RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 TGFB3P10600 412 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 AKR1A1P14550 325 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 ATP2B1P20020 1258 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 CIITAP33076 1130 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 LY6KQ17RY6 165 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 LETM2Q2VYF4 491 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 GNPTABQ3T906 1256 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 TMEM63BQ5T3F8 832 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 CCDC62Q6P9F0 684 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 KCNV1Q6PIU1 500 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 NLRX1Q86UT6 975 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 FERMT3Q86UX7 667 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 KCNH7Q9NS40 1196 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 DDX41Q9UJV9 622 aaKnown RBP11.69□□□□□ -0.54
LRRC28-221ENST00000561276 MTMR6Q9Y217 621 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 MRVI1Q9Y6F6 885 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 IGLV3-22A0A075B6J6 115 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 CYP3A7-CYP3A51PA0A087WV96 503 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 ADCY6O43306 1168 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 CCNT1O60563 726 aaKnown RBP11.68□□□□□ -0.54
LRRC28-221ENST00000561276 ATP9AO75110 1047 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 ARIH2O95376 493 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 ARP10275 920 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 SMPD1P17405 629 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 CYP3A7P24462 503 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 ICAM3P32942 547 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 SP2Q02086 613 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 MTMR1Q13613 665 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 TTLL4Q14679 1199 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 DUSP28Q4G0W2 176 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 PRR16Q569H4 304 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 ANO1Q5XXA6 986 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 PPP4R3AQ6IN85 833 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 NIPA1Q7RTP0 329 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 PLA2G4DQ86XP0 818 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 GPRASP2Q96D09 838 aa11.68□□□□□ -0.54
LRRC28-221ENST00000561276 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.68□□□□□ -0.54
LRRC28-221ENST00000561276 WNT7AO00755 349 aa11.67□□□□□ -0.54
LRRC28-221ENST00000561276 FIBPO43427 364 aa11.67□□□□□ -0.54
LRRC28-221ENST00000561276 TDP2O95551 362 aa11.67□□□□□ -0.54
LRRC28-221ENST00000561276 ZSCAN22P10073 491 aaPredicted RBP11.67□□□□□ -0.54
LRRC28-221ENST00000561276 CD44P16070 742 aaKnown RBP11.67□□□□□ -0.54
LRRC28-221ENST00000561276 TOB1P50616 345 aaPredicted RBP11.67□□□□□ -0.54
LRRC28-221ENST00000561276 SEMA3FQ13275 785 aa11.67□□□□□ -0.54
LRRC28-221ENST00000561276 PKP1Q13835 747 aa11.67□□□□□ -0.54
LRRC28-221ENST00000561276 Q4G0T1 1027 aa11.67□□□□□ -0.54
LRRC28-221ENST00000561276 GJC2Q5T442 439 aaPredicted RBP11.67□□□□□ -0.54
LRRC28-221ENST00000561276 FOXD4L5Q5VV16 416 aaPredicted RBP11.67□□□□□ -0.54
LRRC28-221ENST00000561276 LHX8Q68G74 356 aa11.67□□□□□ -0.54
LRRC28-221ENST00000561276 MOXD1Q6UVY6 613 aa11.67□□□□□ -0.54
LRRC28-221ENST00000561276 BRAPQ7Z569 592 aa11.67□□□□□ -0.54
LRRC28-221ENST00000561276 FOXD4L4Q8WXT5 416 aaPredicted RBP11.67□□□□□ -0.54
LRRC28-221ENST00000561276 COPS5Q92905 334 aa11.67□□□□□ -0.54
LRRC28-221ENST00000561276 CDHR1Q96JP9 859 aa11.67□□□□□ -0.54
LRRC28-221ENST00000561276 DEFB118Q96PH6 123 aa11.67□□□□□ -0.54
LRRC28-221ENST00000561276 UIMC1Q96RL1 719 aa11.67□□□□□ -0.54
LRRC28-221ENST00000561276 NAP1L4Q99733 375 aaKnown RBP11.67□□□□□ -0.54
LRRC28-221ENST00000561276 ZSCAN16Q9H4T2 348 aaPredicted RBP11.67□□□□□ -0.54
LRRC28-221ENST00000561276 BCAS3Q9H6U6 928 aa11.67□□□□□ -0.54
LRRC28-221ENST00000561276 PAK6Q9NQU5 681 aaPredicted RBP11.67□□□□□ -0.54
LRRC28-221ENST00000561276 DDX20Q9UHI6 824 aaKnown RBP11.67□□□□□ -0.54
LRRC28-221ENST00000561276 NOL7Q9UMY1 257 aaKnown RBP11.67□□□□□ -0.54
LRRC28-221ENST00000561276 GNEQ9Y223 722 aaKnown RBP11.67□□□□□ -0.54
LRRC28-221ENST00000561276 CENPFP49454 3210 aa11.67□□□□□ -0.54
LRRC28-221ENST00000561276 HTTP42858 3142 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 NKRFO15226 690 aaKnown RBP eCLIP11.66□□□□□ -0.54
LRRC28-221ENST00000561276 DYNC1LI2O43237 492 aaPredicted RBP11.66□□□□□ -0.54
LRRC28-221ENST00000561276 MSCO60682 206 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 DUSP11O75319 330 aaKnown RBP11.66□□□□□ -0.54
LRRC28-221ENST00000561276 RARBP10826 455 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 GCFC2P16383 781 aaKnown RBP11.66□□□□□ -0.54
LRRC28-221ENST00000561276 PTGS1P23219 599 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 MCM7P33993 719 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 TRAPPC10P48553 1259 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 RESTQ13127 1097 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 ZNF174Q15697 407 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 RILPL1Q5EBL4 403 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 DHX37Q8IY37 1157 aaKnown RBP11.66□□□□□ -0.54
LRRC28-221ENST00000561276 LENG9Q96B70 501 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 LENG1Q96BZ8 264 aaPredicted RBP11.66□□□□□ -0.54
LRRC28-221ENST00000561276 MBOAT7Q96N66 472 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 IPO9Q96P70 1041 aaKnown RBP11.66□□□□□ -0.54
LRRC28-221ENST00000561276 SENP7Q9BQF6 1050 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 ZNF577Q9BSK1 485 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 TMEM106CQ9BVX2 250 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 AGO4Q9HCK5 861 aaKnown RBP11.66□□□□□ -0.54
LRRC28-221ENST00000561276 PKD2L1Q9P0L9 805 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 DDX25Q9UHL0 483 aaKnown RBP11.66□□□□□ -0.54
LRRC28-221ENST00000561276 Q9Y3F1 56 aa11.66□□□□□ -0.54
LRRC28-221ENST00000561276 WDR81Q562E7 1941 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 POTEFA5A3E0 1075 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 IPO5O00410 1097 aaKnown RBP11.65□□□□□ -0.54
LRRC28-221ENST00000561276 MSH4O15457 936 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 SLC37A4O43826 429 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 SORBS3O60504 671 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 SGPL1O95470 568 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 BRD1O95696 1058 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 GGPS1O95749 300 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 F13A1P00488 732 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 GH1P01241 217 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms