RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 FRMPD4Q14CM0 1322 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 BAZ2BQ9UIF8 2168 aaKnown RBP11.87□□□□□ -0.51
CLK3-205ENST00000561673 hCG_1642624A0A1W2PR95 340 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 PIK3CDO00329 1044 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 MEIS2O14770 477 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 PPFIA4O75335 1185 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 CDC45O75419 566 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 GGPS1O95749 300 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 IQCF3P0C7M6 154 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 ZNF286BP0CG31 522 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 HOXD8P13378 290 aaPredicted RBP11.87□□□□□ -0.51
CLK3-205ENST00000561673 UBA1P22314 1058 aaKnown RBP11.87□□□□□ -0.51
CLK3-205ENST00000561673 EXOSC10Q01780 885 aaKnown RBP11.87□□□□□ -0.51
CLK3-205ENST00000561673 GRIN2CQ14957 1233 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 PTGISQ16647 500 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 ADCK5Q3MIX3 580 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 HSDL1Q3SXM5 330 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 TSGA10IPQ3SY00 556 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 DEFB128Q7Z7B8 93 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 SESTD1Q86VW0 696 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 SGMS1Q86VZ5 419 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 MYLIPQ8WY64 445 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 CCDC136Q96JN2 1154 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 SPATA33Q96N06 139 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 ZNF576Q9H609 170 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 BCAS3Q9H6U6 928 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 RTEL1Q9NZ71 1219 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 HDAC6Q9UBN7 1215 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 NOD1Q9Y239 953 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 SCN10AQ9Y5Y9 1956 aa11.87□□□□□ -0.51
CLK3-205ENST00000561673 MYH6P13533 1939 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 PITPNM1O00562 1244 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 F2P00734 622 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 PSEN2P49810 448 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 BFSP2Q13515 415 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 MFSD10Q14728 455 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 KIAA0753Q2KHM9 967 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 TMTC3Q6ZXV5 915 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 DHX32Q7L7V1 743 aaKnown RBP11.86□□□□□ -0.51
CLK3-205ENST00000561673 MICU3Q86XE3 530 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 C7orf31Q8N865 590 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 RETREG2Q8NC44 543 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 SMARCC2Q8TAQ2 1214 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 SPOCK2Q92563 424 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 CUL5Q93034 780 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 TCEANC2Q96MN5 208 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 INPP4AQ96PE3 977 aaPredicted RBP11.86□□□□□ -0.51
CLK3-205ENST00000561673 ALG1Q9BT22 464 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 KATNAL1Q9BW62 490 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 MTIF3Q9H2K0 278 aaKnown RBP11.86□□□□□ -0.51
CLK3-205ENST00000561673 PSTPIP2Q9H939 334 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 MLXIPQ9HAP2 919 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 GTF2IRD1Q9UHL9 959 aa11.86□□□□□ -0.51
CLK3-205ENST00000561673 SPATA31C2B4DYI2 1134 aa11.85□□□□□ -0.51
CLK3-205ENST00000561673 HAS3O00219 553 aa11.85□□□□□ -0.51
CLK3-205ENST00000561673 STAM2O75886 525 aa11.85□□□□□ -0.51
CLK3-205ENST00000561673 PFKMP08237 780 aa11.85□□□□□ -0.51
CLK3-205ENST00000561673 ICAM3P32942 547 aa11.85□□□□□ -0.51
CLK3-205ENST00000561673 RFC2P35250 354 aa11.85□□□□□ -0.51
CLK3-205ENST00000561673 SEMA3FQ13275 785 aa11.85□□□□□ -0.51
CLK3-205ENST00000561673 GNPTABQ3T906 1256 aa11.85□□□□□ -0.51
CLK3-205ENST00000561673 PCNX4Q63HM2 1172 aa11.85□□□□□ -0.51
CLK3-205ENST00000561673 APOA5Q6Q788 366 aa11.85□□□□□ -0.51
CLK3-205ENST00000561673 SYNE3Q6ZMZ3 975 aa11.85□□□□□ -0.51
CLK3-205ENST00000561673 DHX38Q92620 1227 aaKnown RBP11.85□□□□□ -0.51
CLK3-205ENST00000561673 BRPF3Q9ULD4 1205 aa11.85□□□□□ -0.51
CLK3-205ENST00000561673 SLC4A7Q9Y6M7 1214 aa11.85□□□□□ -0.51
CLK3-205ENST00000561673 KIAA1217Q5T5P2 1943 aa11.84□□□□□ -0.51
CLK3-205ENST00000561673 ZBBXA8MT70 800 aa11.84□□□□□ -0.51
CLK3-205ENST00000561673 RABGGTBP53611 331 aa11.84□□□□□ -0.51
CLK3-205ENST00000561673 ZNF200P98182 395 aaPredicted RBP11.84□□□□□ -0.51
CLK3-205ENST00000561673 HIC1Q14526 733 aa11.84□□□□□ -0.51
CLK3-205ENST00000561673 KRT32Q14532 448 aa11.84□□□□□ -0.51
CLK3-205ENST00000561673 GPNMBQ14956 572 aa11.84□□□□□ -0.51
CLK3-205ENST00000561673 XRRA1Q6P2D8 792 aa11.84□□□□□ -0.51
CLK3-205ENST00000561673 CYFIP1Q7L576 1253 aa11.84□□□□□ -0.51
CLK3-205ENST00000561673 MAFAQ8NHW3 353 aaPredicted RBP11.84□□□□□ -0.51
CLK3-205ENST00000561673 CAGE1Q8TC20 777 aa11.84□□□□□ -0.51
CLK3-205ENST00000561673 C16orf70Q9BSU1 422 aa11.84□□□□□ -0.51
CLK3-205ENST00000561673 FTOQ9C0B1 505 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLK3-205ENST00000561673 MSRAQ9UJ68 235 aa11.84□□□□□ -0.51
CLK3-205ENST00000561673 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
CLK3-205ENST00000561673 YBX2Q9Y2T7 364 aaKnown RBP11.84□□□□□ -0.51
CLK3-205ENST00000561673 SPTBN5Q9NRC6 3674 aaKnown RBP11.84□□□□□ -0.51
CLK3-205ENST00000561673 XIRP2A4UGR9 3374 aa11.83□□□□□ -0.52
CLK3-205ENST00000561673 ZBTB43O43298 467 aa11.83□□□□□ -0.52
CLK3-205ENST00000561673 FIBPO43427 364 aa11.83□□□□□ -0.52
CLK3-205ENST00000561673 CKBP12277 381 aa11.83□□□□□ -0.52
CLK3-205ENST00000561673 CPA1P15085 419 aa11.83□□□□□ -0.52
CLK3-205ENST00000561673 MYOGP15173 224 aa11.83□□□□□ -0.52
CLK3-205ENST00000561673 FOSL2P15408 326 aa11.83□□□□□ -0.52
CLK3-205ENST00000561673 ATP2A2P16615 1042 aaKnown RBP11.83□□□□□ -0.52
CLK3-205ENST00000561673 FUT2Q10981 343 aa11.83□□□□□ -0.52
CLK3-205ENST00000561673 NEDD9Q14511 834 aa11.83□□□□□ -0.52
CLK3-205ENST00000561673 RAB30Q15771 203 aa11.83□□□□□ -0.52
CLK3-205ENST00000561673 UBE2SQ16763 222 aa11.83□□□□□ -0.52
CLK3-205ENST00000561673 METTL7BQ6UX53 244 aa11.83□□□□□ -0.52
CLK3-205ENST00000561673 HEATR3Q7Z4Q2 680 aa11.83□□□□□ -0.52
CLK3-205ENST00000561673 CCDC155Q8N6L0 562 aa11.83□□□□□ -0.52
CLK3-205ENST00000561673 AFAP1L1Q8TED9 768 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms