182 395 aaPredicted RBP9.51□□□□□ -0.89
GINS3-204ENST00000561952 GHRHRQ02643 423 aa9.51□□□□□ -0.89
GINS3-204ENST00000561952 PTPN11Q06124 597 aaPredicted RBP9.51□□□□□ -0.89
GINS3-204ENST00000561952 TRAF1Q13077 416 aa9.51□□□□□ -0.89
GINS3-204ENST00000561952 NECTIN1Q15223 517 aa9.51□□□□□ -0.89
GINS3-204ENST00000561952 RAB30Q15771 203 aa9.51□□□□□ -0.89
GINS3-204ENST00000561952 CCDC85BQ15834 202 aaPredicted RBP9.51□□□□□ -0.89
GINS3-204ENST00000561952 BMP2KLQ5H9B9 411 aa9.51□□□□□ -0.89
GINS3-204ENST00000561952 CELF3Q5SZQ8 465 aaKnown RBP9.51□□□□□ -0.89
GINS3-204ENST00000561952 MYSM1Q5VVJ2 828 aa9.51□□□□□ -0.89
GINS3-204ENST00000561952 PPP2R2DQ66LE6 453 aa9.51□□□□□ -0.89
GINS3-204ENST00000561952 HEATR3Q7Z4Q2 680 aa9.51□□□□□ -0.89
GINS3-204ENST00000561952 VSIG10LQ86VR7 867 aa9.51□□□□□ -0.89
GINS3-204ENST00000561952 PDCD7Q8N8D1 485 aaKnown RBP9.51□□□□□ -0.89
GINS3-204ENST00000561952 USP38Q8NB14 1042 aa9.51□□□□□ -0.89
GINS3-204ENST00000561952 PPTC7Q8NI37 304 aa9.51□□□□□ -0.89
GINS3-204ENST00000561952 VWCEQ96DN2 955 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms